RNA–Protein interactions for RNA: ENST00000590472.5

GCDH-211, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-211ENST00000590472 GPBP1L1Q9HC44 474 aaPredicted RBP20.7■□□□□ 0.9
GCDH-211ENST00000590472 CCDC88AQ3V6T2 1871 aa20.7■□□□□ 0.9
GCDH-211ENST00000590472 NLRP10Q86W26 655 aa20.69■□□□□ 0.9
GCDH-211ENST00000590472 C7orf43Q8WVR3 580 aa20.69■□□□□ 0.9
GCDH-211ENST00000590472 UTP14AQ9BVJ6 771 aaKnown RBP20.69■□□□□ 0.9
GCDH-211ENST00000590472 PHAXQ9H814 394 aaKnown RBP20.69■□□□□ 0.9
GCDH-211ENST00000590472 LMNB1P20700 586 aa20.68■□□□□ 0.9
GCDH-211ENST00000590472 WDR63Q8IWG1 891 aa20.68■□□□□ 0.9
GCDH-211ENST00000590472 CCDC30Q5VVM6 783 aa20.67■□□□□ 0.9
GCDH-211ENST00000590472 C3orf67Q6ZVT6 689 aa20.67■□□□□ 0.9
GCDH-211ENST00000590472 ALDH1B1P30837 517 aa20.66■□□□□ 0.9
GCDH-211ENST00000590472 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
GCDH-211ENST00000590472 ISCA1Q9BUE6 129 aa20.66■□□□□ 0.9
GCDH-211ENST00000590472 RNF123Q5XPI4 1314 aa20.66■□□□□ 0.9
GCDH-211ENST00000590472 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
GCDH-211ENST00000590472 TIAM2Q8IVF5 1701 aa20.66■□□□□ 0.9
GCDH-211ENST00000590472 LAMB2P55268 1798 aa20.65■□□□□ 0.9
GCDH-211ENST00000590472 LTBP3Q9NS15 1303 aa20.65■□□□□ 0.9
GCDH-211ENST00000590472 HOXA10P31260 410 aaPredicted RBP20.65■□□□□ 0.9
GCDH-211ENST00000590472 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
GCDH-211ENST00000590472 SOGA3Q5TF21 947 aa20.65■□□□□ 0.9
GCDH-211ENST00000590472 SYNE4Q8N205 404 aa20.65■□□□□ 0.9
GCDH-211ENST00000590472 CHMP4AQ9BY43 222 aa20.65■□□□□ 0.9
GCDH-211ENST00000590472 C1QTNF8P60827 252 aa20.64■□□□□ 0.89
GCDH-211ENST00000590472 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.89
GCDH-211ENST00000590472 DICER1Q9UPY3 1922 aaKnown RBP20.64■□□□□ 0.89
GCDH-211ENST00000590472 ATP5J2-PTCD1G3V325 749 aa20.63■□□□□ 0.89
GCDH-211ENST00000590472 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
GCDH-211ENST00000590472 OLFM4Q6UX06 510 aa20.63■□□□□ 0.89
GCDH-211ENST00000590472 RPGRQ92834 1020 aaKnown RBP20.63■□□□□ 0.89
GCDH-211ENST00000590472 NLRP3Q96P20 1036 aa20.63■□□□□ 0.89
GCDH-211ENST00000590472 TAOK3Q9H2K8 898 aa20.63■□□□□ 0.89
GCDH-211ENST00000590472 TRMT112Q9UI30 125 aaKnown RBP20.63■□□□□ 0.89
GCDH-211ENST00000590472 DDX60Q8IY21 1712 aaKnown RBP20.62■□□□□ 0.89
GCDH-211ENST00000590472 SH3TC1Q8TE82 1336 aa20.62■□□□□ 0.89
GCDH-211ENST00000590472 ZC3H4Q9UPT8 1303 aaKnown RBP20.62■□□□□ 0.89
GCDH-211ENST00000590472 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
GCDH-211ENST00000590472 KIF3CO14782 793 aa20.62■□□□□ 0.89
GCDH-211ENST00000590472 CCDC93Q567U6 631 aa20.62■□□□□ 0.89
GCDH-211ENST00000590472 RIC3Q7Z5B4 369 aa20.62■□□□□ 0.89
GCDH-211ENST00000590472 ZNF428Q96B54 188 aa20.62■□□□□ 0.89
GCDH-211ENST00000590472 SNED1Q8TER0 1413 aa20.61■□□□□ 0.89
GCDH-211ENST00000590472 HCLS1P14317 486 aaPredicted RBP20.61■□□□□ 0.89
GCDH-211ENST00000590472 TRIM28Q13263 835 aaKnown RBP20.61■□□□□ 0.89
GCDH-211ENST00000590472 CRAMP1Q96RY5 1269 aa20.61■□□□□ 0.89
GCDH-211ENST00000590472 ZNF521Q96K83 1311 aa20.6■□□□□ 0.89
GCDH-211ENST00000590472 RBM17Q96I25 401 aaKnown RBP20.6■□□□□ 0.89
GCDH-211ENST00000590472 NMRK2Q9NPI5 230 aa20.6■□□□□ 0.89
GCDH-211ENST00000590472 EXOSC9Q06265 439 aaKnown RBP20.59■□□□□ 0.89
GCDH-211ENST00000590472 FAM89AQ96GI7 184 aa20.59■□□□□ 0.89
GCDH-211ENST00000590472 STK31Q9BXU1 1019 aa20.59■□□□□ 0.89
GCDH-211ENST00000590472 VAMP4O75379 141 aa20.58■□□□□ 0.89
GCDH-211ENST00000590472 FKBP4Q02790 459 aaKnown RBP eCLIP20.58■□□□□ 0.89
GCDH-211ENST00000590472 G2E3Q7L622 706 aa20.58■□□□□ 0.89
GCDH-211ENST00000590472 SLC51AQ86UW1 340 aa20.58■□□□□ 0.89
GCDH-211ENST00000590472 RTKN2Q8IZC4 609 aa20.58■□□□□ 0.89
GCDH-211ENST00000590472 KDM2BQ8NHM5 1336 aa20.57■□□□□ 0.88
GCDH-211ENST00000590472 CCER2I3L3R5 266 aa20.57■□□□□ 0.88
GCDH-211ENST00000590472 DDX58O95786 925 aaKnown RBP20.57■□□□□ 0.88
GCDH-211ENST00000590472 SLC4A2P04920 1241 aa20.57■□□□□ 0.88
GCDH-211ENST00000590472 MYD88Q99836 296 aa20.57■□□□□ 0.88
GCDH-211ENST00000590472 METTL22Q9BUU2 404 aaPredicted RBP20.57■□□□□ 0.88
GCDH-211ENST00000590472 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
GCDH-211ENST00000590472 ABCC4O15439 1325 aa20.56■□□□□ 0.88
GCDH-211ENST00000590472 KSR2Q6VAB6 950 aa20.56■□□□□ 0.88
GCDH-211ENST00000590472 MAP3K2Q9Y2U5 619 aa20.56■□□□□ 0.88
GCDH-211ENST00000590472 CACNA1FO60840 1977 aa20.55■□□□□ 0.88
GCDH-211ENST00000590472 PI4KAP2A4QPH2 592 aa20.55■□□□□ 0.88
GCDH-211ENST00000590472 GLTPD2A6NH11 291 aa20.55■□□□□ 0.88
GCDH-211ENST00000590472 PPEF1O14829 653 aaPredicted RBP20.55■□□□□ 0.88
GCDH-211ENST00000590472 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
GCDH-211ENST00000590472 CC2D2BQ6DHV5 1058 aa20.55■□□□□ 0.88
GCDH-211ENST00000590472 PI4KAP1Q8N8J0 262 aa20.55■□□□□ 0.88
GCDH-211ENST00000590472 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
GCDH-211ENST00000590472 TAF1P21675 1872 aa20.55■□□□□ 0.88
GCDH-211ENST00000590472 ZBTB38Q8NAP3 1195 aaPredicted RBP20.54■□□□□ 0.88
GCDH-211ENST00000590472 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
GCDH-211ENST00000590472 PSMD1Q99460 953 aa20.53■□□□□ 0.88
GCDH-211ENST00000590472 RRAGCQ9HB90 399 aa20.53■□□□□ 0.88
GCDH-211ENST00000590472 IRS4O14654 1257 aaPredicted RBP20.52■□□□□ 0.88
GCDH-211ENST00000590472 IGKV5-2P06315 115 aa20.52■□□□□ 0.88
GCDH-211ENST00000590472 FLIIQ13045 1269 aa20.52■□□□□ 0.88
GCDH-211ENST00000590472 SF3B3Q15393 1217 aaKnown RBP20.52■□□□□ 0.88
GCDH-211ENST00000590472 CWC25Q9NXE8 425 aaPredicted RBP20.52■□□□□ 0.88
GCDH-211ENST00000590472 ATP6V0A2Q9Y487 856 aa20.52■□□□□ 0.88
GCDH-211ENST00000590472 WDR90Q96KV7 1748 aa20.52■□□□□ 0.88
GCDH-211ENST00000590472 COL4A1P02462 1669 aa20.51■□□□□ 0.87
GCDH-211ENST00000590472 BBOX1O75936 387 aa20.51■□□□□ 0.87
GCDH-211ENST00000590472 PCCAP05165 728 aaPredicted RBP20.51■□□□□ 0.87
GCDH-211ENST00000590472 GRIPAP1Q4V328 841 aa20.51■□□□□ 0.87
GCDH-211ENST00000590472 DDX46Q7L014 1031 aaKnown RBP20.51■□□□□ 0.87
GCDH-211ENST00000590472 TOMM70O94826 608 aa20.5■□□□□ 0.87
GCDH-211ENST00000590472 IARSP41252 1262 aaKnown RBP20.5■□□□□ 0.87
GCDH-211ENST00000590472 GRAPQ13588 217 aa20.5■□□□□ 0.87
GCDH-211ENST00000590472 DPY19L2Q6NUT2 758 aa20.5■□□□□ 0.87
GCDH-211ENST00000590472 GRAPLQ8TC17 118 aaPredicted RBP20.5■□□□□ 0.87
GCDH-211ENST00000590472 COL4A5P29400 1685 aa20.5■□□□□ 0.87
GCDH-211ENST00000590472 SP8Q8IXZ3 490 aa20.49■□□□□ 0.87
GCDH-211ENST00000590472 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
GCDH-211ENST00000590472 LRRC37AA6NMS7 1700 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms