RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 WWC3Q9ULE0 1092 aa21.39■■□□□ 1.01
LSM14A-208ENST00000590416 PDE6BP35913 854 aa21.38■■□□□ 1.01
LSM14A-208ENST00000590416 TGFB2P61812 414 aa21.38■■□□□ 1.01
LSM14A-208ENST00000590416 CWC25Q9NXE8 425 aaPredicted RBP21.38■■□□□ 1.01
LSM14A-208ENST00000590416 KIF16BQ96L93 1317 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 A0A0G2JLW4 131 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 BCAR3O75815 825 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 DPEP1P16444 411 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 CWF19L2Q2TBE0 894 aaKnown RBP21.37■■□□□ 1.01
LSM14A-208ENST00000590416 RTL5Q5HYW3 569 aaPredicted RBP21.37■■□□□ 1.01
LSM14A-208ENST00000590416 C2CD5Q86YS7 1000 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 CCDC191Q8NCU4 936 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 BRIP1Q9BX63 1249 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 NOB1Q9ULX3 412 aaKnown RBP21.37■■□□□ 1.01
LSM14A-208ENST00000590416 KIAA1551Q9HCM1 1747 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 PXDNLA1KZ92 1463 aa21.37■■□□□ 1.01
LSM14A-208ENST00000590416 ABCC12Q96J65 1359 aa21.36■■□□□ 1.01
LSM14A-208ENST00000590416 SH3TC1Q8TE82 1336 aa21.36■■□□□ 1.01
LSM14A-208ENST00000590416 CHRNA5P30532 468 aa21.36■■□□□ 1.01
LSM14A-208ENST00000590416 FRAT1Q92837 279 aaPredicted RBP21.36■■□□□ 1.01
LSM14A-208ENST00000590416 RNF123Q5XPI4 1314 aa21.35■■□□□ 1.01
LSM14A-208ENST00000590416 NEURL1BA8MQ27 555 aa21.35■■□□□ 1.01
LSM14A-208ENST00000590416 H0YIN7 160 aa21.35■■□□□ 1.01
LSM14A-208ENST00000590416 IGKV5-2P06315 115 aa21.35■■□□□ 1.01
LSM14A-208ENST00000590416 TRIM28Q13263 835 aaKnown RBP21.35■■□□□ 1.01
LSM14A-208ENST00000590416 FAM89AQ96GI7 184 aa21.35■■□□□ 1.01
LSM14A-208ENST00000590416 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
LSM14A-208ENST00000590416 DCAF8L1A6NGE4 600 aa21.34■■□□□ 1.01
LSM14A-208ENST00000590416 ZNF622Q969S3 477 aaKnown RBP eCLIP21.34■■□□□ 1.013e-9■■□□□ 12.6
LSM14A-208ENST00000590416 COL11A2P13942 1736 aaPredicted RBP21.34■■□□□ 1.01
LSM14A-208ENST00000590416 CACNA1SQ13698 1873 aa21.34■■□□□ 1.01
LSM14A-208ENST00000590416 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1.01
LSM14A-208ENST00000590416 SYNE4Q8N205 404 aa21.33■■□□□ 1.01
LSM14A-208ENST00000590416 LINS1Q8NG48 757 aa21.33■■□□□ 1.01
LSM14A-208ENST00000590416 API5Q9BZZ5 524 aaKnown RBP21.33■■□□□ 1.01
LSM14A-208ENST00000590416 PDZRN3Q9UPQ7 1066 aa21.33■■□□□ 1.01
LSM14A-208ENST00000590416 DLEC1Q9Y238 1755 aa21.33■■□□□ 1
LSM14A-208ENST00000590416 IPO8O15397 1037 aaKnown RBP21.32■■□□□ 1
LSM14A-208ENST00000590416 HCLS1P14317 486 aaPredicted RBP21.32■■□□□ 1
LSM14A-208ENST00000590416 BEND3Q5T5X7 828 aa21.32■■□□□ 1
LSM14A-208ENST00000590416 ZBTB38Q8NAP3 1195 aaPredicted RBP21.32■■□□□ 1
LSM14A-208ENST00000590416 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
LSM14A-208ENST00000590416 NLRP3Q96P20 1036 aa21.32■■□□□ 1
LSM14A-208ENST00000590416 SRCIN1Q9C0H9 1055 aa21.32■■□□□ 1
LSM14A-208ENST00000590416 BRCA1P38398 1863 aaKnown RBP21.31■■□□□ 1
LSM14A-208ENST00000590416 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
LSM14A-208ENST00000590416 GPR162Q16538 588 aa21.31■■□□□ 1
LSM14A-208ENST00000590416 PIM2Q9P1W9 311 aa21.31■■□□□ 1
LSM14A-208ENST00000590416 DDX60Q8IY21 1712 aaKnown RBP21.31■■□□□ 1
LSM14A-208ENST00000590416 LAMB2P55268 1798 aa21.31■■□□□ 1
LSM14A-208ENST00000590416 IRS4O14654 1257 aaPredicted RBP21.3■■□□□ 1
LSM14A-208ENST00000590416 GCKRQ14397 625 aa21.3■■□□□ 1
LSM14A-208ENST00000590416 RPGRQ92834 1020 aaKnown RBP21.3■■□□□ 1
LSM14A-208ENST00000590416 RCAN3Q9UKA8 241 aa21.3■■□□□ 1
LSM14A-208ENST00000590416 BCS1LQ9Y276 419 aa21.3■■□□□ 1
LSM14A-208ENST00000590416 HSP90B1P14625 803 aaKnown RBP21.29■■□□□ 1
LSM14A-208ENST00000590416 UBE3BQ7Z3V4 1068 aa21.29■■□□□ 1
LSM14A-208ENST00000590416 MASTLQ96GX5 879 aa21.29■■□□□ 1
LSM14A-208ENST00000590416 RIC1Q4ADV7 1423 aa21.29■■□□□ 1
LSM14A-208ENST00000590416 ALDH1L1O75891 902 aa21.28■■□□□ 1
LSM14A-208ENST00000590416 KCNA3P22001 575 aa21.28■■□□□ 1
LSM14A-208ENST00000590416 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
LSM14A-208ENST00000590416 ZKSCAN2Q63HK3 967 aa21.28■■□□□ 1
LSM14A-208ENST00000590416 C9orf78Q9NZ63 289 aaPredicted RBP21.28■■□□□ 1
LSM14A-208ENST00000590416 SRGNP10124 158 aa21.27■■□□□ 1
LSM14A-208ENST00000590416 NPR1P16066 1061 aa21.27■■□□□ 1
LSM14A-208ENST00000590416 DALRD3Q5D0E6 543 aaKnown RBP21.27■■□□□ 1
LSM14A-208ENST00000590416 ATF7IPQ6VMQ6 1270 aa21.27■■□□□ 1
LSM14A-208ENST00000590416 ARHGAP45Q92619 1136 aa21.27■■□□□ 1
LSM14A-208ENST00000590416 MYH3P11055 1940 aa21.27■■□□□ 1
LSM14A-208ENST00000590416 STYK1Q6J9G0 422 aa21.26■□□□□ 0.99
LSM14A-208ENST00000590416 C3orf67Q6ZVT6 689 aa21.26■□□□□ 0.99
LSM14A-208ENST00000590416 TTLL6Q8N841 843 aa21.26■□□□□ 0.99
LSM14A-208ENST00000590416 CNKSR1Q969H4 720 aa21.26■□□□□ 0.99
LSM14A-208ENST00000590416 CLUAP1Q96AJ1 413 aa21.26■□□□□ 0.99
LSM14A-208ENST00000590416 CDHR2Q9BYE9 1310 aa21.26■□□□□ 0.99
LSM14A-208ENST00000590416 PDE8AO60658 829 aa21.25■□□□□ 0.99
LSM14A-208ENST00000590416 TRIM27P14373 513 aa21.25■□□□□ 0.99
LSM14A-208ENST00000590416 CCT4P50991 539 aaKnown RBP21.25■□□□□ 0.99
LSM14A-208ENST00000590416 RBM17Q96I25 401 aaKnown RBP21.25■□□□□ 0.99
LSM14A-208ENST00000590416 KLRG2A4D1S0 409 aaPredicted RBP21.24■□□□□ 0.99
LSM14A-208ENST00000590416 H7C1W4 665 aa21.24■□□□□ 0.99
LSM14A-208ENST00000590416 GRM8O00222 908 aa21.24■□□□□ 0.99
LSM14A-208ENST00000590416 FTSJ3Q8IY81 847 aaKnown RBP21.24■□□□□ 0.99
LSM14A-208ENST00000590416 ZNF219Q9P2Y4 722 aaPredicted RBP21.24■□□□□ 0.99
LSM14A-208ENST00000590416 TNNQ9UQP3 1299 aa21.24■□□□□ 0.99
LSM14A-208ENST00000590416 ARFGEF1Q9Y6D6 1849 aa21.23■□□□□ 0.99
LSM14A-208ENST00000590416 YBX3P16989 372 aaKnown RBP eCLIP21.23■□□□□ 0.99
LSM14A-208ENST00000590416 ALDH1B1P30837 517 aa21.23■□□□□ 0.99
LSM14A-208ENST00000590416 CRY2Q49AN0 593 aa21.23■□□□□ 0.99
LSM14A-208ENST00000590416 CCDC85AQ96PX6 553 aaPredicted RBP21.23■□□□□ 0.99
LSM14A-208ENST00000590416 DDX46Q7L014 1031 aaKnown RBP21.22■□□□□ 0.99
LSM14A-208ENST00000590416 ABCC4O15439 1325 aa21.22■□□□□ 0.99
LSM14A-208ENST00000590416 SLX4Q8IY92 1834 aa21.22■□□□□ 0.99
LSM14A-208ENST00000590416 PRPF40BQ6NWY9 871 aaKnown RBP21.21■□□□□ 0.99
LSM14A-208ENST00000590416 TAF1P21675 1872 aa21.2■□□□□ 0.98
LSM14A-208ENST00000590416 CTSWP56202 376 aa21.2■□□□□ 0.98
LSM14A-208ENST00000590416 CCDC152Q4G0S7 254 aa21.2■□□□□ 0.98
LSM14A-208ENST00000590416 DZIP1LQ8IYY4 767 aaKnown RBP21.2■□□□□ 0.98
LSM14A-208ENST00000590416 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms