RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 MCOLN1Q9GZU1 580 aa10.86□□□□□ -0.67
TPM4-211ENST00000589897 PRKRIP1Q9H875 184 aaPredicted RBP10.86□□□□□ -0.67
TPM4-211ENST00000589897 SBF1O95248 1867 aa10.85□□□□□ -0.67
TPM4-211ENST00000589897 DDX21Q9NR30 783 aaKnown RBP eCLIP10.85□□□□□ -0.67
TPM4-211ENST00000589897 BABAM1Q9NWV8 329 aa10.85□□□□□ -0.67
TPM4-211ENST00000589897 ADAMTS8Q9UP79 889 aa10.85□□□□□ -0.67
TPM4-211ENST00000589897 DLEC1Q9Y238 1755 aa10.85□□□□□ -0.67
TPM4-211ENST00000589897 RGL2O15211 777 aa10.84□□□□□ -0.67
TPM4-211ENST00000589897 DGKZQ13574 1117 aa10.84□□□□□ -0.67
TPM4-211ENST00000589897 PRPF38BQ5VTL8 546 aaKnown RBP10.84□□□□□ -0.67
TPM4-211ENST00000589897 MAP1SQ66K74 1059 aaPredicted RBP10.84□□□□□ -0.67
TPM4-211ENST00000589897 STYK1Q6J9G0 422 aa10.84□□□□□ -0.67
TPM4-211ENST00000589897 MASTLQ96GX5 879 aa10.84□□□□□ -0.67
TPM4-211ENST00000589897 ANKRD31Q8N7Z5 1873 aa10.83□□□□□ -0.68
TPM4-211ENST00000589897 ERVV-1B6SEH8 477 aa10.83□□□□□ -0.68
TPM4-211ENST00000589897 GRM1Q13255 1194 aa10.83□□□□□ -0.68
TPM4-211ENST00000589897 HLFQ16534 295 aa10.83□□□□□ -0.68
TPM4-211ENST00000589897 NYXQ9GZU5 481 aa10.83□□□□□ -0.68
TPM4-211ENST00000589897 ZBTB3Q9H5J0 574 aa10.83□□□□□ -0.68
TPM4-211ENST00000589897 ERBB4Q15303 1308 aa10.83□□□□□ -0.68
TPM4-211ENST00000589897 MAP3K15Q6ZN16 1313 aa10.83□□□□□ -0.68
TPM4-211ENST00000589897 SRGNP10124 158 aa10.82□□□□□ -0.68
TPM4-211ENST00000589897 NECTIN2Q92692 538 aa10.82□□□□□ -0.68
TPM4-211ENST00000589897 CACNA1SQ13698 1873 aa10.82□□□□□ -0.68
TPM4-211ENST00000589897 NUP98P52948 1817 aa10.81□□□□□ -0.68
TPM4-211ENST00000589897 CCDC88AQ3V6T2 1871 aa10.81□□□□□ -0.68
TPM4-211ENST00000589897 NPR1P16066 1061 aa10.81□□□□□ -0.68
TPM4-211ENST00000589897 GPTP24298 496 aa10.81□□□□□ -0.68
TPM4-211ENST00000589897 CALD1Q05682 793 aaKnown RBP10.81□□□□□ -0.68
TPM4-211ENST00000589897 CYP4F22Q6NT55 531 aa10.81□□□□□ -0.68
TPM4-211ENST00000589897 PRPF40BQ6NWY9 871 aaKnown RBP10.81□□□□□ -0.68
TPM4-211ENST00000589897 TTLL7Q6ZT98 887 aa10.81□□□□□ -0.68
TPM4-211ENST00000589897 RTKN2Q8IZC4 609 aa10.81□□□□□ -0.68
TPM4-211ENST00000589897 GCC1Q96CN9 775 aa10.81□□□□□ -0.68
TPM4-211ENST00000589897 CHL1O00533 1208 aa10.8□□□□□ -0.68
TPM4-211ENST00000589897 LMOD1P29536 600 aaPredicted RBP10.8□□□□□ -0.68
TPM4-211ENST00000589897 ALDH1B1P30837 517 aa10.8□□□□□ -0.68
TPM4-211ENST00000589897 AIMP1Q12904 312 aaKnown RBP10.8□□□□□ -0.68
TPM4-211ENST00000589897 CCDC93Q567U6 631 aa10.8□□□□□ -0.68
TPM4-211ENST00000589897 PPP1R42Q7Z4L9 355 aa10.8□□□□□ -0.68
TPM4-211ENST00000589897 GPC2Q8N158 579 aa10.8□□□□□ -0.68
TPM4-211ENST00000589897 TSKSQ9UJT2 592 aa10.8□□□□□ -0.68
TPM4-211ENST00000589897 TRIM35Q9UPQ4 493 aa10.8□□□□□ -0.68
TPM4-211ENST00000589897 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
TPM4-211ENST00000589897 COL11A2P13942 1736 aaPredicted RBP10.8□□□□□ -0.68
TPM4-211ENST00000589897 ZNF316A6NFI3 1004 aaPredicted RBP10.79□□□□□ -0.68
TPM4-211ENST00000589897 APAF1O14727 1248 aa10.79□□□□□ -0.68
TPM4-211ENST00000589897 ANP32CO43423 234 aa10.79□□□□□ -0.68
TPM4-211ENST00000589897 BRPF1P55201 1214 aaPredicted RBP10.79□□□□□ -0.68
TPM4-211ENST00000589897 FKBP4Q02790 459 aaKnown RBP eCLIP10.79□□□□□ -0.68
TPM4-211ENST00000589897 GIGYF2Q6Y7W6 1299 aaKnown RBP10.79□□□□□ -0.68
TPM4-211ENST00000589897 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
TPM4-211ENST00000589897 JDP2Q8WYK2 163 aa10.79□□□□□ -0.68
TPM4-211ENST00000589897 RPGRQ92834 1020 aaKnown RBP10.79□□□□□ -0.68
TPM4-211ENST00000589897 HHIPL1Q96JK4 782 aa10.79□□□□□ -0.68
TPM4-211ENST00000589897 FZD9O00144 591 aa10.78□□□□□ -0.68
TPM4-211ENST00000589897 ANXA1P04083 346 aa10.78□□□□□ -0.68
TPM4-211ENST00000589897 PARP10Q53GL7 1025 aa10.78□□□□□ -0.68
TPM4-211ENST00000589897 HSP90AB3PQ58FF7 597 aa10.78□□□□□ -0.68
TPM4-211ENST00000589897 HDGFL1Q5TGJ6 251 aa10.78□□□□□ -0.68
TPM4-211ENST00000589897 CST9Q5W186 159 aa10.78□□□□□ -0.68
TPM4-211ENST00000589897 COPS6Q7L5N1 327 aa10.78□□□□□ -0.68
TPM4-211ENST00000589897 TMX4Q9H1E5 349 aaPredicted RBP10.78□□□□□ -0.68
TPM4-211ENST00000589897 SLX4Q8IY92 1834 aa10.78□□□□□ -0.68
TPM4-211ENST00000589897 EIF6P56537 245 aaKnown RBP10.77□□□□□ -0.69
TPM4-211ENST00000589897 GNAI1P63096 354 aa10.77□□□□□ -0.69
TPM4-211ENST00000589897 PDIA6Q15084 440 aa10.77□□□□□ -0.69
TPM4-211ENST00000589897 SUSD4Q5VX71 490 aa10.77□□□□□ -0.69
TPM4-211ENST00000589897 USP50Q70EL3 339 aaPredicted RBP10.77□□□□□ -0.69
TPM4-211ENST00000589897 XAGE3Q8WTP9 111 aa10.77□□□□□ -0.69
TPM4-211ENST00000589897 C7orf43Q8WVR3 580 aa10.77□□□□□ -0.69
TPM4-211ENST00000589897 UTP14AQ9BVJ6 771 aaKnown RBP10.77□□□□□ -0.69
TPM4-211ENST00000589897 ZNF277Q9NRM2 450 aaPredicted RBP10.77□□□□□ -0.69
TPM4-211ENST00000589897 RNF123Q5XPI4 1314 aa10.77□□□□□ -0.69
TPM4-211ENST00000589897 TIAM2Q8IVF5 1701 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 ARFGEF2Q9Y6D5 1785 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 KLRG2A4D1S0 409 aaPredicted RBP10.76□□□□□ -0.69
TPM4-211ENST00000589897 AOC2O75106 756 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 HOXB7P09629 217 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 KRT24Q2M2I5 525 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 PROSER3Q2NL68 480 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 DUSP27Q5VZP5 1158 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 SAPCD2Q86UD0 394 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 ZNF34Q8IZ26 560 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 RBM17Q96I25 401 aaKnown RBP10.76□□□□□ -0.69
TPM4-211ENST00000589897 NLRP3Q96P20 1036 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 CHMP4AQ9BY43 222 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 CHPF2Q9P2E5 772 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 DBF4Q9UBU7 674 aaPredicted RBP10.76□□□□□ -0.69
TPM4-211ENST00000589897 UBN2Q6ZU65 1347 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 ZNF541Q9H0D2 1346 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 FER1L6Q2WGJ9 1857 aa10.76□□□□□ -0.69
TPM4-211ENST00000589897 IARSP41252 1262 aaKnown RBP10.75□□□□□ -0.69
TPM4-211ENST00000589897 NOGQ13253 232 aa10.75□□□□□ -0.69
TPM4-211ENST00000589897 MRS2Q9HD23 443 aa10.75□□□□□ -0.69
TPM4-211ENST00000589897 MBIPQ9NS73 344 aa10.75□□□□□ -0.69
TPM4-211ENST00000589897 IFT57Q9NWB7 429 aa10.75□□□□□ -0.69
TPM4-211ENST00000589897 HYPKQ9NX55 129 aa10.75□□□□□ -0.69
TPM4-211ENST00000589897 DICER1Q9UPY3 1922 aaKnown RBP10.75□□□□□ -0.69
TPM4-211ENST00000589897 IBTKQ9P2D0 1353 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms