RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
RETREG3-208ENST00000589797 NOL10Q9BSC4 688 aaKnown RBP17.24■□□□□ 0.35
RETREG3-208ENST00000589797 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
RETREG3-208ENST00000589797 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
RETREG3-208ENST00000589797 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
RETREG3-208ENST00000589797 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
RETREG3-208ENST00000589797 ATP6V1AP38606 617 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 SAFBQ15424 915 aaKnown RBP eCLIP17.23■□□□□ 0.35
RETREG3-208ENST00000589797 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 KIAA0232Q92628 1395 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 BEND3Q5T5X7 828 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 EAF2Q96CJ1 260 aaPredicted RBP17.23■□□□□ 0.35
RETREG3-208ENST00000589797 C8orf37Q96NL8 207 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 GCKRQ14397 625 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 AKAP2Q9Y2D5 859 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 ESPNB1AK53 854 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 KRT32Q14532 448 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
RETREG3-208ENST00000589797 TPM4P67936 248 aa17.22■□□□□ 0.35
RETREG3-208ENST00000589797 JAG2Q9Y219 1238 aa17.22■□□□□ 0.35
RETREG3-208ENST00000589797 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
RETREG3-208ENST00000589797 HCLS1P14317 486 aaPredicted RBP17.22■□□□□ 0.35
RETREG3-208ENST00000589797 PHKG2P15735 406 aa17.22■□□□□ 0.35
RETREG3-208ENST00000589797 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
RETREG3-208ENST00000589797 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
RETREG3-208ENST00000589797 RAB3GAP1Q15042 981 aa17.22■□□□□ 0.35
RETREG3-208ENST00000589797 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
RETREG3-208ENST00000589797 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
RETREG3-208ENST00000589797 DNM1Q05193 864 aaKnown RBP17.21■□□□□ 0.35
RETREG3-208ENST00000589797 ZNF213O14771 459 aa17.21■□□□□ 0.35
RETREG3-208ENST00000589797 DDB1Q16531 1140 aa17.21■□□□□ 0.35
RETREG3-208ENST00000589797 GIMAP6Q6P9H5 292 aa17.21■□□□□ 0.35
RETREG3-208ENST00000589797 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
RETREG3-208ENST00000589797 INO80Q9ULG1 1556 aaPredicted RBP17.2■□□□□ 0.34
RETREG3-208ENST00000589797 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
RETREG3-208ENST00000589797 CREB3L3Q68CJ9 461 aa17.2■□□□□ 0.34
RETREG3-208ENST00000589797 SSH3Q8TE77 659 aa17.2■□□□□ 0.34
RETREG3-208ENST00000589797 SEC62Q99442 399 aaKnown RBP17.2■□□□□ 0.34
RETREG3-208ENST00000589797 NAPBQ9H115 298 aa17.2■□□□□ 0.34
RETREG3-208ENST00000589797 USP25Q9UHP3 1055 aa17.2■□□□□ 0.34
RETREG3-208ENST00000589797 CTNNA3Q9UI47 895 aa17.2■□□□□ 0.34
RETREG3-208ENST00000589797 ATP2B3Q16720 1220 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 MICU3Q86XE3 530 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 ATP2B2Q01814 1243 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
RETREG3-208ENST00000589797 KCNQ4P56696 695 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 NACAP1Q9BZK3 213 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 TLR7Q9NYK1 1049 aaKnown RBP17.19■□□□□ 0.34
RETREG3-208ENST00000589797 RXRAP19793 462 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 SLC9C2Q5TAH2 1124 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 PTPRMP28827 1452 aa17.19■□□□□ 0.34
RETREG3-208ENST00000589797 DIP2CQ9Y2E4 1556 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 ZSCAN23Q3MJ62 389 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 PNPLA6Q8IY17 1366 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
RETREG3-208ENST00000589797 Q6ZUG5 572 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 NUP62CLQ9H1M0 184 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
RETREG3-208ENST00000589797 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 SGSM2O43147 1006 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 PTH1RQ03431 593 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
RETREG3-208ENST00000589797 CCDC173Q0VFZ6 552 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 ISM2Q6H9L7 571 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
RETREG3-208ENST00000589797 A0A1B0GUL7 405 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 UBAP1LF5GYI3 381 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 IRS4O14654 1257 aaPredicted RBP17.17■□□□□ 0.34
RETREG3-208ENST00000589797 ZPR1O75312 459 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 CCDC192P0DO97 292 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 CCDC34Q96HJ3 373 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
RETREG3-208ENST00000589797 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 SNX14Q9Y5W7 946 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 MCMDC2Q4G0Z9 681 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 ARHGEF40Q8TER5 1519 aa17.17■□□□□ 0.34
RETREG3-208ENST00000589797 CLSTN1O94985 981 aa17.16■□□□□ 0.34
RETREG3-208ENST00000589797 IL15P40933 162 aaPredicted RBP17.16■□□□□ 0.34
RETREG3-208ENST00000589797 FILIP1Q7Z7B0 1213 aa17.16■□□□□ 0.34
RETREG3-208ENST00000589797 UBAC1Q9BSL1 405 aa17.16■□□□□ 0.34
RETREG3-208ENST00000589797 ERBB3P21860 1342 aa17.16■□□□□ 0.34
RETREG3-208ENST00000589797 RANBP6O60518 1105 aaKnown RBP17.16■□□□□ 0.34
RETREG3-208ENST00000589797 TNNI3KQ59H18 835 aa17.16■□□□□ 0.34
RETREG3-208ENST00000589797 FPGT-TNNI3KV9GXZ4 949 aa17.16■□□□□ 0.34
RETREG3-208ENST00000589797 SYT1P21579 422 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 CCAR2Q8N163 923 aaKnown RBP17.15■□□□□ 0.34
RETREG3-208ENST00000589797 PLBD2Q8NHP8 589 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 ZSCAN22P10073 491 aaPredicted RBP17.15■□□□□ 0.34
RETREG3-208ENST00000589797 RBM10P98175 930 aaKnown RBP17.15■□□□□ 0.34
RETREG3-208ENST00000589797 APOBRQ0VD83 1088 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 ZSCAN25Q6NSZ9 544 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 ANKIB1Q9P2G1 1089 aa17.15■□□□□ 0.34
RETREG3-208ENST00000589797 TTC41PQ6P2S7 1318 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms