RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 ARHGEF25Q86VW2 580 aa7.9□□□□□ -1.14
LINC01539-202ENST00000589293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.9□□□□□ -1.14
LINC01539-202ENST00000589293 MARCH10Q8NA82 808 aaPredicted RBP7.9□□□□□ -1.14
LINC01539-202ENST00000589293 TSC1Q92574 1164 aa7.9□□□□□ -1.14
LINC01539-202ENST00000589293 L3MBTL2Q969R5 705 aa7.9□□□□□ -1.14
LINC01539-202ENST00000589293 SLIT3O75094 1523 aa7.89□□□□□ -1.15
LINC01539-202ENST00000589293 F12P00748 615 aaPredicted RBP7.89□□□□□ -1.15
LINC01539-202ENST00000589293 SLC15A2Q16348 729 aa7.89□□□□□ -1.15
LINC01539-202ENST00000589293 POM121Q96HA1 1249 aa7.89□□□□□ -1.15
LINC01539-202ENST00000589293 MTFR1LQ9H019 292 aa7.89□□□□□ -1.15
LINC01539-202ENST00000589293 LRRC37A3O60309 1634 aa7.89□□□□□ -1.15
LINC01539-202ENST00000589293 TRPM1Q7Z4N2 1603 aa7.89□□□□□ -1.15
LINC01539-202ENST00000589293 PPEF1O14829 653 aaPredicted RBP7.88□□□□□ -1.15
LINC01539-202ENST00000589293 IL2RBP14784 551 aa7.88□□□□□ -1.15
LINC01539-202ENST00000589293 HELBQ8NG08 1087 aaPredicted RBP7.88□□□□□ -1.15
LINC01539-202ENST00000589293 ACSBG1Q96GR2 724 aa7.88□□□□□ -1.15
LINC01539-202ENST00000589293 SLC6A16Q9GZN6 736 aa7.88□□□□□ -1.15
LINC01539-202ENST00000589293 TERF2IPQ9NYB0 399 aa7.88□□□□□ -1.15
LINC01539-202ENST00000589293 RGPD3A6NKT7 1758 aaPredicted RBP7.88□□□□□ -1.15
LINC01539-202ENST00000589293 RGPD4Q7Z3J3 1758 aa7.88□□□□□ -1.15
LINC01539-202ENST00000589293 BCL9O00512 1426 aa7.87□□□□□ -1.15
LINC01539-202ENST00000589293 AKAP12Q02952 1782 aa7.87□□□□□ -1.15
LINC01539-202ENST00000589293 POLD1P28340 1107 aa7.87□□□□□ -1.15
LINC01539-202ENST00000589293 CARD11Q9BXL7 1154 aa7.87□□□□□ -1.15
LINC01539-202ENST00000589293 MAP10Q9P2G4 905 aa7.87□□□□□ -1.15
LINC01539-202ENST00000589293 TNS2Q63HR2 1409 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 PIK3C2AO00443 1686 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 FLIIQ13045 1269 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 GPR162Q16538 588 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 PTPRNQ16849 979 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 PLA2G2CQ5R387 149 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 PTCRAQ6ISU1 281 aaPredicted RBP7.86□□□□□ -1.15
LINC01539-202ENST00000589293 ANKRD24Q8TF21 1146 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 SYTL4Q96C24 671 aaPredicted RBP7.86□□□□□ -1.15
LINC01539-202ENST00000589293 ARXQ96QS3 562 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 FHDC1Q9C0D6 1143 aaPredicted RBP7.86□□□□□ -1.15
LINC01539-202ENST00000589293 PEAK1Q9H792 1746 aa7.86□□□□□ -1.15
LINC01539-202ENST00000589293 ABCC6O95255 1503 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 HMGB2P26583 209 aaKnown RBP7.85□□□□□ -1.15
LINC01539-202ENST00000589293 NR6A1Q15406 480 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 IFFO2Q5TF58 517 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 PPP1R18Q6NYC8 613 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 PTF1AQ7RTS3 328 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 DDX54Q8TDD1 881 aaKnown RBP7.85□□□□□ -1.15
LINC01539-202ENST00000589293 EMID1Q96A84 441 aaPredicted RBP7.85□□□□□ -1.15
LINC01539-202ENST00000589293 CLUAP1Q96AJ1 413 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 SIN3AQ96ST3 1273 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 SYT17Q9BSW7 474 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 SBF2Q86WG5 1849 aa7.85□□□□□ -1.15
LINC01539-202ENST00000589293 NME9Q86XW9 330 aa7.84□□□□□ -1.15
LINC01539-202ENST00000589293 LTV1Q96GA3 475 aaPredicted RBP7.84□□□□□ -1.15
LINC01539-202ENST00000589293 COG3Q96JB2 828 aa7.84□□□□□ -1.15
LINC01539-202ENST00000589293 NUDT12Q9BQG2 462 aa7.84□□□□□ -1.15
LINC01539-202ENST00000589293 PDGFDQ9GZP0 370 aaPredicted RBP7.84□□□□□ -1.15
LINC01539-202ENST00000589293 TFCP2L1Q9NZI6 479 aa7.84□□□□□ -1.15
LINC01539-202ENST00000589293 COG6Q9Y2V7 657 aa7.84□□□□□ -1.15
LINC01539-202ENST00000589293 FCF1Q9Y324 198 aaKnown RBP7.84□□□□□ -1.15
LINC01539-202ENST00000589293 TONSLQ96HA7 1378 aa7.84□□□□□ -1.16
LINC01539-202ENST00000589293 WNK3Q9BYP7 1800 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 AMPHP49418 695 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 SLC27A3Q5K4L6 730 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 ZNF784Q8NCA9 323 aaPredicted RBP7.83□□□□□ -1.16
LINC01539-202ENST00000589293 SLC16A10Q8TF71 515 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 EVA1BQ9NVM1 165 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 TBC1D2BQ9UPU7 963 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 COL18A1P39060 1754 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 USP31Q70CQ4 1352 aa7.83□□□□□ -1.16
LINC01539-202ENST00000589293 CASZ1Q86V15 1759 aa7.82□□□□□ -1.16
LINC01539-202ENST00000589293 KAT6BQ8WYB5 2073 aa7.82□□□□□ -1.16
LINC01539-202ENST00000589293 SENP3-EIF4A1A0A087X0R7 540 aa7.82□□□□□ -1.16
LINC01539-202ENST00000589293 EDC4Q6P2E9 1401 aaKnown RBP7.82□□□□□ -1.16
LINC01539-202ENST00000589293 PLA2G2EQ9NZK7 142 aa7.82□□□□□ -1.16
LINC01539-202ENST00000589293 MYOM1P52179 1685 aa7.82□□□□□ -1.16
LINC01539-202ENST00000589293 NFAT5O94916 1531 aa7.82□□□□□ -1.16
LINC01539-202ENST00000589293 SBNO2Q9Y2G9 1366 aa7.82□□□□□ -1.16
LINC01539-202ENST00000589293 RGPD5Q99666 1765 aa7.82□□□□□ -1.16
LINC01539-202ENST00000589293 KCNH2Q12809 1159 aa7.81□□□□□ -1.16
LINC01539-202ENST00000589293 IRF5Q13568 498 aa7.81□□□□□ -1.16
LINC01539-202ENST00000589293 IP6K1Q92551 441 aa7.81□□□□□ -1.16
LINC01539-202ENST00000589293 SLC12A5Q9H2X9 1139 aa7.81□□□□□ -1.16
LINC01539-202ENST00000589293 GDPD2Q9HCC8 539 aa7.81□□□□□ -1.16
LINC01539-202ENST00000589293 NHSQ6T4R5 1651 aa7.81□□□□□ -1.16
LINC01539-202ENST00000589293 SMG6Q86US8 1419 aaKnown RBP7.8□□□□□ -1.16
LINC01539-202ENST00000589293 GIGYF1O75420 1035 aaPredicted RBP7.8□□□□□ -1.16
LINC01539-202ENST00000589293 ZCRB1Q8TBF4 217 aaKnown RBP7.8□□□□□ -1.16
LINC01539-202ENST00000589293 RAPGEF4Q8WZA2 1011 aa7.8□□□□□ -1.16
LINC01539-202ENST00000589293 PUS7Q96PZ0 661 aaKnown RBP7.8□□□□□ -1.16
LINC01539-202ENST00000589293 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.8□□□□□ -1.16
LINC01539-202ENST00000589293 MON2Q7Z3U7 1717 aa7.8□□□□□ -1.16
LINC01539-202ENST00000589293 GRIN3BO60391 1043 aa7.79□□□□□ -1.16
LINC01539-202ENST00000589293 ZNF827Q17R98 1081 aa7.79□□□□□ -1.16
LINC01539-202ENST00000589293 ANKLE1Q8NAG6 615 aa7.79□□□□□ -1.16
LINC01539-202ENST00000589293 CCNL1Q9UK58 526 aaPredicted RBP7.79□□□□□ -1.16
LINC01539-202ENST00000589293 A0A1W2PP64 1363 aa7.79□□□□□ -1.16
LINC01539-202ENST00000589293 USP47Q96K76 1375 aa7.79□□□□□ -1.16
LINC01539-202ENST00000589293 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
LINC01539-202ENST00000589293 LTN1O94822 1766 aa7.79□□□□□ -1.16
LINC01539-202ENST00000589293 TATP17735 454 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms