RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 KDM2BQ8NHM5 1336 aa23.41■■□□□ 1.34
HDAC5-209ENST00000588703 OLFM4Q6UX06 510 aa23.41■■□□□ 1.34
HDAC5-209ENST00000588703 C3orf67Q6ZVT6 689 aa23.41■■□□□ 1.34
HDAC5-209ENST00000588703 TCIRG1Q13488 830 aa23.4■■□□□ 1.34
HDAC5-209ENST00000588703 CCDC27Q2M243 656 aa23.4■■□□□ 1.34
HDAC5-209ENST00000588703 CCDC93Q567U6 631 aa23.4■■□□□ 1.34
HDAC5-209ENST00000588703 HSP90AB3PQ58FF7 597 aa23.4■■□□□ 1.34
HDAC5-209ENST00000588703 NLRP10Q86W26 655 aa23.4■■□□□ 1.34
HDAC5-209ENST00000588703 C8orf58Q8NAV2 365 aa23.4■■□□□ 1.34
HDAC5-209ENST00000588703 UTP14AQ9BVJ6 771 aaKnown RBP23.4■■□□□ 1.34
HDAC5-209ENST00000588703 SNED1Q8TER0 1413 aa23.4■■□□□ 1.34
HDAC5-209ENST00000588703 ELL2O00472 640 aaPredicted RBP23.39■■□□□ 1.33
HDAC5-209ENST00000588703 WWC1Q8IX03 1113 aa23.39■■□□□ 1.33
HDAC5-209ENST00000588703 PLBD2Q8NHP8 589 aa23.39■■□□□ 1.33
HDAC5-209ENST00000588703 DDX60Q8IY21 1712 aaKnown RBP23.39■■□□□ 1.33
HDAC5-209ENST00000588703 ALDH1B1P30837 517 aa23.38■■□□□ 1.33
HDAC5-209ENST00000588703 HOXA10P31260 410 aaPredicted RBP23.38■■□□□ 1.33
HDAC5-209ENST00000588703 HYPKQ9NX55 129 aa23.38■■□□□ 1.33
HDAC5-209ENST00000588703 RNF123Q5XPI4 1314 aa23.37■■□□□ 1.33
HDAC5-209ENST00000588703 GLTPD2A6NH11 291 aa23.37■■□□□ 1.33
HDAC5-209ENST00000588703 SLC10A5Q5PT55 438 aa23.37■■□□□ 1.33
HDAC5-209ENST00000588703 ANKRD13DQ6ZTN6 518 aa23.37■■□□□ 1.33
HDAC5-209ENST00000588703 TSR2Q969E8 191 aaKnown RBP23.37■■□□□ 1.33
HDAC5-209ENST00000588703 WDR90Q96KV7 1748 aa23.36■■□□□ 1.33
HDAC5-209ENST00000588703 TOMM70O94826 608 aa23.36■■□□□ 1.33
HDAC5-209ENST00000588703 SYNE4Q8N205 404 aa23.36■■□□□ 1.33
HDAC5-209ENST00000588703 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
HDAC5-209ENST00000588703 RPGRQ92834 1020 aaKnown RBP23.36■■□□□ 1.33
HDAC5-209ENST00000588703 RRAGCQ9HB90 399 aa23.36■■□□□ 1.33
HDAC5-209ENST00000588703 TAF1P21675 1872 aa23.35■■□□□ 1.33
HDAC5-209ENST00000588703 FKBP4Q02790 459 aaKnown RBP eCLIP23.35■■□□□ 1.33
HDAC5-209ENST00000588703 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
HDAC5-209ENST00000588703 SLC51AQ86UW1 340 aa23.35■■□□□ 1.33
HDAC5-209ENST00000588703 ZNF428Q96B54 188 aa23.34■■□□□ 1.33
HDAC5-209ENST00000588703 CRAMP1Q96RY5 1269 aa23.34■■□□□ 1.33
HDAC5-209ENST00000588703 ISCA1Q9BUE6 129 aa23.34■■□□□ 1.33
HDAC5-209ENST00000588703 PHAXQ9H814 394 aaKnown RBP23.34■■□□□ 1.33
HDAC5-209ENST00000588703 HCLS1P14317 486 aaPredicted RBP23.33■■□□□ 1.33
HDAC5-209ENST00000588703 HSPA6P17066 643 aa23.33■■□□□ 1.33
HDAC5-209ENST00000588703 RTKN2Q8IZC4 609 aa23.33■■□□□ 1.33
HDAC5-209ENST00000588703 RBM17Q96I25 401 aaKnown RBP23.33■■□□□ 1.33
HDAC5-209ENST00000588703 NLRP3Q96P20 1036 aa23.33■■□□□ 1.33
HDAC5-209ENST00000588703 TRMT112Q9UI30 125 aaKnown RBP23.33■■□□□ 1.33
HDAC5-209ENST00000588703 IL16Q14005 1332 aa23.33■■□□□ 1.32
HDAC5-209ENST00000588703 ATP5J2-PTCD1G3V325 749 aa23.32■■□□□ 1.32
HDAC5-209ENST00000588703 RBM46Q8TBY0 533 aaKnown RBP23.32■■□□□ 1.32
HDAC5-209ENST00000588703 ZNF277Q9NRM2 450 aaPredicted RBP23.32■■□□□ 1.32
HDAC5-209ENST00000588703 SH3TC1Q8TE82 1336 aa23.32■■□□□ 1.32
HDAC5-209ENST00000588703 POTECB2RU33 542 aa23.3■■□□□ 1.32
HDAC5-209ENST00000588703 C16orf71Q8IYS4 520 aaPredicted RBP23.3■■□□□ 1.32
HDAC5-209ENST00000588703 ABCC4O15439 1325 aa23.3■■□□□ 1.32
HDAC5-209ENST00000588703 COL4A5P29400 1685 aa23.29■■□□□ 1.32
HDAC5-209ENST00000588703 PPEF1O14829 653 aaPredicted RBP23.29■■□□□ 1.32
HDAC5-209ENST00000588703 GOLGA2Q08379 1002 aa23.29■■□□□ 1.32
HDAC5-209ENST00000588703 CCDC30Q5VVM6 783 aa23.29■■□□□ 1.32
HDAC5-209ENST00000588703 VEGFAP15692 232 aaPredicted RBP23.28■■□□□ 1.32
HDAC5-209ENST00000588703 TRIM28Q13263 835 aaKnown RBP23.28■■□□□ 1.32
HDAC5-209ENST00000588703 CC2D2BQ6DHV5 1058 aa23.28■■□□□ 1.32
HDAC5-209ENST00000588703 DPY19L2Q6NUT2 758 aa23.28■■□□□ 1.32
HDAC5-209ENST00000588703 PSMD1Q99460 953 aa23.28■■□□□ 1.32
HDAC5-209ENST00000588703 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
HDAC5-209ENST00000588703 CACNA1FO60840 1977 aa23.27■■□□□ 1.32
HDAC5-209ENST00000588703 RIC3Q7Z5B4 369 aa23.27■■□□□ 1.32
HDAC5-209ENST00000588703 FAM9BQ8IZU0 186 aa23.27■■□□□ 1.32
HDAC5-209ENST00000588703 FANCIQ9NVI1 1328 aa23.27■■□□□ 1.32
HDAC5-209ENST00000588703 TCERG1O14776 1098 aaKnown RBP23.26■■□□□ 1.31
HDAC5-209ENST00000588703 DDNO94850 711 aaPredicted RBP23.26■■□□□ 1.31
HDAC5-209ENST00000588703 IARSP41252 1262 aaKnown RBP23.26■■□□□ 1.31
HDAC5-209ENST00000588703 FAM89AQ96GI7 184 aa23.26■■□□□ 1.31
HDAC5-209ENST00000588703 COL4A1P02462 1669 aa23.25■■□□□ 1.31
HDAC5-209ENST00000588703 LRRC37AA6NMS7 1700 aa23.25■■□□□ 1.31
HDAC5-209ENST00000588703 SCN4AP35499 1836 aa23.25■■□□□ 1.31
HDAC5-209ENST00000588703 TWISTNBQ3B726 338 aaPredicted RBP23.25■■□□□ 1.31
HDAC5-209ENST00000588703 WDR63Q8IWG1 891 aa23.25■■□□□ 1.31
HDAC5-209ENST00000588703 CHMP4AQ9BY43 222 aa23.25■■□□□ 1.31
HDAC5-209ENST00000588703 ZNF541Q9H0D2 1346 aa23.25■■□□□ 1.31
HDAC5-209ENST00000588703 MYD88Q99836 296 aa23.24■■□□□ 1.31
HDAC5-209ENST00000588703 ATP6V0A2Q9Y487 856 aa23.24■■□□□ 1.31
HDAC5-209ENST00000588703 FSTL1Q12841 308 aa23.23■■□□□ 1.31
HDAC5-209ENST00000588703 GRIPAP1Q4V328 841 aa23.23■■□□□ 1.31
HDAC5-209ENST00000588703 RTL5Q5HYW3 569 aaPredicted RBP23.22■■□□□ 1.31
HDAC5-209ENST00000588703 DDX46Q7L014 1031 aaKnown RBP23.22■■□□□ 1.31
HDAC5-209ENST00000588703 SPINK5Q9NQ38 1064 aaPredicted RBP23.22■■□□□ 1.31
HDAC5-209ENST00000588703 FZD9O00144 591 aa23.21■■□□□ 1.31
HDAC5-209ENST00000588703 DDX58O95786 925 aaKnown RBP23.21■■□□□ 1.31
HDAC5-209ENST00000588703 GRAPQ13588 217 aa23.21■■□□□ 1.31
HDAC5-209ENST00000588703 SF3B3Q15393 1217 aaKnown RBP23.21■■□□□ 1.31
HDAC5-209ENST00000588703 GRAPLQ8TC17 118 aaPredicted RBP23.21■■□□□ 1.31
HDAC5-209ENST00000588703 METTL22Q9BUU2 404 aaPredicted RBP23.21■■□□□ 1.31
HDAC5-209ENST00000588703 STK31Q9BXU1 1019 aa23.21■■□□□ 1.31
HDAC5-209ENST00000588703 IRS4O14654 1257 aaPredicted RBP23.2■■□□□ 1.3
HDAC5-209ENST00000588703 BBOX1O75936 387 aa23.2■■□□□ 1.3
HDAC5-209ENST00000588703 G2E3Q7L622 706 aa23.2■■□□□ 1.3
HDAC5-209ENST00000588703 ZBTB38Q8NAP3 1195 aaPredicted RBP23.2■■□□□ 1.3
HDAC5-209ENST00000588703 SMC1BQ8NDV3 1235 aa23.2■■□□□ 1.3
HDAC5-209ENST00000588703 L3MBTL3Q96JM7 780 aaPredicted RBP23.2■■□□□ 1.3
HDAC5-209ENST00000588703 MAP3K2Q9Y2U5 619 aa23.2■■□□□ 1.3
HDAC5-209ENST00000588703 DUOX1Q9NRD9 1551 aa23.19■■□□□ 1.3
HDAC5-209ENST00000588703 APLP1P51693 650 aa23.19■■□□□ 1.3
HDAC5-209ENST00000588703 CCDC191Q8NCU4 936 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms