RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 COL5A2P05997 1499 aaPredicted RBP9.02□□□□□ -0.97
ZNF554-202ENST00000588534 NRKQ7Z2Y5 1582 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 PCCAP05165 728 aaPredicted RBP9.02□□□□□ -0.97
ZNF554-202ENST00000588534 PTMSP20962 102 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 CRKLP46109 303 aaKnown RBP9.02□□□□□ -0.97
ZNF554-202ENST00000588534 CNBD1Q8NA66 436 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 SLIT3O75094 1523 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 NEURL1BA8MQ27 555 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 MCM2P49736 904 aa9.02□□□□□ -0.97
ZNF554-202ENST00000588534 CWF19L2Q2TBE0 894 aaKnown RBP9.02□□□□□ -0.97
ZNF554-202ENST00000588534 MON2Q7Z3U7 1717 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 ANKIB1Q9P2G1 1089 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 PCDHB15Q9Y5E8 787 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 BEND3Q5T5X7 828 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
ZNF554-202ENST00000588534 SPTY2D1Q68D10 685 aaPredicted RBP9.01□□□□□ -0.97
ZNF554-202ENST00000588534 EVI5LQ96CN4 794 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 RBM17Q96I25 401 aaKnown RBP9.01□□□□□ -0.97
ZNF554-202ENST00000588534 KAT6BQ8WYB5 2073 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 TTC41PQ6P2S7 1318 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 RPS6KA4O75676 772 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 BMP2KLQ5H9B9 411 aa9.01□□□□□ -0.97
ZNF554-202ENST00000588534 ZBTB38Q8NAP3 1195 aaPredicted RBP9.01□□□□□ -0.97
ZNF554-202ENST00000588534 FBXW7Q969H0 707 aa9□□□□□ -0.97
ZNF554-202ENST00000588534 TOMM22Q9NS69 142 aa9□□□□□ -0.97
ZNF554-202ENST00000588534 MAP3K12Q12852 859 aa9□□□□□ -0.97
ZNF554-202ENST00000588534 ZGPATQ8N5A5 531 aaKnown RBP9□□□□□ -0.97
ZNF554-202ENST00000588534 C22orf23Q9BZE7 217 aa9□□□□□ -0.97
ZNF554-202ENST00000588534 TRIM37O94972 964 aa9□□□□□ -0.97
ZNF554-202ENST00000588534 LDHCP07864 332 aa9□□□□□ -0.97
ZNF554-202ENST00000588534 PIP4K2AP48426 406 aaPredicted RBP9□□□□□ -0.97
ZNF554-202ENST00000588534 RALYLQ86SE5 291 aaKnown RBP9□□□□□ -0.97
ZNF554-202ENST00000588534 CCDC85AQ96PX6 553 aaPredicted RBP9□□□□□ -0.97
ZNF554-202ENST00000588534 ERICH2A1L162 156 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 ZFYP08048 801 aaPredicted RBP8.99□□□□□ -0.97
ZNF554-202ENST00000588534 KRT32Q14532 448 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 ATP2B3Q16720 1220 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 EYA2O00167 538 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 FKBP4Q02790 459 aaKnown RBP eCLIP8.99□□□□□ -0.97
ZNF554-202ENST00000588534 LRP2BPQ9P2M1 347 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 TMC4Q7Z404 712 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 ANP32BQ92688 251 aaKnown RBP8.99□□□□□ -0.97
ZNF554-202ENST00000588534 EYA3Q99504 573 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 PPP1R1BQ9UD71 204 aaPredicted RBP8.99□□□□□ -0.97
ZNF554-202ENST00000588534 NALCNQ8IZF0 1738 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 AOX1Q06278 1338 aa8.99□□□□□ -0.97
ZNF554-202ENST00000588534 ZBTB22O15209 634 aa8.98□□□□□ -0.97
ZNF554-202ENST00000588534 SART3Q15020 963 aaKnown RBP8.98□□□□□ -0.97
ZNF554-202ENST00000588534 MARCH10Q8NA82 808 aaPredicted RBP8.98□□□□□ -0.97
ZNF554-202ENST00000588534 BICC1Q9H694 974 aaKnown RBP8.98□□□□□ -0.97
ZNF554-202ENST00000588534 ZBTB1Q9Y2K1 713 aa8.98□□□□□ -0.97
ZNF554-202ENST00000588534 ANKRD26Q9UPS8 1709 aa8.98□□□□□ -0.97
ZNF554-202ENST00000588534 NUTM1Q86Y26 1132 aa8.98□□□□□ -0.97
ZNF554-202ENST00000588534 USP44Q9H0E7 712 aa8.98□□□□□ -0.97
ZNF554-202ENST00000588534 NOP58Q9Y2X3 529 aaKnown RBP8.98□□□□□ -0.97
ZNF554-202ENST00000588534 PDE6BP35913 854 aa8.98□□□□□ -0.97
ZNF554-202ENST00000588534 TRIM28Q13263 835 aaKnown RBP8.98□□□□□ -0.97
ZNF554-202ENST00000588534 RABEP1Q15276 862 aa8.98□□□□□ -0.97
ZNF554-202ENST00000588534 SETD1AO15047 1707 aaKnown RBP8.98□□□□□ -0.97
ZNF554-202ENST00000588534 MAP2P11137 1827 aaKnown RBP8.98□□□□□ -0.97
ZNF554-202ENST00000588534 AKAP12Q02952 1782 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 RGL2O15211 777 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 IGHDP01880 384 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 TTLL7Q6ZT98 887 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 FAM89AQ96GI7 184 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 IPO9Q96P70 1041 aaKnown RBP8.97□□□□□ -0.97
ZNF554-202ENST00000588534 CYP19A1P11511 503 aaPredicted RBP8.97□□□□□ -0.97
ZNF554-202ENST00000588534 ALDH1B1P30837 517 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 SSH3Q8TE77 659 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 ZNF622Q969S3 477 aaKnown RBP eCLIP8.97□□□□□ -0.97
ZNF554-202ENST00000588534 ZNF287Q9HBT7 754 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 RAI14Q9P0K7 980 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 MROH5Q6ZUA9 1318 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 TNS2Q63HR2 1409 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 C6orf229H3BNL8 230 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 CDK11BP21127 795 aaKnown RBP8.97□□□□□ -0.97
ZNF554-202ENST00000588534 GSTO1P78417 241 aa8.97□□□□□ -0.97
ZNF554-202ENST00000588534 MED1Q15648 1581 aaPredicted RBP8.97□□□□□ -0.97
ZNF554-202ENST00000588534 ANKRD1Q15327 319 aa8.96□□□□□ -0.97
ZNF554-202ENST00000588534 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.97
ZNF554-202ENST00000588534 BACH2Q9BYV9 841 aa8.96□□□□□ -0.97
ZNF554-202ENST00000588534 CCDC8Q9H0W5 538 aaPredicted RBP8.96□□□□□ -0.97
ZNF554-202ENST00000588534 GNL2Q13823 731 aaKnown RBP8.96□□□□□ -0.97
ZNF554-202ENST00000588534 ZNF804AQ7Z570 1209 aa8.96□□□□□ -0.97
ZNF554-202ENST00000588534 CCDC125Q86Z20 511 aa8.96□□□□□ -0.97
ZNF554-202ENST00000588534 GBP4Q96PP9 640 aa8.96□□□□□ -0.97
ZNF554-202ENST00000588534 TMOD2Q9NZR1 351 aa8.96□□□□□ -0.97
ZNF554-202ENST00000588534 NARFQ9UHQ1 456 aa8.96□□□□□ -0.97
ZNF554-202ENST00000588534 ITGA6P23229 1130 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 SSFA2P28290 1259 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 PDE1AP54750 535 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 AKAP17AQ02040 695 aaKnown RBP8.96□□□□□ -0.98
ZNF554-202ENST00000588534 TTC22Q5TAA0 569 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 SUPT20HQ8NEM7 779 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 SUCLG2Q96I99 432 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 NFAT5O94916 1531 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 H0YIN7 160 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 CTSWP56202 376 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 BOLA2Q9H3K6 86 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 TNNQ9UQP3 1299 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms