RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 RTL1A6NKG5 1358 aa9.98□□□□□ -0.81
TPM4-210ENST00000588507 LAMA3Q16787 3333 aa9.97□□□□□ -0.81
TPM4-210ENST00000588507 WTIPA6NIX2 430 aaPredicted RBP9.97□□□□□ -0.81
TPM4-210ENST00000588507 ZBTB7BO15156 539 aaPredicted RBP9.97□□□□□ -0.81
TPM4-210ENST00000588507 TM4SF4P48230 202 aa9.97□□□□□ -0.81
TPM4-210ENST00000588507 ZNF333Q96JL9 665 aa9.97□□□□□ -0.81
TPM4-210ENST00000588507 HTATIP2Q9BUP3 242 aa9.97□□□□□ -0.81
TPM4-210ENST00000588507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.813e-8■■□□□ 13.7
TPM4-210ENST00000588507 NPHP1O15259 732 aa9.96□□□□□ -0.82
TPM4-210ENST00000588507 LARGE2Q8N3Y3 721 aa9.96□□□□□ -0.82
TPM4-210ENST00000588507 R3HDMLQ9H3Y0 253 aa9.96□□□□□ -0.82
TPM4-210ENST00000588507 STAP2Q9UGK3 403 aa9.96□□□□□ -0.82
TPM4-210ENST00000588507 COL15A1P39059 1388 aa9.96□□□□□ -0.82
TPM4-210ENST00000588507 LOC105371045A0A1W2PR82 267 aa9.95□□□□□ -0.82
TPM4-210ENST00000588507 NPR1P16066 1061 aa9.95□□□□□ -0.82
TPM4-210ENST00000588507 ST5P78524 1137 aa9.95□□□□□ -0.82
TPM4-210ENST00000588507 TBC1D9BQ66K14 1250 aa9.95□□□□□ -0.82
TPM4-210ENST00000588507 KRT26Q7Z3Y9 468 aa9.95□□□□□ -0.82
TPM4-210ENST00000588507 HDGFL2Q7Z4V5 671 aaPredicted RBP9.95□□□□□ -0.82
TPM4-210ENST00000588507 NBPF11Q86T75 865 aa9.95□□□□□ -0.82
TPM4-210ENST00000588507 COG3Q96JB2 828 aa9.95□□□□□ -0.82
TPM4-210ENST00000588507 COL4A5P29400 1685 aa9.94□□□□□ -0.82
TPM4-210ENST00000588507 EDC4Q6P2E9 1401 aaKnown RBP9.94□□□□□ -0.82
TPM4-210ENST00000588507 GMPSP49915 693 aaPredicted RBP9.94□□□□□ -0.82
TPM4-210ENST00000588507 LRIT3Q3SXY7 679 aa9.94□□□□□ -0.82
TPM4-210ENST00000588507 ALYREFQ86V81 257 aaKnown RBP9.94□□□□□ -0.82
TPM4-210ENST00000588507 CNBD1Q8NA66 436 aa9.94□□□□□ -0.82
TPM4-210ENST00000588507 TRPM4Q8TD43 1214 aa9.94□□□□□ -0.82
TPM4-210ENST00000588507 HTTP42858 3142 aa9.93□□□□□ -0.82
TPM4-210ENST00000588507 CDHR2Q9BYE9 1310 aa9.93□□□□□ -0.82
TPM4-210ENST00000588507 NIM1KQ8IY84 436 aa9.93□□□□□ -0.82
TPM4-210ENST00000588507 ERO1AQ96HE7 468 aa9.93□□□□□ -0.82
TPM4-210ENST00000588507 A0A1W2PP64 1363 aa9.92□□□□□ -0.82
TPM4-210ENST00000588507 CABP4P57796 275 aa9.92□□□□□ -0.82
TPM4-210ENST00000588507 SREBF2Q12772 1141 aa9.92□□□□□ -0.82
TPM4-210ENST00000588507 RRS1Q15050 365 aaKnown RBP9.92□□□□□ -0.82
TPM4-210ENST00000588507 HSP90AB2PQ58FF8 381 aa9.92□□□□□ -0.82
TPM4-210ENST00000588507 BCL2L13Q9BXK5 485 aa9.92□□□□□ -0.82
TPM4-210ENST00000588507 EFCC1Q9HA90 598 aa9.92□□□□□ -0.82
TPM4-210ENST00000588507 NPC1L1Q9UHC9 1359 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 WASHC2AQ641Q2 1341 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 ADM5C9JUS6 153 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 H7C1D1 291 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 BMP8BP34820 402 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 SLC9C1Q4G0N8 1177 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 DNAJC10Q8IXB1 793 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 GUCD1Q96NT3 240 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 P2RX7Q99572 595 aaKnown RBP9.91□□□□□ -0.82
TPM4-210ENST00000588507 MRC1P22897 1456 aa9.91□□□□□ -0.82
TPM4-210ENST00000588507 TJP1Q07157 1748 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 CENPFP49454 3210 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 TONSLQ96HA7 1378 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 ALDH1A1P00352 501 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 ALDH1B1P30837 517 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 CXCL9Q07325 125 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 CC2D2BQ6DHV5 1058 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 SAMD7Q7Z3H4 446 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 DCPSQ96C86 337 aaKnown RBP9.9□□□□□ -0.82
TPM4-210ENST00000588507 SETDB2Q96T68 719 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 CNOT7Q9UIV1 285 aaKnown RBP9.9□□□□□ -0.82
TPM4-210ENST00000588507 ZBTB1Q9Y2K1 713 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 HCN4Q9Y3Q4 1203 aa9.9□□□□□ -0.82
TPM4-210ENST00000588507 ANKRD26Q9UPS8 1709 aa9.9□□□□□ -0.83
TPM4-210ENST00000588507 A0A087WZG4 1122 aa9.89□□□□□ -0.83
TPM4-210ENST00000588507 MYCP01106 439 aaPredicted RBP9.89□□□□□ -0.83
TPM4-210ENST00000588507 HSP90AB1P08238 724 aaKnown RBP9.89□□□□□ -0.83
TPM4-210ENST00000588507 CYP19A1P11511 503 aaPredicted RBP9.89□□□□□ -0.83
TPM4-210ENST00000588507 BCAMP50895 628 aa9.89□□□□□ -0.83
TPM4-210ENST00000588507 FKBP1BP68106 108 aa9.89□□□□□ -0.83
TPM4-210ENST00000588507 TJAP1Q5JTD0 557 aa9.89□□□□□ -0.83
TPM4-210ENST00000588507 CD99L2Q8TCZ2 262 aa9.89□□□□□ -0.83
TPM4-210ENST00000588507 TMC1Q8TDI8 760 aa9.89□□□□□ -0.83
TPM4-210ENST00000588507 SNED1Q8TER0 1413 aa9.89□□□□□ -0.83
TPM4-210ENST00000588507 IRS2Q9Y4H2 1338 aa9.88□□□□□ -0.83
TPM4-210ENST00000588507 GRIPAP1Q4V328 841 aa9.88□□□□□ -0.83
TPM4-210ENST00000588507 FAM109BQ6ICB4 259 aaPredicted RBP9.88□□□□□ -0.83
TPM4-210ENST00000588507 MAFAQ8NHW3 353 aaPredicted RBP9.88□□□□□ -0.83
TPM4-210ENST00000588507 POLR2AP24928 1970 aaKnown RBP9.87□□□□□ -0.83
TPM4-210ENST00000588507 KLRG2A4D1S0 409 aaPredicted RBP9.87□□□□□ -0.83
TPM4-210ENST00000588507 EVI5O60447 810 aa9.87□□□□□ -0.83
TPM4-210ENST00000588507 GDF15Q99988 308 aa9.87□□□□□ -0.83
TPM4-210ENST00000588507 TERF2IPQ9NYB0 399 aa9.87□□□□□ -0.83
TPM4-210ENST00000588507 ZNRF3Q9ULT6 936 aa9.87□□□□□ -0.83
TPM4-210ENST00000588507 ZBTB12Q9Y330 459 aaPredicted RBP9.87□□□□□ -0.83
TPM4-210ENST00000588507 ZNF609O15014 1411 aa9.87□□□□□ -0.83
TPM4-210ENST00000588507 PPIP5K2O43314 1243 aa9.86□□□□□ -0.83
TPM4-210ENST00000588507 CANXP27824 592 aaKnown RBP9.86□□□□□ -0.83
TPM4-210ENST00000588507 NCAPD2Q15021 1401 aa9.86□□□□□ -0.83
TPM4-210ENST00000588507 TNIP1Q15025 636 aa9.86□□□□□ -0.83
TPM4-210ENST00000588507 UBE2Q1Q7Z7E8 422 aa9.86□□□□□ -0.83
TPM4-210ENST00000588507 SULF1Q8IWU6 871 aa9.86□□□□□ -0.83
TPM4-210ENST00000588507 SHISA4Q96DD7 197 aa9.86□□□□□ -0.83
TPM4-210ENST00000588507 CDCA5Q96FF9 252 aa9.86□□□□□ -0.83
TPM4-210ENST00000588507 MUC3AQ02505 3323 aa9.86□□□□□ -0.83
TPM4-210ENST00000588507 SHTN1A0MZ66 631 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 MKRN3Q13064 507 aaKnown RBP9.85□□□□□ -0.83
TPM4-210ENST00000588507 MICALL2Q8IY33 904 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
TPM4-210ENST00000588507 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms