RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 FERMT3Q86UX7 667 aa18.34■□□□□ 0.53
KDM4B-206ENST00000588361 DDX17Q92841 729 aaKnown RBP18.34■□□□□ 0.53
KDM4B-206ENST00000588361 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
KDM4B-206ENST00000588361 PXDNQ92626 1479 aa18.34■□□□□ 0.53
KDM4B-206ENST00000588361 TTC41PQ6P2S7 1318 aa18.34■□□□□ 0.53
KDM4B-206ENST00000588361 DNM1Q05193 864 aaKnown RBP18.34■□□□□ 0.53
KDM4B-206ENST00000588361 KAZALD1Q96I82 304 aa18.34■□□□□ 0.53
KDM4B-206ENST00000588361 CYP46A1Q9Y6A2 500 aa18.34■□□□□ 0.53
KDM4B-206ENST00000588361 NMIQ13287 307 aaPredicted RBP18.33■□□□□ 0.53
KDM4B-206ENST00000588361 FSD1Q9BTV5 496 aa18.33■□□□□ 0.53
KDM4B-206ENST00000588361 LRRC37A3O60309 1634 aa18.33■□□□□ 0.53
KDM4B-206ENST00000588361 NFATC2IPQ8NCF5 419 aa18.33■□□□□ 0.52
KDM4B-206ENST00000588361 CHMP4AQ9BY43 222 aa18.33■□□□□ 0.52
KDM4B-206ENST00000588361 RBM8AQ9Y5S9 174 aaKnown RBP18.33■□□□□ 0.52
KDM4B-206ENST00000588361 NOLC1Q14978 699 aaKnown RBP eCLIP18.33■□□□□ 0.521e-10■■■■□ 20.4
KDM4B-206ENST00000588361 FAM173BQ6P4H8 233 aa18.33■□□□□ 0.52
KDM4B-206ENST00000588361 BCL11BQ9C0K0 894 aaPredicted RBP18.33■□□□□ 0.52
KDM4B-206ENST00000588361 ZKSCAN1P17029 563 aaPredicted RBP18.32■□□□□ 0.52
KDM4B-206ENST00000588361 STK3Q13188 491 aa18.32■□□□□ 0.52
KDM4B-206ENST00000588361 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
KDM4B-206ENST00000588361 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
KDM4B-206ENST00000588361 MYD88Q99836 296 aa18.32■□□□□ 0.52
KDM4B-206ENST00000588361 TAF6LQ9Y6J9 622 aa18.32■□□□□ 0.52
KDM4B-206ENST00000588361 F13A1P00488 732 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 ME3Q16798 604 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 LINS1Q8NG48 757 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 EVI5LQ96CN4 794 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 DDX58O95786 925 aaKnown RBP18.31■□□□□ 0.52
KDM4B-206ENST00000588361 GIMAP6Q6P9H5 292 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 COPS6Q7L5N1 327 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 CHGBP05060 677 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 KRT28Q7Z3Y7 464 aa18.31■□□□□ 0.52
KDM4B-206ENST00000588361 IGKV5-2P06315 115 aa18.3■□□□□ 0.52
KDM4B-206ENST00000588361 EPHA10Q5JZY3 1008 aa18.3■□□□□ 0.52
KDM4B-206ENST00000588361 CREB3L3Q68CJ9 461 aa18.3■□□□□ 0.52
KDM4B-206ENST00000588361 ERC1Q8IUD2 1116 aa18.3■□□□□ 0.52
KDM4B-206ENST00000588361 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
KDM4B-206ENST00000588361 MTX1Q13505 466 aa18.3■□□□□ 0.52
KDM4B-206ENST00000588361 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
KDM4B-206ENST00000588361 PHF14O94880 888 aa18.29■□□□□ 0.52
KDM4B-206ENST00000588361 FGD1P98174 961 aa18.29■□□□□ 0.52
KDM4B-206ENST00000588361 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
KDM4B-206ENST00000588361 RAPGEF4Q8WZA2 1011 aa18.29■□□□□ 0.52
KDM4B-206ENST00000588361 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
KDM4B-206ENST00000588361 TPCN1Q9ULQ1 816 aa18.29■□□□□ 0.52
KDM4B-206ENST00000588361 ATP5J2-PTCD1G3V325 749 aa18.29■□□□□ 0.52
KDM4B-206ENST00000588361 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
KDM4B-206ENST00000588361 BCL2L12Q9HB09 334 aa18.29■□□□□ 0.52
KDM4B-206ENST00000588361 TCHHQ07283 1943 aa18.29■□□□□ 0.52
KDM4B-206ENST00000588361 U2AF2P26368 475 aaKnown RBP eCLIP18.28■□□□□ 0.52
KDM4B-206ENST00000588361 NEXNQ0ZGT2 675 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 ZNF790Q6PG37 636 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 PDIA6Q15084 440 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 NECTIN1Q15223 517 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 UTP14CQ5TAP6 766 aaKnown RBP18.28■□□□□ 0.52
KDM4B-206ENST00000588361 IL17RAQ96F46 866 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 MARF1Q9Y4F3 1742 aaKnown RBP18.28■□□□□ 0.52
KDM4B-206ENST00000588361 LTN1O94822 1766 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 CCDC183Q5T5S1 534 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 ZSWIM6Q9HCJ5 1215 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 USP16Q9Y5T5 823 aa18.28■□□□□ 0.52
KDM4B-206ENST00000588361 ADCY5O95622 1261 aa18.27■□□□□ 0.52
KDM4B-206ENST00000588361 ST3GAL1Q11201 340 aa18.27■□□□□ 0.52
KDM4B-206ENST00000588361 LARP1BQ659C4 914 aaKnown RBP18.27■□□□□ 0.52
KDM4B-206ENST00000588361 MTMR6Q9Y217 621 aa18.27■□□□□ 0.52
KDM4B-206ENST00000588361 KIF3AQ9Y496 699 aa18.27■□□□□ 0.52
KDM4B-206ENST00000588361 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.52
KDM4B-206ENST00000588361 EPB41L2O43491 1005 aaKnown RBP18.27■□□□□ 0.51
KDM4B-206ENST00000588361 CHRNA2Q15822 529 aa18.27■□□□□ 0.51
KDM4B-206ENST00000588361 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.51
KDM4B-206ENST00000588361 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.51
KDM4B-206ENST00000588361 PIBF1Q8WXW3 757 aa18.27■□□□□ 0.51
KDM4B-206ENST00000588361 CACNA1FO60840 1977 aa18.27■□□□□ 0.51
KDM4B-206ENST00000588361 USP42Q9H9J4 1324 aaKnown RBP18.26■□□□□ 0.51
KDM4B-206ENST00000588361 SLC27A2O14975 620 aa18.26■□□□□ 0.51
KDM4B-206ENST00000588361 UBE2HP62256 183 aa18.26■□□□□ 0.51
KDM4B-206ENST00000588361 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
KDM4B-206ENST00000588361 DNAJC2Q99543 621 aaKnown RBP18.26■□□□□ 0.51
KDM4B-206ENST00000588361 UBE3BQ7Z3V4 1068 aa18.25■□□□□ 0.51
KDM4B-206ENST00000588361 NFAT5O94916 1531 aa18.25■□□□□ 0.51
KDM4B-206ENST00000588361 TUBGCP6Q96RT7 1819 aa18.25■□□□□ 0.51
KDM4B-206ENST00000588361 CAMK4Q16566 473 aa18.25■□□□□ 0.51
KDM4B-206ENST00000588361 LARP1Q6PKG0 1096 aaKnown RBP18.25■□□□□ 0.51
KDM4B-206ENST00000588361 BBXQ8WY36 941 aaPredicted RBP18.25■□□□□ 0.51
KDM4B-206ENST00000588361 TFIP11Q9UBB9 837 aaKnown RBP18.25■□□□□ 0.51
KDM4B-206ENST00000588361 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
KDM4B-206ENST00000588361 ATP6V1DQ9Y5K8 247 aa18.25■□□□□ 0.51
KDM4B-206ENST00000588361 NEURL1BA8MQ27 555 aa18.25■□□□□ 0.51
KDM4B-206ENST00000588361 CCDC129Q6ZRS4 1044 aa18.25■□□□□ 0.51
KDM4B-206ENST00000588361 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
KDM4B-206ENST00000588361 BLOC1S2Q6QNY1 142 aa18.24■□□□□ 0.51
KDM4B-206ENST00000588361 GCKRQ14397 625 aa18.24■□□□□ 0.51
KDM4B-206ENST00000588361 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
KDM4B-206ENST00000588361 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
KDM4B-206ENST00000588361 PPFIA3O75145 1194 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 FOSBP53539 338 aa18.23■□□□□ 0.51
KDM4B-206ENST00000588361 PDCL2Q8N4E4 241 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms