RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SH3TC1Q8TE82 1336 aa11.48□□□□□ -0.57
CIRBP-218ENST00000588344 UBN2Q6ZU65 1347 aa11.47□□□□□ -0.57
CIRBP-218ENST00000588344 NEURL1BA8MQ27 555 aa11.47□□□□□ -0.57
CIRBP-218ENST00000588344 F6X3S4 739 aa11.47□□□□□ -0.57
CIRBP-218ENST00000588344 NTSR2O95665 410 aa11.47□□□□□ -0.57
CIRBP-218ENST00000588344 PCCAP05165 728 aaPredicted RBP11.47□□□□□ -0.57
CIRBP-218ENST00000588344 IGKV5-2P06315 115 aa11.47□□□□□ -0.57
CIRBP-218ENST00000588344 PRR5LQ6MZQ0 368 aa11.47□□□□□ -0.57
CIRBP-218ENST00000588344 KLRG2A4D1S0 409 aaPredicted RBP11.46□□□□□ -0.57
CIRBP-218ENST00000588344 GCKRQ14397 625 aa11.46□□□□□ -0.57
CIRBP-218ENST00000588344 NLRP3Q96P20 1036 aa11.46□□□□□ -0.57
CIRBP-218ENST00000588344 SRCAPQ6ZRS2 3230 aa11.46□□□□□ -0.58
CIRBP-218ENST00000588344 FAM177BA6PVY3 158 aa11.45□□□□□ -0.58
CIRBP-218ENST00000588344 H0YIN7 160 aa11.45□□□□□ -0.58
CIRBP-218ENST00000588344 H7C1W4 665 aa11.45□□□□□ -0.58
CIRBP-218ENST00000588344 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
CIRBP-218ENST00000588344 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
CIRBP-218ENST00000588344 DZIP1LQ8IYY4 767 aaKnown RBP11.45□□□□□ -0.58
CIRBP-218ENST00000588344 SYT17Q9BSW7 474 aa11.45□□□□□ -0.58
CIRBP-218ENST00000588344 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
CIRBP-218ENST00000588344 C9orf78Q9NZ63 289 aaPredicted RBP11.45□□□□□ -0.58
CIRBP-218ENST00000588344 TUBGCP6Q96RT7 1819 aa11.44□□□□□ -0.58
CIRBP-218ENST00000588344 C4AP0C0L4 1744 aa11.44□□□□□ -0.58
CIRBP-218ENST00000588344 CDHR2Q9BYE9 1310 aa11.44□□□□□ -0.58
CIRBP-218ENST00000588344 IRS4O14654 1257 aaPredicted RBP11.44□□□□□ -0.58
CIRBP-218ENST00000588344 TRIM27P14373 513 aa11.44□□□□□ -0.58
CIRBP-218ENST00000588344 PDE3AQ14432 1141 aa11.44□□□□□ -0.58
CIRBP-218ENST00000588344 CWF19L2Q2TBE0 894 aaKnown RBP11.44□□□□□ -0.58
CIRBP-218ENST00000588344 ERFEQ4G0M1 354 aa11.44□□□□□ -0.58
CIRBP-218ENST00000588344 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
CIRBP-218ENST00000588344 CHMP4BQ9H444 224 aaKnown RBP11.44□□□□□ -0.58
CIRBP-218ENST00000588344 SCN7AQ01118 1682 aa11.43□□□□□ -0.58
CIRBP-218ENST00000588344 ABCC4O15439 1325 aa11.43□□□□□ -0.58
CIRBP-218ENST00000588344 GRM8O00222 908 aa11.43□□□□□ -0.58
CIRBP-218ENST00000588344 PDE8AO60658 829 aa11.43□□□□□ -0.58
CIRBP-218ENST00000588344 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
CIRBP-218ENST00000588344 KLHL34Q8N239 644 aa11.43□□□□□ -0.58
CIRBP-218ENST00000588344 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
CIRBP-218ENST00000588344 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
CIRBP-218ENST00000588344 UTYO14607 1347 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 DCAF8L1A6NGE4 600 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 GNAI3P08754 354 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 SRGNP10124 158 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 NPR1P16066 1061 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 ALDH1B1P30837 517 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 CRY2Q49AN0 593 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 STYK1Q6J9G0 422 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 C2CD5Q86YS7 1000 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 CNKSR1Q969H4 720 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 MASTLQ96GX5 879 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 RBM17Q96I25 401 aaKnown RBP11.42□□□□□ -0.58
CIRBP-218ENST00000588344 PLA2G12BQ9BX93 195 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 PXDNLA1KZ92 1463 aa11.42□□□□□ -0.58
CIRBP-218ENST00000588344 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
CIRBP-218ENST00000588344 COL24A1Q17RW2 1714 aa11.41□□□□□ -0.58
CIRBP-218ENST00000588344 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
CIRBP-218ENST00000588344 HOXA10P31260 410 aaPredicted RBP11.41□□□□□ -0.58
CIRBP-218ENST00000588344 SF3B3Q15393 1217 aaKnown RBP11.41□□□□□ -0.58
CIRBP-218ENST00000588344 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
CIRBP-218ENST00000588344 UBE3BQ7Z3V4 1068 aa11.41□□□□□ -0.58
CIRBP-218ENST00000588344 RPGRQ92834 1020 aaKnown RBP11.41□□□□□ -0.58
CIRBP-218ENST00000588344 LRP5O75197 1615 aa11.41□□□□□ -0.58
CIRBP-218ENST00000588344 BCORQ6W2J9 1755 aa11.41□□□□□ -0.58
CIRBP-218ENST00000588344 A0A0G2JLW4 131 aa11.4□□□□□ -0.58
CIRBP-218ENST00000588344 DPEP1P16444 411 aa11.4□□□□□ -0.58
CIRBP-218ENST00000588344 CASP7P55210 303 aa11.4□□□□□ -0.58
CIRBP-218ENST00000588344 DDX46Q7L014 1031 aaKnown RBP11.4□□□□□ -0.58
CIRBP-218ENST00000588344 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
CIRBP-218ENST00000588344 TTLL6Q8N841 843 aa11.4□□□□□ -0.58
CIRBP-218ENST00000588344 CLUAP1Q96AJ1 413 aa11.4□□□□□ -0.58
CIRBP-218ENST00000588344 CRAMP1Q96RY5 1269 aa11.4□□□□□ -0.58
CIRBP-218ENST00000588344 USP44Q9H0E7 712 aa11.4□□□□□ -0.58
CIRBP-218ENST00000588344 BBOX1O75936 387 aa11.39□□□□□ -0.59
CIRBP-218ENST00000588344 CSF1RP07333 972 aa11.39□□□□□ -0.59
CIRBP-218ENST00000588344 UBTFL1P0CB47 393 aaPredicted RBP11.39□□□□□ -0.59
CIRBP-218ENST00000588344 CTSWP56202 376 aa11.39□□□□□ -0.59
CIRBP-218ENST00000588344 GRIPAP1Q4V328 841 aa11.39□□□□□ -0.59
CIRBP-218ENST00000588344 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
CIRBP-218ENST00000588344 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
CIRBP-218ENST00000588344 TMC4Q7Z404 712 aa11.39□□□□□ -0.59
CIRBP-218ENST00000588344 SYNE4Q8N205 404 aa11.39□□□□□ -0.59
CIRBP-218ENST00000588344 TMEM57Q8N5G2 664 aa11.39□□□□□ -0.59
CIRBP-218ENST00000588344 ZNF622Q969S3 477 aaKnown RBP eCLIP11.39□□□□□ -0.59
CIRBP-218ENST00000588344 TMX4Q9H1E5 349 aaPredicted RBP11.39□□□□□ -0.59
CIRBP-218ENST00000588344 NBPF7P0C2Y1 421 aaPredicted RBP11.38□□□□□ -0.59
CIRBP-218ENST00000588344 KCNA3P22001 575 aa11.38□□□□□ -0.59
CIRBP-218ENST00000588344 RRP1P56182 461 aaKnown RBP11.38□□□□□ -0.59
CIRBP-218ENST00000588344 SOGA3Q5TF21 947 aa11.38□□□□□ -0.59
CIRBP-218ENST00000588344 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
CIRBP-218ENST00000588344 NLGN2Q8NFZ4 835 aa11.38□□□□□ -0.59
CIRBP-218ENST00000588344 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
CIRBP-218ENST00000588344 DDX19BQ9UMR2 479 aa11.38□□□□□ -0.59
CIRBP-218ENST00000588344 ABCC12Q96J65 1359 aa11.38□□□□□ -0.59
CIRBP-218ENST00000588344 ZBTB7BO15156 539 aaPredicted RBP11.37□□□□□ -0.59
CIRBP-218ENST00000588344 PLIN1O60240 522 aa11.37□□□□□ -0.59
CIRBP-218ENST00000588344 GRIN3BO60391 1043 aa11.37□□□□□ -0.59
CIRBP-218ENST00000588344 GNAI2P04899 355 aa11.37□□□□□ -0.59
CIRBP-218ENST00000588344 CENPBP07199 599 aaPredicted RBP11.37□□□□□ -0.59
CIRBP-218ENST00000588344 CHRNA5P30532 468 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms