RNA–Protein interactions for RNA: ENST00000587958.1

GRN-210, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-210ENST00000587958 NLRP10Q86W26 655 aa19.38■□□□□ 0.69
GRN-210ENST00000587958 RNF181Q9P0P0 153 aa19.38■□□□□ 0.69
GRN-210ENST00000587958 DDX60Q8IY21 1712 aaKnown RBP19.37■□□□□ 0.69
GRN-210ENST00000587958 HCLS1P14317 486 aaPredicted RBP19.37■□□□□ 0.69
GRN-210ENST00000587958 PLBD2Q8NHP8 589 aa19.37■□□□□ 0.69
GRN-210ENST00000587958 JARID2Q92833 1246 aaPredicted RBP19.37■□□□□ 0.69
GRN-210ENST00000587958 HYPKQ9NX55 129 aa19.37■□□□□ 0.69
GRN-210ENST00000587958 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
GRN-210ENST00000587958 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
GRN-210ENST00000587958 C7orf43Q8WVR3 580 aa19.36■□□□□ 0.69
GRN-210ENST00000587958 UTP14AQ9BVJ6 771 aaKnown RBP19.36■□□□□ 0.69
GRN-210ENST00000587958 NYXQ9GZU5 481 aa19.36■□□□□ 0.69
GRN-210ENST00000587958 TIAM2Q8IVF5 1701 aa19.35■□□□□ 0.69
GRN-210ENST00000587958 NPR1P16066 1061 aa19.35■□□□□ 0.69
GRN-210ENST00000587958 CNKSR1Q969H4 720 aa19.35■□□□□ 0.69
GRN-210ENST00000587958 COL4A1P02462 1669 aa19.35■□□□□ 0.69
GRN-210ENST00000587958 IL16Q14005 1332 aa19.34■□□□□ 0.69
GRN-210ENST00000587958 DICER1Q9UPY3 1922 aaKnown RBP19.34■□□□□ 0.69
GRN-210ENST00000587958 PPP1R42Q7Z4L9 355 aa19.34■□□□□ 0.69
GRN-210ENST00000587958 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
GRN-210ENST00000587958 ISCA1Q9BUE6 129 aa19.34■□□□□ 0.69
GRN-210ENST00000587958 CRY2Q49AN0 593 aa19.33■□□□□ 0.68
GRN-210ENST00000587958 PARP10Q53GL7 1025 aa19.33■□□□□ 0.68
GRN-210ENST00000587958 CCDC30Q5VVM6 783 aa19.33■□□□□ 0.68
GRN-210ENST00000587958 RIC3Q7Z5B4 369 aa19.33■□□□□ 0.68
GRN-210ENST00000587958 MIER1Q8N108 512 aa19.33■□□□□ 0.68
GRN-210ENST00000587958 FAM89AQ96GI7 184 aa19.33■□□□□ 0.68
GRN-210ENST00000587958 GPBP1L1Q9HC44 474 aaPredicted RBP19.33■□□□□ 0.68
GRN-210ENST00000587958 TRMT112Q9UI30 125 aaKnown RBP19.33■□□□□ 0.68
GRN-210ENST00000587958 VAMP4O75379 141 aa19.32■□□□□ 0.68
GRN-210ENST00000587958 MYD88Q99836 296 aa19.32■□□□□ 0.68
GRN-210ENST00000587958 NMRK2Q9NPI5 230 aa19.32■□□□□ 0.68
GRN-210ENST00000587958 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
GRN-210ENST00000587958 ZNF521Q96K83 1311 aa19.31■□□□□ 0.68
GRN-210ENST00000587958 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
GRN-210ENST00000587958 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
GRN-210ENST00000587958 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
GRN-210ENST00000587958 HSP90AB3PQ58FF7 597 aa19.3■□□□□ 0.68
GRN-210ENST00000587958 SLC10A5Q5PT55 438 aa19.3■□□□□ 0.68
GRN-210ENST00000587958 RPGRQ92834 1020 aaKnown RBP19.3■□□□□ 0.68
GRN-210ENST00000587958 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
GRN-210ENST00000587958 LMNB1P20700 586 aa19.29■□□□□ 0.68
GRN-210ENST00000587958 GOLGA2Q08379 1002 aa19.29■□□□□ 0.68
GRN-210ENST00000587958 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
GRN-210ENST00000587958 RIC1Q4ADV7 1423 aa19.28■□□□□ 0.68
GRN-210ENST00000587958 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
GRN-210ENST00000587958 KIF3CO14782 793 aa19.28■□□□□ 0.68
GRN-210ENST00000587958 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
GRN-210ENST00000587958 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
GRN-210ENST00000587958 ZNF277Q9NRM2 450 aaPredicted RBP19.28■□□□□ 0.68
GRN-210ENST00000587958 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
GRN-210ENST00000587958 CACNA1FO60840 1977 aa19.27■□□□□ 0.68
GRN-210ENST00000587958 HOXA10P31260 410 aaPredicted RBP19.27■□□□□ 0.68
GRN-210ENST00000587958 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.68
GRN-210ENST00000587958 TAOK3Q9H2K8 898 aa19.27■□□□□ 0.68
GRN-210ENST00000587958 ABCC4O15439 1325 aa19.26■□□□□ 0.67
GRN-210ENST00000587958 SNED1Q8TER0 1413 aa19.26■□□□□ 0.67
GRN-210ENST00000587958 IGKV5-2P06315 115 aa19.26■□□□□ 0.67
GRN-210ENST00000587958 ALDH1B1P30837 517 aa19.26■□□□□ 0.67
GRN-210ENST00000587958 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
GRN-210ENST00000587958 METTL22Q9BUU2 404 aaPredicted RBP19.26■□□□□ 0.67
GRN-210ENST00000587958 STK31Q9BXU1 1019 aa19.26■□□□□ 0.67
GRN-210ENST00000587958 COL4A5P29400 1685 aa19.25■□□□□ 0.67
GRN-210ENST00000587958 CCER2I3L3R5 266 aa19.25■□□□□ 0.67
GRN-210ENST00000587958 CWF19L2Q2TBE0 894 aaKnown RBP19.25■□□□□ 0.67
GRN-210ENST00000587958 CCDC93Q567U6 631 aa19.25■□□□□ 0.67
GRN-210ENST00000587958 KSR2Q6VAB6 950 aa19.25■□□□□ 0.67
GRN-210ENST00000587958 RBM17Q96I25 401 aaKnown RBP19.25■□□□□ 0.67
GRN-210ENST00000587958 RRAGCQ9HB90 399 aa19.25■□□□□ 0.67
GRN-210ENST00000587958 CCDC85AQ96PX6 553 aaPredicted RBP19.24■□□□□ 0.67
GRN-210ENST00000587958 CRAMP1Q96RY5 1269 aa19.24■□□□□ 0.67
GRN-210ENST00000587958 F6X3S4 739 aa19.23■□□□□ 0.67
GRN-210ENST00000587958 PPEF1O14829 653 aaPredicted RBP19.23■□□□□ 0.67
GRN-210ENST00000587958 FLIIQ13045 1269 aa19.23■□□□□ 0.67
GRN-210ENST00000587958 TRIM28Q13263 835 aaKnown RBP19.23■□□□□ 0.67
GRN-210ENST00000587958 IRS4O14654 1257 aaPredicted RBP19.22■□□□□ 0.67
GRN-210ENST00000587958 FKBP4Q02790 459 aaKnown RBP eCLIP19.22■□□□□ 0.67
GRN-210ENST00000587958 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
GRN-210ENST00000587958 LTBP3Q9NS15 1303 aa19.22■□□□□ 0.67
GRN-210ENST00000587958 SPEF2Q9C093 1822 aa19.21■□□□□ 0.67
GRN-210ENST00000587958 DDX58O95786 925 aaKnown RBP19.21■□□□□ 0.67
GRN-210ENST00000587958 CELF1Q92879 486 aaKnown RBP19.21■□□□□ 0.67
GRN-210ENST00000587958 DDNO94850 711 aaPredicted RBP19.2■□□□□ 0.66
GRN-210ENST00000587958 SLFN5Q08AF3 891 aa19.2■□□□□ 0.66
GRN-210ENST00000587958 FKBP5Q13451 457 aaPredicted RBP19.2■□□□□ 0.66
GRN-210ENST00000587958 ZBTB38Q8NAP3 1195 aaPredicted RBP19.2■□□□□ 0.66
GRN-210ENST00000587958 SEC31BQ9NQW1 1179 aa19.2■□□□□ 0.66
GRN-210ENST00000587958 CWC25Q9NXE8 425 aaPredicted RBP19.2■□□□□ 0.66
GRN-210ENST00000587958 RNF123Q5XPI4 1314 aa19.2■□□□□ 0.66
GRN-210ENST00000587958 MYH3P11055 1940 aa19.19■□□□□ 0.66
GRN-210ENST00000587958 GLTPD2A6NH11 291 aa19.19■□□□□ 0.66
GRN-210ENST00000587958 POTECB2RU33 542 aa19.19■□□□□ 0.66
GRN-210ENST00000587958 CCDC191Q8NCU4 936 aa19.19■□□□□ 0.66
GRN-210ENST00000587958 ZNF541Q9H0D2 1346 aa19.19■□□□□ 0.66
GRN-210ENST00000587958 NEURL1BA8MQ27 555 aa19.18■□□□□ 0.66
GRN-210ENST00000587958 SOGA3Q5TF21 947 aa19.18■□□□□ 0.66
GRN-210ENST00000587958 DDX46Q7L014 1031 aaKnown RBP19.18■□□□□ 0.66
GRN-210ENST00000587958 RTKN2Q8IZC4 609 aa19.18■□□□□ 0.66
GRN-210ENST00000587958 ATP6V0A2Q9Y487 856 aa19.18■□□□□ 0.66
GRN-210ENST00000587958 PCCAP05165 728 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms