RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 NFE2L2Q16236 605 aa8.48□□□□□ -1.05
SDF2-205ENST00000587629 EAPPQ56P03 285 aaPredicted RBP8.48□□□□□ -1.05
SDF2-205ENST00000587629 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
SDF2-205ENST00000587629 SLC51AQ86UW1 340 aa8.48□□□□□ -1.05
SDF2-205ENST00000587629 SYNE4Q8N205 404 aa8.48□□□□□ -1.05
SDF2-205ENST00000587629 PNISRQ8TF01 805 aaKnown RBP8.48□□□□□ -1.05
SDF2-205ENST00000587629 PLEKHF1Q96S99 279 aa8.48□□□□□ -1.05
SDF2-205ENST00000587629 FER1L6Q2WGJ9 1857 aa8.48□□□□□ -1.05
SDF2-205ENST00000587629 ZNF541Q9H0D2 1346 aa8.48□□□□□ -1.05
SDF2-205ENST00000587629 HSPA1AP0DMV8 641 aaKnown RBP8.47□□□□□ -1.05
SDF2-205ENST00000587629 HSPA1BP0DMV9 641 aaKnown RBP8.47□□□□□ -1.05
SDF2-205ENST00000587629 EIF2S2P20042 333 aaKnown RBP8.47□□□□□ -1.05
SDF2-205ENST00000587629 ALDH1B1P30837 517 aa8.47□□□□□ -1.05
SDF2-205ENST00000587629 RTKN2Q8IZC4 609 aa8.47□□□□□ -1.05
SDF2-205ENST00000587629 TNS4Q8IZW8 715 aa8.47□□□□□ -1.05
SDF2-205ENST00000587629 RPGRQ92834 1020 aaKnown RBP8.47□□□□□ -1.05
SDF2-205ENST00000587629 TAF1DQ9H5J8 278 aaPredicted RBP8.47□□□□□ -1.05
SDF2-205ENST00000587629 MAP3K15Q6ZN16 1313 aa8.47□□□□□ -1.05
SDF2-205ENST00000587629 MAPK8IP3Q9UPT6 1336 aa8.47□□□□□ -1.05
SDF2-205ENST00000587629 ABCC12Q96J65 1359 aa8.47□□□□□ -1.05
SDF2-205ENST00000587629 IQCA1LA6NCM1 817 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 ERVV-1B6SEH8 477 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 IARSP41252 1262 aaKnown RBP8.46□□□□□ -1.06
SDF2-205ENST00000587629 SUSD4Q5VX71 490 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 NECTIN2Q92692 538 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 ZNF428Q96B54 188 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 NYXQ9GZU5 481 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 CREBZFQ9NS37 354 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 TSPYL4Q9UJ04 414 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 HACL1Q9UJ83 578 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 UBN2Q6ZU65 1347 aa8.46□□□□□ -1.06
SDF2-205ENST00000587629 DICER1Q9UPY3 1922 aaKnown RBP8.45□□□□□ -1.06
SDF2-205ENST00000587629 RGL2O15211 777 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 ANXA1P04083 346 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 EPHX2P34913 555 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 RIPK4P57078 832 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 C3orf67Q6ZVT6 689 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 LDHDQ86WU2 507 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 L3MBTL3Q96JM7 780 aaPredicted RBP8.45□□□□□ -1.06
SDF2-205ENST00000587629 PNNQ9H307 717 aaKnown RBP8.45□□□□□ -1.06
SDF2-205ENST00000587629 GJA3Q9Y6H8 435 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 RNF123Q5XPI4 1314 aa8.45□□□□□ -1.06
SDF2-205ENST00000587629 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
SDF2-205ENST00000587629 AIMP1Q12904 312 aaKnown RBP8.44□□□□□ -1.06
SDF2-205ENST00000587629 PROSER3Q2NL68 480 aa8.44□□□□□ -1.06
SDF2-205ENST00000587629 CRY2Q49AN0 593 aa8.44□□□□□ -1.06
SDF2-205ENST00000587629 MAP1SQ66K74 1059 aaPredicted RBP8.44□□□□□ -1.06
SDF2-205ENST00000587629 ZNF34Q8IZ26 560 aa8.44□□□□□ -1.06
SDF2-205ENST00000587629 JDP2Q8WYK2 163 aa8.44□□□□□ -1.06
SDF2-205ENST00000587629 RBM17Q96I25 401 aaKnown RBP8.44□□□□□ -1.06
SDF2-205ENST00000587629 DLG5Q8TDM6 1919 aa8.44□□□□□ -1.06
SDF2-205ENST00000587629 ARFGEF2Q9Y6D5 1785 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 FZD9O00144 591 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 PPEF1O14829 653 aaPredicted RBP8.43□□□□□ -1.06
SDF2-205ENST00000587629 NTSR2O95665 410 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
SDF2-205ENST00000587629 EIF6P56537 245 aaKnown RBP8.43□□□□□ -1.06
SDF2-205ENST00000587629 PDIA6Q15084 440 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 GIGYF2Q6Y7W6 1299 aaKnown RBP8.43□□□□□ -1.06
SDF2-205ENST00000587629 CCDC146Q8IYE0 955 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 CNTROBQ8N137 903 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 GPC2Q8N158 579 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 LARGE2Q8N3Y3 721 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 PSMD1Q99460 953 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
SDF2-205ENST00000587629 PASKQ96RG2 1323 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 LAMB4A4D0S4 1761 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 KDM3BQ7LBC6 1761 aa8.43□□□□□ -1.06
SDF2-205ENST00000587629 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
SDF2-205ENST00000587629 HCLS1P14317 486 aaPredicted RBP8.42□□□□□ -1.06
SDF2-205ENST00000587629 TMPOP42166 694 aaKnown RBP8.42□□□□□ -1.06
SDF2-205ENST00000587629 EPS15P42566 896 aa8.42□□□□□ -1.06
SDF2-205ENST00000587629 VEGFBP49765 207 aa8.42□□□□□ -1.06
SDF2-205ENST00000587629 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
SDF2-205ENST00000587629 DDX10Q13206 875 aaKnown RBP8.42□□□□□ -1.06
SDF2-205ENST00000587629 KRT24Q2M2I5 525 aa8.42□□□□□ -1.06
SDF2-205ENST00000587629 PPP1R42Q7Z4L9 355 aa8.42□□□□□ -1.06
SDF2-205ENST00000587629 PNMA8AQ86V59 439 aaPredicted RBP8.42□□□□□ -1.06
SDF2-205ENST00000587629 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
SDF2-205ENST00000587629 CRAMP1Q96RY5 1269 aa8.42□□□□□ -1.06
SDF2-205ENST00000587629 UTP14AQ9BVJ6 771 aaKnown RBP8.42□□□□□ -1.06
SDF2-205ENST00000587629 NUP98P52948 1817 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 COL4A5P29400 1685 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 CNTNAP1P78357 1384 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 FOXN1O15353 648 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 PPIP5K2O43314 1243 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 LMOD1P29536 600 aaPredicted RBP8.41□□□□□ -1.06
SDF2-205ENST00000587629 AOC3Q16853 763 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 PARP10Q53GL7 1025 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 CC2D2BQ6DHV5 1058 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 COPS6Q7L5N1 327 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 LRP10Q7Z4F1 713 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 NIM1KQ8IY84 436 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 XAGE3Q8WTP9 111 aa8.41□□□□□ -1.06
SDF2-205ENST00000587629 TMX4Q9H1E5 349 aaPredicted RBP8.41□□□□□ -1.06
SDF2-205ENST00000587629 ABT1Q9ULW3 272 aaKnown RBP8.41□□□□□ -1.06
SDF2-205ENST00000587629 SNED1Q8TER0 1413 aa8.4□□□□□ -1.06
SDF2-205ENST00000587629 ERBB4Q15303 1308 aa8.4□□□□□ -1.06
SDF2-205ENST00000587629 SCNN1DP51172 638 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms