RNA–Protein interactions for RNA: ENST00000587578.1

SOCS3-202, Transcript of suppressor of cytokine signaling 3, humanhuman

TSL 4

Gene SOCS3, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-202ENST00000587578 PASKQ96RG2 1323 aa23.81■■□□□ 1.4
SOCS3-202ENST00000587578 NIP7Q9Y221 180 aaKnown RBP eCLIP23.8■■□□□ 1.4
SOCS3-202ENST00000587578 CNTNAP1P78357 1384 aa23.79■■□□□ 1.4
SOCS3-202ENST00000587578 ADAMTSL1Q8N6G6 1762 aa23.79■■□□□ 1.4
SOCS3-202ENST00000587578 IQCA1LA6NCM1 817 aa23.79■■□□□ 1.4
SOCS3-202ENST00000587578 FKBP4Q02790 459 aaKnown RBP eCLIP23.79■■□□□ 1.4
SOCS3-202ENST00000587578 HLFQ16534 295 aa23.79■■□□□ 1.4
SOCS3-202ENST00000587578 LDHDQ86WU2 507 aa23.79■■□□□ 1.4
SOCS3-202ENST00000587578 LAMB4A4D0S4 1761 aa23.78■■□□□ 1.4
SOCS3-202ENST00000587578 TPTE2Q6XPS3 522 aa23.77■■□□□ 1.4
SOCS3-202ENST00000587578 SALL2Q9Y467 1007 aaPredicted RBP23.77■■□□□ 1.4
SOCS3-202ENST00000587578 FOXN1O15353 648 aa23.76■■□□□ 1.39
SOCS3-202ENST00000587578 EAPPQ56P03 285 aaPredicted RBP23.76■■□□□ 1.39
SOCS3-202ENST00000587578 MBIPQ9NS73 344 aa23.76■■□□□ 1.39
SOCS3-202ENST00000587578 LAS1LQ9Y4W2 734 aaKnown RBP23.76■■□□□ 1.39
SOCS3-202ENST00000587578 SNED1Q8TER0 1413 aa23.76■■□□□ 1.39
SOCS3-202ENST00000587578 ITGBL1O95965 494 aaPredicted RBP23.75■■□□□ 1.39
SOCS3-202ENST00000587578 ABCC12Q96J65 1359 aa23.75■■□□□ 1.39
SOCS3-202ENST00000587578 HACL1Q9UJ83 578 aa23.74■■□□□ 1.39
SOCS3-202ENST00000587578 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
SOCS3-202ENST00000587578 COL4A5P29400 1685 aa23.73■■□□□ 1.39
SOCS3-202ENST00000587578 RGL2O15211 777 aa23.73■■□□□ 1.39
SOCS3-202ENST00000587578 VEGFBP49765 207 aa23.73■■□□□ 1.39
SOCS3-202ENST00000587578 NUP98P52948 1817 aa23.73■■□□□ 1.39
SOCS3-202ENST00000587578 HOXB7P09629 217 aa23.72■■□□□ 1.39
SOCS3-202ENST00000587578 EPHX2P34913 555 aa23.72■■□□□ 1.39
SOCS3-202ENST00000587578 IARSP41252 1262 aaKnown RBP23.72■■□□□ 1.39
SOCS3-202ENST00000587578 RTKN2Q8IZC4 609 aa23.72■■□□□ 1.39
SOCS3-202ENST00000587578 SYNE4Q8N205 404 aa23.72■■□□□ 1.39
SOCS3-202ENST00000587578 TMEM88BA6NKF7 163 aa23.71■■□□□ 1.39
SOCS3-202ENST00000587578 FZD9O00144 591 aa23.71■■□□□ 1.39
SOCS3-202ENST00000587578 SLC51AQ86UW1 340 aa23.71■■□□□ 1.39
SOCS3-202ENST00000587578 NUTM1Q86Y26 1132 aa23.71■■□□□ 1.39
SOCS3-202ENST00000587578 GOLGA2Q08379 1002 aa23.7■■□□□ 1.38
SOCS3-202ENST00000587578 CLEC11AQ9Y240 323 aa23.7■■□□□ 1.38
SOCS3-202ENST00000587578 ALDH1B1P30837 517 aa23.69■■□□□ 1.38
SOCS3-202ENST00000587578 CRY2Q49AN0 593 aa23.69■■□□□ 1.38
SOCS3-202ENST00000587578 MAP1SQ66K74 1059 aaPredicted RBP23.69■■□□□ 1.38
SOCS3-202ENST00000587578 MYH16Q9H6N6 1097 aa23.69■■□□□ 1.38
SOCS3-202ENST00000587578 LTBP1Q14766 1721 aa23.69■■□□□ 1.38
SOCS3-202ENST00000587578 GTF2E1P29083 439 aaPredicted RBP23.68■■□□□ 1.38
SOCS3-202ENST00000587578 ERBB4Q15303 1308 aa23.67■■□□□ 1.38
SOCS3-202ENST00000587578 E9PSI1 815 aa23.67■■□□□ 1.38
SOCS3-202ENST00000587578 HNRNPUQ00839 825 aaKnown RBP eCLIP23.67■■□□□ 1.38
SOCS3-202ENST00000587578 TTLL7Q6ZT98 887 aa23.67■■□□□ 1.38
SOCS3-202ENST00000587578 SPINK5Q9NQ38 1064 aaPredicted RBP23.67■■□□□ 1.38
SOCS3-202ENST00000587578 FANCIQ9NVI1 1328 aa23.66■■□□□ 1.38
SOCS3-202ENST00000587578 CNTROBQ8N137 903 aa23.66■■□□□ 1.38
SOCS3-202ENST00000587578 GPC2Q8N158 579 aa23.66■■□□□ 1.38
SOCS3-202ENST00000587578 TSR2Q969E8 191 aaKnown RBP23.66■■□□□ 1.38
SOCS3-202ENST00000587578 PSMD1Q99460 953 aa23.66■■□□□ 1.38
SOCS3-202ENST00000587578 CHMP4AQ9BY43 222 aa23.66■■□□□ 1.38
SOCS3-202ENST00000587578 UBN2Q6ZU65 1347 aa23.65■■□□□ 1.38
SOCS3-202ENST00000587578 PRDM10Q9NQV6 1147 aa23.65■■□□□ 1.38
SOCS3-202ENST00000587578 MAP3K15Q6ZN16 1313 aa23.64■■□□□ 1.38
SOCS3-202ENST00000587578 GPTP24298 496 aa23.64■■□□□ 1.37
SOCS3-202ENST00000587578 SLFN5Q08AF3 891 aa23.64■■□□□ 1.37
SOCS3-202ENST00000587578 DUSP27Q5VZP5 1158 aa23.64■■□□□ 1.37
SOCS3-202ENST00000587578 PNMA8AQ86V59 439 aaPredicted RBP23.64■■□□□ 1.37
SOCS3-202ENST00000587578 WBP1LQ9NX94 342 aa23.64■■□□□ 1.37
SOCS3-202ENST00000587578 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 RASSF10A6NK89 507 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 ERVV-1B6SEH8 477 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 CTCFP49711 727 aaPredicted RBP23.63■■□□□ 1.37
SOCS3-202ENST00000587578 KRT24Q2M2I5 525 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 RIC1Q4ADV7 1423 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 TRMT2AQ8IZ69 625 aaKnown RBP23.63■■□□□ 1.37
SOCS3-202ENST00000587578 JDP2Q8WYK2 163 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 AIDAQ96BJ3 306 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 NYXQ9GZU5 481 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 GJA3Q9Y6H8 435 aa23.63■■□□□ 1.37
SOCS3-202ENST00000587578 MYL6BP14649 208 aa23.62■■□□□ 1.37
SOCS3-202ENST00000587578 FMR1Q06787 632 aaKnown RBP eCLIP23.62■■□□□ 1.37
SOCS3-202ENST00000587578 C3orf67Q6ZVT6 689 aa23.62■■□□□ 1.37
SOCS3-202ENST00000587578 C8orf58Q8NAV2 365 aa23.62■■□□□ 1.37
SOCS3-202ENST00000587578 ZBTB3Q9H5J0 574 aa23.62■■□□□ 1.37
SOCS3-202ENST00000587578 HOXA10P31260 410 aaPredicted RBP23.61■■□□□ 1.37
SOCS3-202ENST00000587578 LBX1P52954 281 aa23.61■■□□□ 1.37
SOCS3-202ENST00000587578 SUSD4Q5VX71 490 aa23.61■■□□□ 1.37
SOCS3-202ENST00000587578 RPGRQ92834 1020 aaKnown RBP23.61■■□□□ 1.37
SOCS3-202ENST00000587578 IBTKQ9P2D0 1353 aaPredicted RBP23.61■■□□□ 1.37
SOCS3-202ENST00000587578 SCNN1DP51172 638 aa23.6■■□□□ 1.37
SOCS3-202ENST00000587578 DEFB115Q30KQ5 88 aa23.6■■□□□ 1.37
SOCS3-202ENST00000587578 KIF6Q6ZMV9 814 aa23.6■■□□□ 1.37
SOCS3-202ENST00000587578 TCERG1O14776 1098 aaKnown RBP23.59■■□□□ 1.37
SOCS3-202ENST00000587578 EPS15P42566 896 aa23.59■■□□□ 1.37
SOCS3-202ENST00000587578 EIF6P56537 245 aaKnown RBP23.59■■□□□ 1.37
SOCS3-202ENST00000587578 NTSR2O95665 410 aa23.58■■□□□ 1.37
SOCS3-202ENST00000587578 TWISTNBQ3B726 338 aaPredicted RBP23.58■■□□□ 1.37
SOCS3-202ENST00000587578 HDGFL1Q5TGJ6 251 aa23.58■■□□□ 1.37
SOCS3-202ENST00000587578 CC2D2BQ6DHV5 1058 aa23.58■■□□□ 1.37
SOCS3-202ENST00000587578 ZNF34Q8IZ26 560 aa23.58■■□□□ 1.37
SOCS3-202ENST00000587578 LARGE2Q8N3Y3 721 aa23.58■■□□□ 1.37
SOCS3-202ENST00000587578 TSPYL6Q8N831 410 aa23.58■■□□□ 1.37
SOCS3-202ENST00000587578 DDX21Q9NR30 783 aaKnown RBP eCLIP23.58■■□□□ 1.37
SOCS3-202ENST00000587578 PPEF1O14829 653 aaPredicted RBP23.57■■□□□ 1.36
SOCS3-202ENST00000587578 EIF2S2P20042 333 aaKnown RBP23.57■■□□□ 1.36
SOCS3-202ENST00000587578 EXOSC9Q06265 439 aaKnown RBP23.57■■□□□ 1.36
SOCS3-202ENST00000587578 CDCA7LQ96GN5 454 aa23.57■■□□□ 1.36
SOCS3-202ENST00000587578 ABT1Q9ULW3 272 aaKnown RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms