RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
H3F3B-205ENST00000587171 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
H3F3B-205ENST00000587171 RRAGCQ9HB90 399 aa17.15■□□□□ 0.34
H3F3B-205ENST00000587171 WDR90Q96KV7 1748 aa17.15■□□□□ 0.34
H3F3B-205ENST00000587171 LAMB2P55268 1798 aa17.15■□□□□ 0.34
H3F3B-205ENST00000587171 GNAI1P63096 354 aa17.14■□□□□ 0.33
H3F3B-205ENST00000587171 HSP90AB3PQ58FF7 597 aa17.14■□□□□ 0.33
H3F3B-205ENST00000587171 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
H3F3B-205ENST00000587171 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
H3F3B-205ENST00000587171 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
H3F3B-205ENST00000587171 HOXA10P31260 410 aaPredicted RBP17.13■□□□□ 0.33
H3F3B-205ENST00000587171 OLFM4Q6UX06 510 aa17.13■□□□□ 0.33
H3F3B-205ENST00000587171 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
H3F3B-205ENST00000587171 UTP14AQ9BVJ6 771 aaKnown RBP17.13■□□□□ 0.33
H3F3B-205ENST00000587171 FKBP4Q02790 459 aaKnown RBP eCLIP17.12■□□□□ 0.33
H3F3B-205ENST00000587171 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
H3F3B-205ENST00000587171 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
H3F3B-205ENST00000587171 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
H3F3B-205ENST00000587171 RTKN2Q8IZC4 609 aa17.12■□□□□ 0.33
H3F3B-205ENST00000587171 RPGRQ92834 1020 aaKnown RBP17.12■□□□□ 0.33
H3F3B-205ENST00000587171 VEGFAP15692 232 aaPredicted RBP17.11■□□□□ 0.33
H3F3B-205ENST00000587171 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
H3F3B-205ENST00000587171 C3orf67Q6ZVT6 689 aa17.11■□□□□ 0.33
H3F3B-205ENST00000587171 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
H3F3B-205ENST00000587171 PCNTO95613 3336 aa17.1■□□□□ 0.33
H3F3B-205ENST00000587171 ANP32CO43423 234 aa17.1■□□□□ 0.33
H3F3B-205ENST00000587171 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
H3F3B-205ENST00000587171 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
H3F3B-205ENST00000587171 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
H3F3B-205ENST00000587171 POTECB2RU33 542 aa17.09■□□□□ 0.33
H3F3B-205ENST00000587171 FSTL1Q12841 308 aa17.09■□□□□ 0.33
H3F3B-205ENST00000587171 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
H3F3B-205ENST00000587171 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
H3F3B-205ENST00000587171 ANKRD13DQ6ZTN6 518 aa17.09■□□□□ 0.33
H3F3B-205ENST00000587171 RBM17Q96I25 401 aaKnown RBP17.09■□□□□ 0.33
H3F3B-205ENST00000587171 MRS2Q9HD23 443 aa17.09■□□□□ 0.33
H3F3B-205ENST00000587171 ZNF277Q9NRM2 450 aaPredicted RBP17.09■□□□□ 0.33
H3F3B-205ENST00000587171 DDX60Q8IY21 1712 aaKnown RBP17.09■□□□□ 0.33
H3F3B-205ENST00000587171 APLP1P51693 650 aa17.08■□□□□ 0.32
H3F3B-205ENST00000587171 PSMD1Q99460 953 aa17.08■□□□□ 0.32
H3F3B-205ENST00000587171 TRMT112Q9UI30 125 aaKnown RBP17.08■□□□□ 0.32
H3F3B-205ENST00000587171 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
H3F3B-205ENST00000587171 ELL2O00472 640 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-205ENST00000587171 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
H3F3B-205ENST00000587171 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
H3F3B-205ENST00000587171 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
H3F3B-205ENST00000587171 TAF1P21675 1872 aa17.07■□□□□ 0.32
H3F3B-205ENST00000587171 SCN4AP35499 1836 aa17.07■□□□□ 0.32
H3F3B-205ENST00000587171 PPEF1O14829 653 aaPredicted RBP17.06■□□□□ 0.32
H3F3B-205ENST00000587171 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
H3F3B-205ENST00000587171 IARSP41252 1262 aaKnown RBP17.06■□□□□ 0.32
H3F3B-205ENST00000587171 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
H3F3B-205ENST00000587171 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
H3F3B-205ENST00000587171 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
H3F3B-205ENST00000587171 SMC1BQ8NDV3 1235 aa17.06■□□□□ 0.32
H3F3B-205ENST00000587171 ABCC4O15439 1325 aa17.05■□□□□ 0.32
H3F3B-205ENST00000587171 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
H3F3B-205ENST00000587171 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
H3F3B-205ENST00000587171 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
H3F3B-205ENST00000587171 SLC51AQ86UW1 340 aa17.04■□□□□ 0.32
H3F3B-205ENST00000587171 TSPYL6Q8N831 410 aa17.04■□□□□ 0.32
H3F3B-205ENST00000587171 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
H3F3B-205ENST00000587171 L3MBTL3Q96JM7 780 aaPredicted RBP17.04■□□□□ 0.32
H3F3B-205ENST00000587171 CHMP4AQ9BY43 222 aa17.04■□□□□ 0.32
H3F3B-205ENST00000587171 COL4A5P29400 1685 aa17.04■□□□□ 0.32
H3F3B-205ENST00000587171 IL16Q14005 1332 aa17.03■□□□□ 0.32
H3F3B-205ENST00000587171 ZNF541Q9H0D2 1346 aa17.03■□□□□ 0.32
H3F3B-205ENST00000587171 CACNA1FO60840 1977 aa17.03■□□□□ 0.32
H3F3B-205ENST00000587171 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
H3F3B-205ENST00000587171 FZD9O00144 591 aa17.03■□□□□ 0.32
H3F3B-205ENST00000587171 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
H3F3B-205ENST00000587171 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
H3F3B-205ENST00000587171 ATP6V0A2Q9Y487 856 aa17.03■□□□□ 0.32
H3F3B-205ENST00000587171 LRRC37AA6NMS7 1700 aa17.02■□□□□ 0.32
H3F3B-205ENST00000587171 RIC3Q7Z5B4 369 aa17.02■□□□□ 0.32
H3F3B-205ENST00000587171 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
H3F3B-205ENST00000587171 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
H3F3B-205ENST00000587171 BBOX1O75936 387 aa17.01■□□□□ 0.31
H3F3B-205ENST00000587171 FAM89AQ96GI7 184 aa17.01■□□□□ 0.31
H3F3B-205ENST00000587171 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
H3F3B-205ENST00000587171 GRAPQ13588 217 aa17■□□□□ 0.31
H3F3B-205ENST00000587171 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
H3F3B-205ENST00000587171 DNAJC5GQ8N7S2 189 aa17■□□□□ 0.31
H3F3B-205ENST00000587171 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
H3F3B-205ENST00000587171 JDP2Q8WYK2 163 aa17■□□□□ 0.31
H3F3B-205ENST00000587171 SF3B3Q15393 1217 aaKnown RBP16.99■□□□□ 0.31
H3F3B-205ENST00000587171 TMX4Q9H1E5 349 aaPredicted RBP16.99■□□□□ 0.31
H3F3B-205ENST00000587171 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
H3F3B-205ENST00000587171 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
H3F3B-205ENST00000587171 SP8Q8IXZ3 490 aa16.98■□□□□ 0.31
H3F3B-205ENST00000587171 GPC2Q8N158 579 aa16.98■□□□□ 0.31
H3F3B-205ENST00000587171 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
H3F3B-205ENST00000587171 MYD88Q99836 296 aa16.98■□□□□ 0.31
H3F3B-205ENST00000587171 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
H3F3B-205ENST00000587171 VPS33BQ9H267 617 aa16.98■□□□□ 0.31
H3F3B-205ENST00000587171 TAF1DQ9H5J8 278 aaPredicted RBP16.98■□□□□ 0.31
H3F3B-205ENST00000587171 COL4A1P02462 1669 aa16.97■□□□□ 0.31
H3F3B-205ENST00000587171 FANCIQ9NVI1 1328 aa16.97■□□□□ 0.31
H3F3B-205ENST00000587171 ADAMTSL1Q8N6G6 1762 aa16.97■□□□□ 0.31
H3F3B-205ENST00000587171 IRS4O14654 1257 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms