RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 HACL1Q9UJ83 578 aa15.38■□□□□ 0.05
LIG3-207ENST00000586119 NEFMP07197 916 aa15.37■□□□□ 0.05
LIG3-207ENST00000586119 EIF2S2P20042 333 aaKnown RBP15.37■□□□□ 0.05
LIG3-207ENST00000586119 FMR1Q06787 632 aaKnown RBP eCLIP15.37■□□□□ 0.05
LIG3-207ENST00000586119 PDIA6Q15084 440 aa15.37■□□□□ 0.05
LIG3-207ENST00000586119 PROSER3Q2NL68 480 aa15.37■□□□□ 0.05
LIG3-207ENST00000586119 KIF6Q6ZMV9 814 aa15.37■□□□□ 0.05
LIG3-207ENST00000586119 LRP10Q7Z4F1 713 aa15.37■□□□□ 0.05
LIG3-207ENST00000586119 NYXQ9GZU5 481 aa15.37■□□□□ 0.05
LIG3-207ENST00000586119 FOXN1O15353 648 aa15.36■□□□□ 0.05
LIG3-207ENST00000586119 NTSR2O95665 410 aa15.36■□□□□ 0.05
LIG3-207ENST00000586119 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
LIG3-207ENST00000586119 VEGFBP49765 207 aa15.36■□□□□ 0.05
LIG3-207ENST00000586119 ZNF428Q96B54 188 aa15.36■□□□□ 0.05
LIG3-207ENST00000586119 GJA3Q9Y6H8 435 aa15.36■□□□□ 0.05
LIG3-207ENST00000586119 CNTNAP1P78357 1384 aa15.36■□□□□ 0.05
LIG3-207ENST00000586119 LTBP1Q14766 1721 aa15.35■□□□□ 0.05
LIG3-207ENST00000586119 ADAMTSL1Q8N6G6 1762 aa15.35■□□□□ 0.05
LIG3-207ENST00000586119 GIGYF2Q6Y7W6 1299 aaKnown RBP15.35■□□□□ 0.05
LIG3-207ENST00000586119 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
LIG3-207ENST00000586119 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
LIG3-207ENST00000586119 RPGRQ92834 1020 aaKnown RBP15.35■□□□□ 0.05
LIG3-207ENST00000586119 PSMD1Q99460 953 aa15.35■□□□□ 0.05
LIG3-207ENST00000586119 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
LIG3-207ENST00000586119 TMEM88BA6NKF7 163 aa15.34■□□□□ 0.05
LIG3-207ENST00000586119 ZEB1P37275 1124 aaPredicted RBP15.34■□□□□ 0.05
LIG3-207ENST00000586119 EPS15P42566 896 aa15.34■□□□□ 0.05
LIG3-207ENST00000586119 RIPK4P57078 832 aa15.34■□□□□ 0.05
LIG3-207ENST00000586119 TAF1P21675 1872 aa15.33■□□□□ 0.05
LIG3-207ENST00000586119 KRT24Q2M2I5 525 aa15.33■□□□□ 0.04
LIG3-207ENST00000586119 GPC2Q8N158 579 aa15.33■□□□□ 0.04
LIG3-207ENST00000586119 JDP2Q8WYK2 163 aa15.33■□□□□ 0.04
LIG3-207ENST00000586119 RBM17Q96I25 401 aaKnown RBP15.33■□□□□ 0.04
LIG3-207ENST00000586119 MAPK8IP3Q9UPT6 1336 aa15.33■□□□□ 0.04
LIG3-207ENST00000586119 PPEF1O14829 653 aaPredicted RBP15.32■□□□□ 0.04
LIG3-207ENST00000586119 LARGE2Q8N3Y3 721 aa15.32■□□□□ 0.04
LIG3-207ENST00000586119 CRAMP1Q96RY5 1269 aa15.32■□□□□ 0.04
LIG3-207ENST00000586119 TMPOP42166 694 aaKnown RBP15.31■□□□□ 0.04
LIG3-207ENST00000586119 SCNN1DP51172 638 aa15.31■□□□□ 0.04
LIG3-207ENST00000586119 EIF6P56537 245 aaKnown RBP15.31■□□□□ 0.04
LIG3-207ENST00000586119 AIMP1Q12904 312 aaKnown RBP15.31■□□□□ 0.04
LIG3-207ENST00000586119 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
LIG3-207ENST00000586119 CCDC146Q8IYE0 955 aa15.31■□□□□ 0.04
LIG3-207ENST00000586119 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
LIG3-207ENST00000586119 NEUROD2Q15784 382 aa15.3■□□□□ 0.04
LIG3-207ENST00000586119 AOC3Q16853 763 aa15.3■□□□□ 0.04
LIG3-207ENST00000586119 DEFB115Q30KQ5 88 aa15.3■□□□□ 0.04
LIG3-207ENST00000586119 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
LIG3-207ENST00000586119 COPS6Q7L5N1 327 aa15.3■□□□□ 0.04
LIG3-207ENST00000586119 PPP1R42Q7Z4L9 355 aa15.3■□□□□ 0.04
LIG3-207ENST00000586119 PNMA8AQ86V59 439 aaPredicted RBP15.3■□□□□ 0.04
LIG3-207ENST00000586119 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
LIG3-207ENST00000586119 UTP14AQ9BVJ6 771 aaKnown RBP15.3■□□□□ 0.04
LIG3-207ENST00000586119 LAMB2P55268 1798 aa15.29■□□□□ 0.04
LIG3-207ENST00000586119 RIC1Q4ADV7 1423 aa15.29■□□□□ 0.04
LIG3-207ENST00000586119 IBTKQ9P2D0 1353 aaPredicted RBP15.29■□□□□ 0.04
LIG3-207ENST00000586119 ABCC4O15439 1325 aa15.29■□□□□ 0.04
LIG3-207ENST00000586119 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
LIG3-207ENST00000586119 XAGE3Q8WTP9 111 aa15.29■□□□□ 0.04
LIG3-207ENST00000586119 PNNQ9H307 717 aaKnown RBP15.29■□□□□ 0.04
LIG3-207ENST00000586119 TRAF5O00463 557 aa15.28■□□□□ 0.04
LIG3-207ENST00000586119 PPIP5K2O43314 1243 aa15.28■□□□□ 0.04
LIG3-207ENST00000586119 PARP10Q53GL7 1025 aa15.28■□□□□ 0.04
LIG3-207ENST00000586119 DDX21Q9NR30 783 aaKnown RBP eCLIP15.28■□□□□ 0.04
LIG3-207ENST00000586119 WBP1LQ9NX94 342 aa15.28■□□□□ 0.04
LIG3-207ENST00000586119 ATP6V0A2Q9Y487 856 aa15.28■□□□□ 0.04
LIG3-207ENST00000586119 LBX1P52954 281 aa15.27■□□□□ 0.04
LIG3-207ENST00000586119 CXCL9Q07325 125 aa15.27■□□□□ 0.04
LIG3-207ENST00000586119 NLRP10Q86W26 655 aa15.27■□□□□ 0.04
LIG3-207ENST00000586119 NIM1KQ8IY84 436 aa15.27■□□□□ 0.04
LIG3-207ENST00000586119 ABT1Q9ULW3 272 aaKnown RBP15.27■□□□□ 0.04
LIG3-207ENST00000586119 LAS1LQ9Y4W2 734 aaKnown RBP15.27■□□□□ 0.04
LIG3-207ENST00000586119 WDR33Q9C0J8 1336 aaKnown RBP15.26■□□□□ 0.03
LIG3-207ENST00000586119 RASSF10A6NK89 507 aa15.26■□□□□ 0.03
LIG3-207ENST00000586119 LMOD1P29536 600 aaPredicted RBP15.26■□□□□ 0.03
LIG3-207ENST00000586119 TCIRG1Q13488 830 aa15.26■□□□□ 0.03
LIG3-207ENST00000586119 CST9Q5W186 159 aa15.26■□□□□ 0.03
LIG3-207ENST00000586119 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
LIG3-207ENST00000586119 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
LIG3-207ENST00000586119 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
LIG3-207ENST00000586119 ANKRD36CQ5JPF3 1778 aa15.25■□□□□ 0.03
LIG3-207ENST00000586119 TRPM7Q96QT4 1865 aa15.25■□□□□ 0.03
LIG3-207ENST00000586119 CHL1O00533 1208 aa15.24■□□□□ 0.03
LIG3-207ENST00000586119 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
LIG3-207ENST00000586119 GRM1Q13255 1194 aa15.24■□□□□ 0.03
LIG3-207ENST00000586119 GRIPAP1Q4V328 841 aa15.24■□□□□ 0.03
LIG3-207ENST00000586119 CYP4F22Q6NT55 531 aa15.24■□□□□ 0.03
LIG3-207ENST00000586119 SP8Q8IXZ3 490 aa15.24■□□□□ 0.03
LIG3-207ENST00000586119 PRDM10Q9NQV6 1147 aa15.24■□□□□ 0.03
LIG3-207ENST00000586119 TRMT112Q9UI30 125 aaKnown RBP15.24■□□□□ 0.03
LIG3-207ENST00000586119 BBOX1O75936 387 aa15.23■□□□□ 0.03
LIG3-207ENST00000586119 RAD17O75943 681 aa15.23■□□□□ 0.03
LIG3-207ENST00000586119 HSPA8P11142 646 aaKnown RBP15.23■□□□□ 0.03
LIG3-207ENST00000586119 GMPSP49915 693 aaPredicted RBP15.23■□□□□ 0.03
LIG3-207ENST00000586119 HIRAP54198 1017 aaPredicted RBP15.23■□□□□ 0.03
LIG3-207ENST00000586119 RALBP1Q15311 655 aa15.23■□□□□ 0.03
LIG3-207ENST00000586119 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
LIG3-207ENST00000586119 USP50Q70EL3 339 aaPredicted RBP15.23■□□□□ 0.03
LIG3-207ENST00000586119 MPNDQ8N594 471 aa15.23■□□□□ 0.03
LIG3-207ENST00000586119 AIDAQ96BJ3 306 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms