RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 GPC2Q8N158 579 aa13.9□□□□□ -0.18
MBD3-203ENST00000585903 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
MBD3-203ENST00000585903 TSPYL4Q9UJ04 414 aa13.9□□□□□ -0.18
MBD3-203ENST00000585903 RRP7AQ9Y3A4 280 aaKnown RBP13.9□□□□□ -0.18
MBD3-203ENST00000585903 ABCC12Q96J65 1359 aa13.9□□□□□ -0.18
MBD3-203ENST00000585903 UBN2Q6ZU65 1347 aa13.9□□□□□ -0.19
MBD3-203ENST00000585903 PASKQ96RG2 1323 aa13.9□□□□□ -0.19
MBD3-203ENST00000585903 NTSR2O95665 410 aa13.89□□□□□ -0.19
MBD3-203ENST00000585903 RIPK4P57078 832 aa13.89□□□□□ -0.19
MBD3-203ENST00000585903 SLC10A5Q5PT55 438 aa13.89□□□□□ -0.19
MBD3-203ENST00000585903 TTLL7Q6ZT98 887 aa13.89□□□□□ -0.19
MBD3-203ENST00000585903 RPGRQ92834 1020 aaKnown RBP13.89□□□□□ -0.19
MBD3-203ENST00000585903 RBM17Q96I25 401 aaKnown RBP13.89□□□□□ -0.19
MBD3-203ENST00000585903 ZNF277Q9NRM2 450 aaPredicted RBP13.89□□□□□ -0.19
MBD3-203ENST00000585903 MKRN1Q9UHC7 482 aaKnown RBP13.89□□□□□ -0.19
MBD3-203ENST00000585903 HACL1Q9UJ83 578 aa13.89□□□□□ -0.19
MBD3-203ENST00000585903 MYBBP1AQ9BQG0 1328 aaKnown RBP13.89□□□□□ -0.19
MBD3-203ENST00000585903 CNTNAP1P78357 1384 aa13.88□□□□□ -0.19
MBD3-203ENST00000585903 HOXB7P09629 217 aa13.88□□□□□ -0.19
MBD3-203ENST00000585903 TMPOP42166 694 aaKnown RBP13.88□□□□□ -0.19
MBD3-203ENST00000585903 PDIA6Q15084 440 aa13.88□□□□□ -0.19
MBD3-203ENST00000585903 HSP90AB3PQ58FF7 597 aa13.88□□□□□ -0.19
MBD3-203ENST00000585903 SYNE4Q8N205 404 aa13.88□□□□□ -0.19
MBD3-203ENST00000585903 JDP2Q8WYK2 163 aa13.88□□□□□ -0.19
MBD3-203ENST00000585903 THUMPD2Q9BTF0 503 aaKnown RBP13.88□□□□□ -0.19
MBD3-203ENST00000585903 MYL6BP14649 208 aa13.87□□□□□ -0.19
MBD3-203ENST00000585903 FAM161AQ3B820 660 aa13.87□□□□□ -0.19
MBD3-203ENST00000585903 SUSD4Q5VX71 490 aa13.87□□□□□ -0.19
MBD3-203ENST00000585903 NUTM1Q86Y26 1132 aa13.87□□□□□ -0.19
MBD3-203ENST00000585903 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
MBD3-203ENST00000585903 ZNF541Q9H0D2 1346 aa13.87□□□□□ -0.19
MBD3-203ENST00000585903 FAM177BA6PVY3 158 aa13.86□□□□□ -0.19
MBD3-203ENST00000585903 CTCFP49711 727 aaPredicted RBP13.86□□□□□ -0.19
MBD3-203ENST00000585903 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
MBD3-203ENST00000585903 NLRP3Q96P20 1036 aa13.86□□□□□ -0.19
MBD3-203ENST00000585903 UTP14AQ9BVJ6 771 aaKnown RBP13.86□□□□□ -0.19
MBD3-203ENST00000585903 CHL1O00533 1208 aa13.85□□□□□ -0.19
MBD3-203ENST00000585903 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
MBD3-203ENST00000585903 GPTP24298 496 aa13.85□□□□□ -0.19
MBD3-203ENST00000585903 EPHX2P34913 555 aa13.85□□□□□ -0.19
MBD3-203ENST00000585903 EIF6P56537 245 aaKnown RBP13.85□□□□□ -0.19
MBD3-203ENST00000585903 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
MBD3-203ENST00000585903 DDX21Q9NR30 783 aaKnown RBP eCLIP13.85□□□□□ -0.19
MBD3-203ENST00000585903 LAMB2P55268 1798 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 PPEF1O14829 653 aaPredicted RBP13.84□□□□□ -0.19
MBD3-203ENST00000585903 BBOX1O75936 387 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 POTEJP0CG39 1038 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 OLFM4Q6UX06 510 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 TMC4Q7Z404 712 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 RUNDC1Q96C34 613 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 ABHD8Q96I13 439 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 RTFDC1Q9BY42 306 aaPredicted RBP13.84□□□□□ -0.19
MBD3-203ENST00000585903 ATP6V0A2Q9Y487 856 aa13.84□□□□□ -0.19
MBD3-203ENST00000585903 TMEM88BA6NKF7 163 aa13.83□□□□□ -0.2
MBD3-203ENST00000585903 AIDAQ96BJ3 306 aa13.83□□□□□ -0.2
MBD3-203ENST00000585903 WBP1LQ9NX94 342 aa13.83□□□□□ -0.2
MBD3-203ENST00000585903 CDHR2Q9BYE9 1310 aa13.83□□□□□ -0.2
MBD3-203ENST00000585903 COL4A5P29400 1685 aa13.82□□□□□ -0.2
MBD3-203ENST00000585903 EIF2S2P20042 333 aaKnown RBP13.82□□□□□ -0.2
MBD3-203ENST00000585903 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
MBD3-203ENST00000585903 LARGE2Q8N3Y3 721 aa13.82□□□□□ -0.2
MBD3-203ENST00000585903 LRRC37AA6NMS7 1700 aa13.81□□□□□ -0.2
MBD3-203ENST00000585903 LMOD1P29536 600 aaPredicted RBP13.81□□□□□ -0.2
MBD3-203ENST00000585903 VEGFBP49765 207 aa13.81□□□□□ -0.2
MBD3-203ENST00000585903 LBX1P52954 281 aa13.81□□□□□ -0.2
MBD3-203ENST00000585903 WDR43Q15061 677 aaKnown RBP eCLIP13.81□□□□□ -0.2
MBD3-203ENST00000585903 PROSER3Q2NL68 480 aa13.81□□□□□ -0.2
MBD3-203ENST00000585903 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
MBD3-203ENST00000585903 COPS6Q7L5N1 327 aa13.81□□□□□ -0.2
MBD3-203ENST00000585903 NLRP10Q86W26 655 aa13.81□□□□□ -0.2
MBD3-203ENST00000585903 SP8Q8IXZ3 490 aa13.81□□□□□ -0.2
MBD3-203ENST00000585903 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
MBD3-203ENST00000585903 TRPM7Q96QT4 1865 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 RASSF10A6NK89 507 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 ANP32CO43423 234 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 RGS19P49795 217 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 EAPPQ56P03 285 aaPredicted RBP13.8□□□□□ -0.2
MBD3-203ENST00000585903 NIM1KQ8IY84 436 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 CNTROBQ8N137 903 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 PLBD2Q8NHP8 589 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 CFAP44Q96MT7 982 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 CHMP4AQ9BY43 222 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 DBF4Q9UBU7 674 aaPredicted RBP13.8□□□□□ -0.2
MBD3-203ENST00000585903 TRIM35Q9UPQ4 493 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 LTBP1Q14766 1721 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 ABCC4O15439 1325 aa13.8□□□□□ -0.2
MBD3-203ENST00000585903 TNRC18O15417 2968 aaPredicted RBP13.79□□□□□ -0.2
MBD3-203ENST00000585903 SCNN1DP51172 638 aa13.79□□□□□ -0.2
MBD3-203ENST00000585903 TRIM28Q13263 835 aaKnown RBP13.79□□□□□ -0.2
MBD3-203ENST00000585903 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
MBD3-203ENST00000585903 XAGE3Q8WTP9 111 aa13.79□□□□□ -0.2
MBD3-203ENST00000585903 HYPKQ9NX55 129 aa13.79□□□□□ -0.2
MBD3-203ENST00000585903 THSD7BQ9C0I4 1608 aa13.79□□□□□ -0.2
MBD3-203ENST00000585903 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
MBD3-203ENST00000585903 PPIP5K2O43314 1243 aa13.78□□□□□ -0.2
MBD3-203ENST00000585903 HSPA8P11142 646 aaKnown RBP13.78□□□□□ -0.2
MBD3-203ENST00000585903 MLLT1Q03111 559 aaPredicted RBP13.78□□□□□ -0.2
MBD3-203ENST00000585903 CALD1Q05682 793 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms