RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 IBTKQ9P2D0 1353 aaPredicted RBP17.01■□□□□ 0.31
CHAF1A-202ENST00000585371 PTPRCP08575 1304 aa17■□□□□ 0.31
CHAF1A-202ENST00000585371 LAMB2P55268 1798 aa17■□□□□ 0.31
CHAF1A-202ENST00000585371 A0A0G2JLW4 131 aa17■□□□□ 0.31
CHAF1A-202ENST00000585371 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
CHAF1A-202ENST00000585371 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
CHAF1A-202ENST00000585371 TNRC6CQ9HCJ0 1690 aaKnown RBP17■□□□□ 0.31
CHAF1A-202ENST00000585371 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
CHAF1A-202ENST00000585371 NTSR2O95665 410 aa16.99■□□□□ 0.31
CHAF1A-202ENST00000585371 DPEP1P16444 411 aa16.99■□□□□ 0.31
CHAF1A-202ENST00000585371 HSPA6P17066 643 aa16.99■□□□□ 0.31
CHAF1A-202ENST00000585371 PRR5LQ6MZQ0 368 aa16.99■□□□□ 0.31
CHAF1A-202ENST00000585371 MYD88Q99836 296 aa16.99■□□□□ 0.31
CHAF1A-202ENST00000585371 DLEC1Q9Y238 1755 aa16.99■□□□□ 0.31
CHAF1A-202ENST00000585371 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
CHAF1A-202ENST00000585371 PARP10Q53GL7 1025 aa16.98■□□□□ 0.31
CHAF1A-202ENST00000585371 CWF19L2Q2TBE0 894 aaKnown RBP16.97■□□□□ 0.31
CHAF1A-202ENST00000585371 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
CHAF1A-202ENST00000585371 ARHGAP27Q6ZUM4 889 aa16.97■□□□□ 0.31
CHAF1A-202ENST00000585371 RCAN3Q9UKA8 241 aa16.97■□□□□ 0.31
CHAF1A-202ENST00000585371 TNNQ9UQP3 1299 aa16.97■□□□□ 0.31
CHAF1A-202ENST00000585371 ABCC12Q96J65 1359 aa16.97■□□□□ 0.31
CHAF1A-202ENST00000585371 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
CHAF1A-202ENST00000585371 NEURL1BA8MQ27 555 aa16.96■□□□□ 0.31
CHAF1A-202ENST00000585371 KIF3CO14782 793 aa16.96■□□□□ 0.31
CHAF1A-202ENST00000585371 CCDC24Q8N4L8 307 aa16.96■□□□□ 0.31
CHAF1A-202ENST00000585371 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.31
CHAF1A-202ENST00000585371 PIM2Q9P1W9 311 aa16.96■□□□□ 0.31
CHAF1A-202ENST00000585371 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
CHAF1A-202ENST00000585371 NBPF5PQ86XG9 351 aaPredicted RBP16.95■□□□□ 0.3
CHAF1A-202ENST00000585371 NUTM1Q86Y26 1132 aa16.95■□□□□ 0.3
CHAF1A-202ENST00000585371 SYNE4Q8N205 404 aa16.95■□□□□ 0.3
CHAF1A-202ENST00000585371 CCDC191Q8NCU4 936 aa16.95■□□□□ 0.3
CHAF1A-202ENST00000585371 LINS1Q8NG48 757 aa16.95■□□□□ 0.3
CHAF1A-202ENST00000585371 MYH3P11055 1940 aa16.95■□□□□ 0.3
CHAF1A-202ENST00000585371 RIC1Q4ADV7 1423 aa16.95■□□□□ 0.3
CHAF1A-202ENST00000585371 TRIM27P14373 513 aa16.94■□□□□ 0.3
CHAF1A-202ENST00000585371 KCNA3P22001 575 aa16.94■□□□□ 0.3
CHAF1A-202ENST00000585371 ERFEQ4G0M1 354 aa16.94■□□□□ 0.3
CHAF1A-202ENST00000585371 TPTE2Q6XPS3 522 aa16.94■□□□□ 0.3
CHAF1A-202ENST00000585371 PPP1R42Q7Z4L9 355 aa16.94■□□□□ 0.3
CHAF1A-202ENST00000585371 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
CHAF1A-202ENST00000585371 UTP14AQ9BVJ6 771 aaKnown RBP16.94■□□□□ 0.3
CHAF1A-202ENST00000585371 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
CHAF1A-202ENST00000585371 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
CHAF1A-202ENST00000585371 SLC10A5Q5PT55 438 aa16.93■□□□□ 0.3
CHAF1A-202ENST00000585371 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
CHAF1A-202ENST00000585371 NYXQ9GZU5 481 aa16.93■□□□□ 0.3
CHAF1A-202ENST00000585371 CWC25Q9NXE8 425 aaPredicted RBP16.93■□□□□ 0.3
CHAF1A-202ENST00000585371 ABCC4O15439 1325 aa16.93■□□□□ 0.3
CHAF1A-202ENST00000585371 RNF123Q5XPI4 1314 aa16.93■□□□□ 0.3
CHAF1A-202ENST00000585371 CASP7P55210 303 aa16.92■□□□□ 0.3
CHAF1A-202ENST00000585371 GCKRQ14397 625 aa16.92■□□□□ 0.3
CHAF1A-202ENST00000585371 ATF7IPQ6VMQ6 1270 aa16.92■□□□□ 0.3
CHAF1A-202ENST00000585371 TRMT112Q9UI30 125 aaKnown RBP16.92■□□□□ 0.3
CHAF1A-202ENST00000585371 CACNA1SQ13698 1873 aa16.92■□□□□ 0.3
CHAF1A-202ENST00000585371 TAF1P21675 1872 aa16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 KLRG2A4D1S0 409 aaPredicted RBP16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 H7C1W4 665 aa16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 ALDH1L1O75891 902 aa16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 TOMM70O94826 608 aa16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 PCCAP05165 728 aaPredicted RBP16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 SLC4A10Q6U841 1118 aa16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 JARID2Q92833 1246 aaPredicted RBP16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 FAM89AQ96GI7 184 aa16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 BRIP1Q9BX63 1249 aa16.91■□□□□ 0.3
CHAF1A-202ENST00000585371 IPO8O15397 1037 aaKnown RBP16.9■□□□□ 0.3
CHAF1A-202ENST00000585371 ST5P78524 1137 aa16.9■□□□□ 0.3
CHAF1A-202ENST00000585371 C9orf131Q5VYM1 1079 aa16.9■□□□□ 0.3
CHAF1A-202ENST00000585371 C3orf67Q6ZVT6 689 aa16.9■□□□□ 0.3
CHAF1A-202ENST00000585371 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
CHAF1A-202ENST00000585371 SH3TC1Q8TE82 1336 aa16.9■□□□□ 0.3
CHAF1A-202ENST00000585371 APLP1P51693 650 aa16.89■□□□□ 0.29
CHAF1A-202ENST00000585371 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
CHAF1A-202ENST00000585371 INTS3Q68E01 1043 aaKnown RBP16.89■□□□□ 0.29
CHAF1A-202ENST00000585371 UTYO14607 1347 aa16.89■□□□□ 0.29
CHAF1A-202ENST00000585371 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
CHAF1A-202ENST00000585371 SBF1O95248 1867 aa16.88■□□□□ 0.29
CHAF1A-202ENST00000585371 COL4A1P02462 1669 aa16.88■□□□□ 0.29
CHAF1A-202ENST00000585371 RLBP1P12271 317 aa16.88■□□□□ 0.29
CHAF1A-202ENST00000585371 HCLS1P14317 486 aaPredicted RBP16.88■□□□□ 0.29
CHAF1A-202ENST00000585371 CHRNA5P30532 468 aa16.88■□□□□ 0.29
CHAF1A-202ENST00000585371 CRY2Q49AN0 593 aa16.88■□□□□ 0.29
CHAF1A-202ENST00000585371 CEP350Q5VT06 3117 aa16.88■□□□□ 0.29
CHAF1A-202ENST00000585371 SLX4Q8IY92 1834 aa16.87■□□□□ 0.29
CHAF1A-202ENST00000585371 PLIN1O60240 522 aa16.87■□□□□ 0.29
CHAF1A-202ENST00000585371 GTF2E1P29083 439 aaPredicted RBP16.87■□□□□ 0.29
CHAF1A-202ENST00000585371 PDE6BP35913 854 aa16.87■□□□□ 0.29
CHAF1A-202ENST00000585371 CCT4P50991 539 aaKnown RBP16.87■□□□□ 0.29
CHAF1A-202ENST00000585371 CLUAP1Q96AJ1 413 aa16.87■□□□□ 0.29
CHAF1A-202ENST00000585371 NMRK2Q9NPI5 230 aa16.87■□□□□ 0.29
CHAF1A-202ENST00000585371 KDM2BQ8NHM5 1336 aa16.87■□□□□ 0.29
CHAF1A-202ENST00000585371 GRM8O00222 908 aa16.86■□□□□ 0.29
CHAF1A-202ENST00000585371 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
CHAF1A-202ENST00000585371 SRGNP10124 158 aa16.86■□□□□ 0.29
CHAF1A-202ENST00000585371 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
CHAF1A-202ENST00000585371 UBE3BQ7Z3V4 1068 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms