RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, human

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC3-210	ENST00000584997	CNTROB	Q8N137	903 aa		13.78	□□□□□ -0.2
CASC3-210	ENST00000584997	PRDM10	Q9NQV6	1147 aa		13.78	□□□□□ -0.2
CASC3-210	ENST00000584997	RRP7A	Q9Y3A4	280 aa	Known RBP	13.78	□□□□□ -0.2
CASC3-210	ENST00000584997	GJA3	Q9Y6H8	435 aa		13.78	□□□□□ -0.2
CASC3-210	ENST00000584997	MAP3K15	Q6ZN16	1313 aa		13.78	□□□□□ -0.2
CASC3-210	ENST00000584997	RIC1	Q4ADV7	1423 aa		13.77	□□□□□ -0.21
CASC3-210	ENST00000584997	SNED1	Q8TER0	1413 aa		13.77	□□□□□ -0.21
CASC3-210	ENST00000584997	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.76	□□□□□ -0.21
CASC3-210	ENST00000584997	MYL6B	P14649	208 aa		13.76	□□□□□ -0.21
CASC3-210	ENST00000584997	GPT	P24298	496 aa		13.76	□□□□□ -0.21
CASC3-210	ENST00000584997	DEFB115	Q30KQ5	88 aa		13.76	□□□□□ -0.21
CASC3-210	ENST00000584997	TTLL7	Q6ZT98	887 aa		13.76	□□□□□ -0.21
CASC3-210	ENST00000584997	LARGE2	Q8N3Y3	721 aa		13.76	□□□□□ -0.21
CASC3-210	ENST00000584997	ZBTB3	Q9H5J0	574 aa		13.76	□□□□□ -0.21
CASC3-210	ENST00000584997	ABT1	Q9ULW3	272 aa	Known RBP	13.76	□□□□□ -0.21
CASC3-210	ENST00000584997	UBN2	Q6ZU65	1347 aa		13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	RASSF10	A6NK89	507 aa		13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	PPEF1	O14829	653 aa	Predicted RBP	13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	LBX1	P52954	281 aa		13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	EIF4A1	P60842	406 aa	Known RBP	13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	GRIPAP1	Q4V328	841 aa		13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	RBM17	Q96I25	401 aa	Known RBP	13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	WBP1L	Q9NX94	342 aa		13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	COL4A5	P29400	1685 aa		13.75	□□□□□ -0.21
CASC3-210	ENST00000584997	TCERG1	O14776	1098 aa	Known RBP	13.74	□□□□□ -0.21
CASC3-210	ENST00000584997	HOXA10	P31260	410 aa	Predicted RBP	13.74	□□□□□ -0.21
CASC3-210	ENST00000584997	ZEB1	P37275	1124 aa	Predicted RBP	13.74	□□□□□ -0.21
CASC3-210	ENST00000584997	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.74	□□□□□ -0.21
CASC3-210	ENST00000584997	TMX4	Q9H1E5	349 aa	Predicted RBP	13.74	□□□□□ -0.21
CASC3-210	ENST00000584997	LTBP1	Q14766	1721 aa		13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	WDR33	Q9C0J8	1336 aa	Known RBP	13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	MAPK8IP3	Q9UPT6	1336 aa		13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	MAP2K1	Q02750	393 aa	Predicted RBP	13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	SUSD4	Q5VX71	490 aa		13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	PPP1R42	Q7Z4L9	355 aa		13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	NIM1K	Q8IY84	436 aa		13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	CRAMP1	Q96RY5	1269 aa		13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	THUMPD2	Q9BTF0	503 aa	Known RBP	13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	TRPM7	Q96QT4	1865 aa		13.73	□□□□□ -0.21
CASC3-210	ENST00000584997	NTSR2	O95665	410 aa		13.72	□□□□□ -0.21
CASC3-210	ENST00000584997	EPS15	P42566	896 aa		13.72	□□□□□ -0.21
CASC3-210	ENST00000584997	SCNN1D	P51172	638 aa		13.72	□□□□□ -0.21
CASC3-210	ENST00000584997	NFE2L2	Q16236	605 aa		13.72	□□□□□ -0.21
CASC3-210	ENST00000584997	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.72	□□□□□ -0.21
CASC3-210	ENST00000584997	ZNF34	Q8IZ26	560 aa		13.72	□□□□□ -0.21
CASC3-210	ENST00000584997	ERBB4	Q15303	1308 aa		13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	PPIP5K2	O43314	1243 aa		13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	HSPA8	P11142	646 aa	Known RBP	13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	GRM1	Q13255	1194 aa		13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	PARP10	Q53GL7	1025 aa		13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	USP50	Q70EL3	339 aa	Predicted RBP	13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	NLRP3	Q96P20	1036 aa		13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	PLEKHF1	Q96S99	279 aa		13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	BEGAIN	Q9BUH8	593 aa		13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	PNN	Q9H307	717 aa	Known RBP	13.71	□□□□□ -0.21
CASC3-210	ENST00000584997	ECE1	P42892	770 aa		13.7	□□□□□ -0.22
CASC3-210	ENST00000584997	C3orf67	Q6ZVT6	689 aa		13.7	□□□□□ -0.22
CASC3-210	ENST00000584997	SLC51A	Q86UW1	340 aa		13.7	□□□□□ -0.22
CASC3-210	ENST00000584997	CAPNS2	Q96L46	248 aa		13.7	□□□□□ -0.22
CASC3-210	ENST00000584997	TSPYL4	Q9UJ04	414 aa		13.7	□□□□□ -0.22
CASC3-210	ENST00000584997	THSD7B	Q9C0I4	1608 aa		13.69	□□□□□ -0.22
CASC3-210	ENST00000584997	FMR1	Q06787	632 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
CASC3-210	ENST00000584997	AOC3	Q16853	763 aa		13.69	□□□□□ -0.22
CASC3-210	ENST00000584997	UTP14A	Q9BVJ6	771 aa	Known RBP	13.69	□□□□□ -0.22
CASC3-210	ENST00000584997	ANKRD36C	Q5JPF3	1778 aa		13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	TRAF5	O00463	557 aa		13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	EIF2S2	P20042	333 aa	Known RBP	13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	SUPT20H	Q8NEM7	779 aa		13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	VPS33B	Q9H267	617 aa		13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	ADARB2	Q9NS39	739 aa	Known RBP	13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	GPRC5D	Q9NZD1	345 aa		13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	ATP6V0A2	Q9Y487	856 aa		13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	LAMB2	P55268	1798 aa		13.68	□□□□□ -0.22
CASC3-210	ENST00000584997	ABCC4	O15439	1325 aa		13.67	□□□□□ -0.22
CASC3-210	ENST00000584997	CYP4F22	Q6NT55	531 aa		13.67	□□□□□ -0.22
CASC3-210	ENST00000584997	ABHD8	Q96I13	439 aa		13.67	□□□□□ -0.22
CASC3-210	ENST00000584997	GPR101	Q96P66	508 aa	Predicted RBP	13.67	□□□□□ -0.22
CASC3-210	ENST00000584997	ANXA1	P04083	346 aa		13.66	□□□□□ -0.22
CASC3-210	ENST00000584997	CST9	Q5W186	159 aa		13.66	□□□□□ -0.22
CASC3-210	ENST00000584997	DPP8	Q6V1X1	898 aa	Predicted RBP	13.66	□□□□□ -0.22
CASC3-210	ENST00000584997	ZNRF3	Q9ULT6	936 aa		13.66	□□□□□ -0.22
CASC3-210	ENST00000584997	TLL2	Q9Y6L7	1015 aa		13.66	□□□□□ -0.22
CASC3-210	ENST00000584997	CXCL9	Q07325	125 aa		13.65	□□□□□ -0.22
CASC3-210	ENST00000584997	PROSER3	Q2NL68	480 aa		13.65	□□□□□ -0.22
CASC3-210	ENST00000584997	HSP90AB3P	Q58FF7	597 aa		13.65	□□□□□ -0.22
CASC3-210	ENST00000584997	SLC10A5	Q5PT55	438 aa		13.65	□□□□□ -0.22
CASC3-210	ENST00000584997	BCL2L13	Q9BXK5	485 aa		13.65	□□□□□ -0.22
CASC3-210	ENST00000584997	BBOX1	O75936	387 aa		13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	CELF2	O95319	508 aa	Known RBP	13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	HCLS1	P14317	486 aa	Predicted RBP	13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	GMPS	P49915	693 aa	Predicted RBP	13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	RIPK4	P57078	832 aa		13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	AIMP1	Q12904	312 aa	Known RBP	13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	PDIA6	Q15084	440 aa		13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	CIAPIN1	Q6FI81	312 aa		13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	DDX46	Q7L014	1031 aa	Known RBP	13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	LRP10	Q7Z4F1	713 aa		13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	MPND	Q8N594	471 aa		13.64	□□□□□ -0.23
CASC3-210	ENST00000584997	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms