RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 SYNE4Q8N205 404 aa26.68■■□□□ 1.86
TOP3A-219ENST00000584887 XAGE3Q8WTP9 111 aa26.68■■□□□ 1.86
TOP3A-219ENST00000584887 KLRG1Q96E93 195 aa26.68■■□□□ 1.86
TOP3A-219ENST00000584887 PRKRIP1Q9H875 184 aaPredicted RBP26.68■■□□□ 1.86
TOP3A-219ENST00000584887 TCERG1O14776 1098 aaKnown RBP26.67■■□□□ 1.86
TOP3A-219ENST00000584887 COPS6Q7L5N1 327 aa26.67■■□□□ 1.86
TOP3A-219ENST00000584887 RBM17Q96I25 401 aaKnown RBP26.67■■□□□ 1.86
TOP3A-219ENST00000584887 UTP14AQ9BVJ6 771 aaKnown RBP26.67■■□□□ 1.86
TOP3A-219ENST00000584887 ZNF541Q9H0D2 1346 aa26.66■■□□□ 1.86
TOP3A-219ENST00000584887 RIC1Q4ADV7 1423 aa26.66■■□□□ 1.86
TOP3A-219ENST00000584887 IARSP41252 1262 aaKnown RBP26.66■■□□□ 1.86
TOP3A-219ENST00000584887 C3orf67Q6ZVT6 689 aa26.66■■□□□ 1.86
TOP3A-219ENST00000584887 HOXA10P31260 410 aaPredicted RBP26.65■■□□□ 1.86
TOP3A-219ENST00000584887 IQCA1LA6NCM1 817 aa26.64■■□□□ 1.86
TOP3A-219ENST00000584887 NLRP3Q96P20 1036 aa26.64■■□□□ 1.86
TOP3A-219ENST00000584887 DDX21Q9NR30 783 aaKnown RBP eCLIP26.64■■□□□ 1.86
TOP3A-219ENST00000584887 CHPF2Q9P2E5 772 aa26.64■■□□□ 1.86
TOP3A-219ENST00000584887 PPEF1O14829 653 aaPredicted RBP26.63■■□□□ 1.85
TOP3A-219ENST00000584887 POTEIP0CG38 1075 aa26.63■■□□□ 1.85
TOP3A-219ENST00000584887 POTEJP0CG39 1038 aa26.63■■□□□ 1.85
TOP3A-219ENST00000584887 HSP90AB3PQ58FF7 597 aa26.63■■□□□ 1.85
TOP3A-219ENST00000584887 HDGFL1Q5TGJ6 251 aa26.63■■□□□ 1.85
TOP3A-219ENST00000584887 CC2D2BQ6DHV5 1058 aa26.63■■□□□ 1.85
TOP3A-219ENST00000584887 CHADLQ6NUI6 762 aa26.63■■□□□ 1.85
TOP3A-219ENST00000584887 CRAMP1Q96RY5 1269 aa26.63■■□□□ 1.85
TOP3A-219ENST00000584887 SLC51AQ86UW1 340 aa26.62■■□□□ 1.85
TOP3A-219ENST00000584887 PSMD1Q99460 953 aa26.62■■□□□ 1.85
TOP3A-219ENST00000584887 JDP2Q8WYK2 163 aa26.61■■□□□ 1.85
TOP3A-219ENST00000584887 ZNF428Q96B54 188 aa26.61■■□□□ 1.85
TOP3A-219ENST00000584887 L3MBTL3Q96JM7 780 aaPredicted RBP26.61■■□□□ 1.85
TOP3A-219ENST00000584887 EAPPQ56P03 285 aaPredicted RBP26.6■■□□□ 1.85
TOP3A-219ENST00000584887 NLRP10Q86W26 655 aa26.6■■□□□ 1.85
TOP3A-219ENST00000584887 TAF1DQ9H5J8 278 aaPredicted RBP26.6■■□□□ 1.85
TOP3A-219ENST00000584887 ANKRD36CQ5JPF3 1778 aa26.59■■□□□ 1.85
TOP3A-219ENST00000584887 SNED1Q8TER0 1413 aa26.59■■□□□ 1.85
TOP3A-219ENST00000584887 TMX4Q9H1E5 349 aaPredicted RBP26.59■■□□□ 1.85
TOP3A-219ENST00000584887 APAF1O14727 1248 aa26.58■■□□□ 1.85
TOP3A-219ENST00000584887 HCLS1P14317 486 aaPredicted RBP26.58■■□□□ 1.85
TOP3A-219ENST00000584887 TCIRG1Q13488 830 aa26.58■■□□□ 1.85
TOP3A-219ENST00000584887 IFFO2Q5TF58 517 aa26.58■■□□□ 1.85
TOP3A-219ENST00000584887 CFAP44Q96MT7 982 aa26.58■■□□□ 1.85
TOP3A-219ENST00000584887 TRMT112Q9UI30 125 aaKnown RBP26.58■■□□□ 1.85
TOP3A-219ENST00000584887 HACL1Q9UJ83 578 aa26.58■■□□□ 1.85
TOP3A-219ENST00000584887 FZD9O00144 591 aa26.57■■□□□ 1.84
TOP3A-219ENST00000584887 SLC10A5Q5PT55 438 aa26.57■■□□□ 1.84
TOP3A-219ENST00000584887 DUSP27Q5VZP5 1158 aa26.57■■□□□ 1.84
TOP3A-219ENST00000584887 LDHDQ86WU2 507 aa26.57■■□□□ 1.84
TOP3A-219ENST00000584887 LARGE2Q8N3Y3 721 aa26.57■■□□□ 1.84
TOP3A-219ENST00000584887 MBIPQ9NS73 344 aa26.57■■□□□ 1.84
TOP3A-219ENST00000584887 RNF123Q5XPI4 1314 aa26.57■■□□□ 1.84
TOP3A-219ENST00000584887 SCN4AP35499 1836 aa26.56■■□□□ 1.84
TOP3A-219ENST00000584887 HOXB7P09629 217 aa26.56■■□□□ 1.84
TOP3A-219ENST00000584887 EIF6P56537 245 aaKnown RBP26.56■■□□□ 1.84
TOP3A-219ENST00000584887 GRIPAP1Q4V328 841 aa26.56■■□□□ 1.84
TOP3A-219ENST00000584887 JMYQ8N9B5 988 aa26.56■■□□□ 1.84
TOP3A-219ENST00000584887 GJA3Q9Y6H8 435 aa26.56■■□□□ 1.84
TOP3A-219ENST00000584887 ABCC4O15439 1325 aa26.56■■□□□ 1.84
TOP3A-219ENST00000584887 DBF4Q9UBU7 674 aaPredicted RBP26.55■■□□□ 1.84
TOP3A-219ENST00000584887 CLEC11AQ9Y240 323 aa26.55■■□□□ 1.84
TOP3A-219ENST00000584887 SH3TC1Q8TE82 1336 aa26.55■■□□□ 1.84
TOP3A-219ENST00000584887 EPHX2P34913 555 aa26.54■■□□□ 1.84
TOP3A-219ENST00000584887 PLBD2Q8NHP8 589 aa26.54■■□□□ 1.84
TOP3A-219ENST00000584887 COL4A5P29400 1685 aa26.54■■□□□ 1.84
TOP3A-219ENST00000584887 NIM1KQ8IY84 436 aa26.53■■□□□ 1.84
TOP3A-219ENST00000584887 GPC2Q8N158 579 aa26.53■■□□□ 1.84
TOP3A-219ENST00000584887 ATP6V0A2Q9Y487 856 aa26.53■■□□□ 1.84
TOP3A-219ENST00000584887 PPIP5K2O43314 1243 aa26.52■■□□□ 1.84
TOP3A-219ENST00000584887 ANKRD13DQ6ZTN6 518 aa26.52■■□□□ 1.84
TOP3A-219ENST00000584887 ATP5J2-PTCD1G3V325 749 aa26.51■■□□□ 1.83
TOP3A-219ENST00000584887 CALD1Q05682 793 aaKnown RBP26.51■■□□□ 1.83
TOP3A-219ENST00000584887 DDX46Q7L014 1031 aaKnown RBP26.51■■□□□ 1.83
TOP3A-219ENST00000584887 HYPKQ9NX55 129 aa26.51■■□□□ 1.83
TOP3A-219ENST00000584887 LAMB2P55268 1798 aa26.51■■□□□ 1.83
TOP3A-219ENST00000584887 ELL2O00472 640 aaPredicted RBP26.5■■□□□ 1.83
TOP3A-219ENST00000584887 GNAI1P63096 354 aa26.5■■□□□ 1.83
TOP3A-219ENST00000584887 AOC3Q16853 763 aa26.5■■□□□ 1.83
TOP3A-219ENST00000584887 IFT57Q9NWB7 429 aa26.5■■□□□ 1.83
TOP3A-219ENST00000584887 LMOD1P29536 600 aaPredicted RBP26.49■■□□□ 1.83
TOP3A-219ENST00000584887 CREBZFQ9NS37 354 aa26.49■■□□□ 1.83
TOP3A-219ENST00000584887 BBOX1O75936 387 aa26.48■■□□□ 1.83
TOP3A-219ENST00000584887 ZNF853P0CG23 659 aa26.48■■□□□ 1.83
TOP3A-219ENST00000584887 DPP8Q6V1X1 898 aaPredicted RBP26.48■■□□□ 1.83
TOP3A-219ENST00000584887 PNMA8AQ86V59 439 aaPredicted RBP26.48■■□□□ 1.83
TOP3A-219ENST00000584887 MKRN1Q9UHC7 482 aaKnown RBP26.48■■□□□ 1.83
TOP3A-219ENST00000584887 GRAPQ13588 217 aa26.47■■□□□ 1.83
TOP3A-219ENST00000584887 RTL5Q5HYW3 569 aaPredicted RBP26.47■■□□□ 1.83
TOP3A-219ENST00000584887 SUPT20HQ8NEM7 779 aa26.47■■□□□ 1.83
TOP3A-219ENST00000584887 GRAPLQ8TC17 118 aaPredicted RBP26.47■■□□□ 1.83
TOP3A-219ENST00000584887 FAM89AQ96GI7 184 aa26.47■■□□□ 1.83
TOP3A-219ENST00000584887 ISCA1Q9BUE6 129 aa26.47■■□□□ 1.83
TOP3A-219ENST00000584887 GOLGA2Q08379 1002 aa26.46■■□□□ 1.83
TOP3A-219ENST00000584887 MPNDQ8N594 471 aa26.46■■□□□ 1.83
TOP3A-219ENST00000584887 MAP1SQ66K74 1059 aaPredicted RBP26.45■■□□□ 1.82
TOP3A-219ENST00000584887 RIC3Q7Z5B4 369 aa26.45■■□□□ 1.82
TOP3A-219ENST00000584887 SP8Q8IXZ3 490 aa26.45■■□□□ 1.82
TOP3A-219ENST00000584887 PASKQ96RG2 1323 aa26.44■■□□□ 1.82
TOP3A-219ENST00000584887 CCDC184Q52MB2 194 aa26.43■■□□□ 1.82
TOP3A-219ENST00000584887 TAF1P21675 1872 aa26.42■■□□□ 1.82
TOP3A-219ENST00000584887 ITGBL1O95965 494 aaPredicted RBP26.42■■□□□ 1.82
TOP3A-219ENST00000584887 HSPA1AP0DMV8 641 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms