RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 SUSD4Q5VX71 490 aa21.89■■□□□ 1.09
CCDC57-219ENST00000584717 SLC51AQ86UW1 340 aa21.89■■□□□ 1.09
CCDC57-219ENST00000584717 PSMD1Q99460 953 aa21.89■■□□□ 1.09
CCDC57-219ENST00000584717 IBTKQ9P2D0 1353 aaPredicted RBP21.88■■□□□ 1.09
CCDC57-219ENST00000584717 RIC1Q4ADV7 1423 aa21.88■■□□□ 1.09
CCDC57-219ENST00000584717 ITGBL1O95965 494 aaPredicted RBP21.87■■□□□ 1.09
CCDC57-219ENST00000584717 JDP2Q8WYK2 163 aa21.87■■□□□ 1.09
CCDC57-219ENST00000584717 TMEM88BA6NKF7 163 aa21.86■■□□□ 1.09
CCDC57-219ENST00000584717 TCERG1O14776 1098 aaKnown RBP21.86■■□□□ 1.09
CCDC57-219ENST00000584717 NTSR2O95665 410 aa21.86■■□□□ 1.09
CCDC57-219ENST00000584717 HOXA10P31260 410 aaPredicted RBP21.86■■□□□ 1.09
CCDC57-219ENST00000584717 ZNF34Q8IZ26 560 aa21.86■■□□□ 1.09
CCDC57-219ENST00000584717 GPC2Q8N158 579 aa21.86■■□□□ 1.09
CCDC57-219ENST00000584717 PNNQ9H307 717 aaKnown RBP21.86■■□□□ 1.09
CCDC57-219ENST00000584717 TSPYL4Q9UJ04 414 aa21.86■■□□□ 1.09
CCDC57-219ENST00000584717 GJA3Q9Y6H8 435 aa21.86■■□□□ 1.09
CCDC57-219ENST00000584717 MAP1SQ66K74 1059 aaPredicted RBP21.85■■□□□ 1.09
CCDC57-219ENST00000584717 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
CCDC57-219ENST00000584717 GIGYF2Q6Y7W6 1299 aaKnown RBP21.85■■□□□ 1.09
CCDC57-219ENST00000584717 C3orf67Q6ZVT6 689 aa21.85■■□□□ 1.09
CCDC57-219ENST00000584717 PNMA8AQ86V59 439 aaPredicted RBP21.85■■□□□ 1.09
CCDC57-219ENST00000584717 ERBB4Q15303 1308 aa21.84■■□□□ 1.09
CCDC57-219ENST00000584717 PPEF1O14829 653 aaPredicted RBP21.84■■□□□ 1.09
CCDC57-219ENST00000584717 EIF6P56537 245 aaKnown RBP21.84■■□□□ 1.09
CCDC57-219ENST00000584717 RBM17Q96I25 401 aaKnown RBP21.84■■□□□ 1.09
CCDC57-219ENST00000584717 FOXN1O15353 648 aa21.83■■□□□ 1.09
CCDC57-219ENST00000584717 EIF2S2P20042 333 aaKnown RBP21.83■■□□□ 1.09
CCDC57-219ENST00000584717 VEGFBP49765 207 aa21.83■■□□□ 1.09
CCDC57-219ENST00000584717 CNTROBQ8N137 903 aa21.83■■□□□ 1.09
CCDC57-219ENST00000584717 LARGE2Q8N3Y3 721 aa21.83■■□□□ 1.09
CCDC57-219ENST00000584717 CRAMP1Q96RY5 1269 aa21.83■■□□□ 1.09
CCDC57-219ENST00000584717 LTBP1Q14766 1721 aa21.83■■□□□ 1.08
CCDC57-219ENST00000584717 ANXA1P04083 346 aa21.82■■□□□ 1.08
CCDC57-219ENST00000584717 LRP10Q7Z4F1 713 aa21.82■■□□□ 1.08
CCDC57-219ENST00000584717 PPP1R42Q7Z4L9 355 aa21.82■■□□□ 1.08
CCDC57-219ENST00000584717 RIPK4P57078 832 aa21.81■■□□□ 1.08
CCDC57-219ENST00000584717 PDIA6Q15084 440 aa21.81■■□□□ 1.08
CCDC57-219ENST00000584717 PROSER3Q2NL68 480 aa21.81■■□□□ 1.08
CCDC57-219ENST00000584717 PARP10Q53GL7 1025 aa21.81■■□□□ 1.08
CCDC57-219ENST00000584717 LMOD1P29536 600 aaPredicted RBP21.8■■□□□ 1.08
CCDC57-219ENST00000584717 GRIPAP1Q4V328 841 aa21.79■■□□□ 1.08
CCDC57-219ENST00000584717 NECTIN2Q92692 538 aa21.79■■□□□ 1.08
CCDC57-219ENST00000584717 NLRP3Q96P20 1036 aa21.79■■□□□ 1.08
CCDC57-219ENST00000584717 UTP14AQ9BVJ6 771 aaKnown RBP21.79■■□□□ 1.08
CCDC57-219ENST00000584717 ANKRD36CQ5JPF3 1778 aa21.79■■□□□ 1.08
CCDC57-219ENST00000584717 EPS15P42566 896 aa21.78■■□□□ 1.08
CCDC57-219ENST00000584717 SCNN1DP51172 638 aa21.78■■□□□ 1.08
CCDC57-219ENST00000584717 LAMB2P55268 1798 aa21.77■■□□□ 1.08
CCDC57-219ENST00000584717 PPIP5K2O43314 1243 aa21.77■■□□□ 1.08
CCDC57-219ENST00000584717 AOC3Q16853 763 aa21.77■■□□□ 1.08
CCDC57-219ENST00000584717 NIM1KQ8IY84 436 aa21.77■■□□□ 1.08
CCDC57-219ENST00000584717 AIDAQ96BJ3 306 aa21.77■■□□□ 1.08
CCDC57-219ENST00000584717 ABCC4O15439 1325 aa21.77■■□□□ 1.07
CCDC57-219ENST00000584717 RASSF10A6NK89 507 aa21.76■■□□□ 1.07
CCDC57-219ENST00000584717 TMPOP42166 694 aaKnown RBP21.76■■□□□ 1.07
CCDC57-219ENST00000584717 AIMP1Q12904 312 aaKnown RBP21.76■■□□□ 1.07
CCDC57-219ENST00000584717 TMX4Q9H1E5 349 aaPredicted RBP21.76■■□□□ 1.07
CCDC57-219ENST00000584717 ABT1Q9ULW3 272 aaKnown RBP21.76■■□□□ 1.07
CCDC57-219ENST00000584717 ATP6V0A2Q9Y487 856 aa21.76■■□□□ 1.07
CCDC57-219ENST00000584717 FMR1Q06787 632 aaKnown RBP eCLIP21.75■■□□□ 1.07
CCDC57-219ENST00000584717 DEFB115Q30KQ5 88 aa21.75■■□□□ 1.07
CCDC57-219ENST00000584717 SLC10A5Q5PT55 438 aa21.75■■□□□ 1.07
CCDC57-219ENST00000584717 COPS6Q7L5N1 327 aa21.75■■□□□ 1.07
CCDC57-219ENST00000584717 DDX21Q9NR30 783 aaKnown RBP eCLIP21.75■■□□□ 1.07
CCDC57-219ENST00000584717 HCLS1P14317 486 aaPredicted RBP21.74■■□□□ 1.07
CCDC57-219ENST00000584717 CTCFP49711 727 aaPredicted RBP21.74■■□□□ 1.07
CCDC57-219ENST00000584717 LMOD3Q0VAK6 560 aa21.74■■□□□ 1.07
CCDC57-219ENST00000584717 XAGE3Q8WTP9 111 aa21.74■■□□□ 1.07
CCDC57-219ENST00000584717 BABAM1Q9NWV8 329 aa21.74■■□□□ 1.07
CCDC57-219ENST00000584717 RALBP1Q15311 655 aa21.73■■□□□ 1.07
CCDC57-219ENST00000584717 NLRP10Q86W26 655 aa21.73■■□□□ 1.07
CCDC57-219ENST00000584717 CCDC146Q8IYE0 955 aa21.73■■□□□ 1.07
CCDC57-219ENST00000584717 PRDM10Q9NQV6 1147 aa21.73■■□□□ 1.07
CCDC57-219ENST00000584717 WBP1LQ9NX94 342 aa21.73■■□□□ 1.07
CCDC57-219ENST00000584717 NEUROD2Q15784 382 aa21.72■■□□□ 1.07
CCDC57-219ENST00000584717 KRT24Q2M2I5 525 aa21.72■■□□□ 1.07
CCDC57-219ENST00000584717 HSP90AB3PQ58FF7 597 aa21.72■■□□□ 1.07
CCDC57-219ENST00000584717 ZNF428Q96B54 188 aa21.72■■□□□ 1.07
CCDC57-219ENST00000584717 USP50Q70EL3 339 aaPredicted RBP21.71■■□□□ 1.07
CCDC57-219ENST00000584717 WDR33Q9C0J8 1336 aaKnown RBP21.71■■□□□ 1.07
CCDC57-219ENST00000584717 TRAF5O00463 557 aa21.7■■□□□ 1.06
CCDC57-219ENST00000584717 LBX1P52954 281 aa21.7■■□□□ 1.06
CCDC57-219ENST00000584717 DPP8Q6V1X1 898 aaPredicted RBP21.7■■□□□ 1.06
CCDC57-219ENST00000584717 SUPT20HQ8NEM7 779 aa21.7■■□□□ 1.06
CCDC57-219ENST00000584717 TRMT112Q9UI30 125 aaKnown RBP21.7■■□□□ 1.06
CCDC57-219ENST00000584717 ZNRF3Q9ULT6 936 aa21.7■■□□□ 1.06
CCDC57-219ENST00000584717 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
CCDC57-219ENST00000584717 TAF1P21675 1872 aa21.69■■□□□ 1.06
CCDC57-219ENST00000584717 TRPM7Q96QT4 1865 aa21.69■■□□□ 1.06
CCDC57-219ENST00000584717 CXCL9Q07325 125 aa21.69■■□□□ 1.06
CCDC57-219ENST00000584717 TCIRG1Q13488 830 aa21.69■■□□□ 1.06
CCDC57-219ENST00000584717 PAXIP1Q6ZW49 1069 aaPredicted RBP21.69■■□□□ 1.06
CCDC57-219ENST00000584717 DDX46Q7L014 1031 aaKnown RBP21.69■■□□□ 1.06
CCDC57-219ENST00000584717 RTFDC1Q9BY42 306 aaPredicted RBP21.69■■□□□ 1.06
CCDC57-219ENST00000584717 VPS33BQ9H267 617 aa21.69■■□□□ 1.06
CCDC57-219ENST00000584717 ADARB2Q9NS39 739 aaKnown RBP21.69■■□□□ 1.06
CCDC57-219ENST00000584717 GPRC5DQ9NZD1 345 aa21.69■■□□□ 1.06
CCDC57-219ENST00000584717 BBOX1O75936 387 aa21.68■■□□□ 1.06
CCDC57-219ENST00000584717 SP8Q8IXZ3 490 aa21.68■■□□□ 1.06
CCDC57-219ENST00000584717 MPNDQ8N594 471 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms