RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 KIF6Q6ZMV9 814 aa11.28□□□□□ -0.6
SRSF1-207ENST00000584668 TLL2Q9Y6L7 1015 aa11.28□□□□□ -0.6
SRSF1-207ENST00000584668 LTBP1Q14766 1721 aa11.28□□□□□ -0.6
SRSF1-207ENST00000584668 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
SRSF1-207ENST00000584668 NEFMP07197 916 aa11.27□□□□□ -0.61
SRSF1-207ENST00000584668 RGS19P49795 217 aa11.27□□□□□ -0.61
SRSF1-207ENST00000584668 CRY2Q49AN0 593 aa11.27□□□□□ -0.61
SRSF1-207ENST00000584668 CYP4F22Q6NT55 531 aa11.27□□□□□ -0.61
SRSF1-207ENST00000584668 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.61
SRSF1-207ENST00000584668 ADARB2Q9NS39 739 aaKnown RBP11.27□□□□□ -0.61
SRSF1-207ENST00000584668 USP16Q9Y5T5 823 aa11.27□□□□□ -0.61
SRSF1-207ENST00000584668 PRKAR2BP31323 418 aa11.26□□□□□ -0.61
SRSF1-207ENST00000584668 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
SRSF1-207ENST00000584668 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
SRSF1-207ENST00000584668 SUPT20HQ8NEM7 779 aa11.26□□□□□ -0.61
SRSF1-207ENST00000584668 HHIPL1Q96JK4 782 aa11.26□□□□□ -0.61
SRSF1-207ENST00000584668 VPS33BQ9H267 617 aa11.26□□□□□ -0.61
SRSF1-207ENST00000584668 KIF7Q2M1P5 1343 aa11.26□□□□□ -0.61
SRSF1-207ENST00000584668 CDHR2Q9BYE9 1310 aa11.26□□□□□ -0.61
SRSF1-207ENST00000584668 PPEF1O14829 653 aaPredicted RBP11.25□□□□□ -0.61
SRSF1-207ENST00000584668 PPIP5K2O43314 1243 aa11.25□□□□□ -0.61
SRSF1-207ENST00000584668 SCNN1DP51172 638 aa11.25□□□□□ -0.61
SRSF1-207ENST00000584668 OLFM4Q6UX06 510 aa11.25□□□□□ -0.61
SRSF1-207ENST00000584668 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
SRSF1-207ENST00000584668 SNED1Q8TER0 1413 aa11.25□□□□□ -0.61
SRSF1-207ENST00000584668 ERVV-1B6SEH8 477 aa11.24□□□□□ -0.61
SRSF1-207ENST00000584668 HTATSF1O43719 755 aaKnown RBP11.24□□□□□ -0.61
SRSF1-207ENST00000584668 CELF2O95319 508 aaKnown RBP11.24□□□□□ -0.61
SRSF1-207ENST00000584668 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
SRSF1-207ENST00000584668 ABCC12Q96J65 1359 aa11.24□□□□□ -0.61
SRSF1-207ENST00000584668 CASP8AP2Q9UKL3 1982 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 KCNQ3O43525 872 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 HOXA10P31260 410 aaPredicted RBP11.23□□□□□ -0.61
SRSF1-207ENST00000584668 EPS15P42566 896 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 NOGQ13253 232 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 PPP1R42Q7Z4L9 355 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 SAPCD2Q86UD0 394 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 GPRC5DQ9NZD1 345 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
SRSF1-207ENST00000584668 COL4A5P29400 1685 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 DGKZQ13574 1117 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 TNIP1Q15025 636 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 MCM10Q7L590 875 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 NUTM1Q86Y26 1132 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 ZC3H15Q8WU90 426 aaKnown RBP11.22□□□□□ -0.61
SRSF1-207ENST00000584668 NLRP3Q96P20 1036 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 BCL2L13Q9BXK5 485 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 MCOLN1Q9GZU1 580 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 ZNF408Q9H9D4 720 aa11.22□□□□□ -0.61
SRSF1-207ENST00000584668 AKAP11Q9UKA4 1901 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 PRAMEF22A3QJZ6 481 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 TRAF5O00463 557 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 AOC2O75106 756 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
SRSF1-207ENST00000584668 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.611e-7■■■□□ 16.1
SRSF1-207ENST00000584668 TAF7Q15545 349 aaPredicted RBP11.21□□□□□ -0.61
SRSF1-207ENST00000584668 HLFQ16534 295 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 PARP10Q53GL7 1025 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 CST9Q5W186 159 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
SRSF1-207ENST00000584668 CDC37L1Q7L3B6 337 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 NBPF15Q8N660 670 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 ZNRF3Q9ULT6 936 aa11.21□□□□□ -0.61
SRSF1-207ENST00000584668 PDE4DIPQ5VU43 2346 aa11.21□□□□□ -0.62
SRSF1-207ENST00000584668 ANKRD36CQ5JPF3 1778 aa11.21□□□□□ -0.62
SRSF1-207ENST00000584668 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.62
SRSF1-207ENST00000584668 DLG5Q8TDM6 1919 aa11.2□□□□□ -0.62
SRSF1-207ENST00000584668 PER1O15534 1290 aaPredicted RBP11.2□□□□□ -0.62
SRSF1-207ENST00000584668 CNGB1Q14028 1251 aaPredicted RBP11.2□□□□□ -0.62
SRSF1-207ENST00000584668 AOC3Q16853 763 aa11.2□□□□□ -0.62
SRSF1-207ENST00000584668 DPP8Q6V1X1 898 aaPredicted RBP11.2□□□□□ -0.62
SRSF1-207ENST00000584668 NGEFQ8N5V2 710 aa11.2□□□□□ -0.62
SRSF1-207ENST00000584668 PHACTR3Q96KR7 559 aa11.2□□□□□ -0.62
SRSF1-207ENST00000584668 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
SRSF1-207ENST00000584668 H7C1D1 291 aa11.19□□□□□ -0.62
SRSF1-207ENST00000584668 TCERG1O14776 1098 aaKnown RBP11.19□□□□□ -0.62
SRSF1-207ENST00000584668 GPTP24298 496 aa11.19□□□□□ -0.62
SRSF1-207ENST00000584668 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
SRSF1-207ENST00000584668 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
SRSF1-207ENST00000584668 ATP6V0A2Q9Y487 856 aa11.19□□□□□ -0.62
SRSF1-207ENST00000584668 TNRC18O15417 2968 aaPredicted RBP11.18□□□□□ -0.62
SRSF1-207ENST00000584668 GMPSP49915 693 aaPredicted RBP11.18□□□□□ -0.62
SRSF1-207ENST00000584668 TMC4Q7Z404 712 aa11.18□□□□□ -0.62
SRSF1-207ENST00000584668 CCER1Q8TC90 406 aaPredicted RBP11.18□□□□□ -0.62
SRSF1-207ENST00000584668 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
SRSF1-207ENST00000584668 ZBTB3Q9H5J0 574 aa11.18□□□□□ -0.62
SRSF1-207ENST00000584668 LAMB2P55268 1798 aa11.18□□□□□ -0.62
SRSF1-207ENST00000584668 UBN2Q6ZU65 1347 aa11.17□□□□□ -0.62
SRSF1-207ENST00000584668 BBOX1O75936 387 aa11.17□□□□□ -0.62
SRSF1-207ENST00000584668 MYL6BP14649 208 aa11.17□□□□□ -0.62
SRSF1-207ENST00000584668 HUNKP57058 714 aa11.17□□□□□ -0.62
SRSF1-207ENST00000584668 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
SRSF1-207ENST00000584668 HSP90AB3PQ58FF7 597 aa11.17□□□□□ -0.62
SRSF1-207ENST00000584668 MPNDQ8N594 471 aa11.17□□□□□ -0.62
SRSF1-207ENST00000584668 CCDC102AQ96A19 550 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms