RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-210	ENST00000584340	RIC3	Q7Z5B4	369 aa		13.77	□□□□□ -0.21
PSMD11-210	ENST00000584340	NUTM1	Q86Y26	1132 aa		13.77	□□□□□ -0.21
PSMD11-210	ENST00000584340	BRIP1	Q9BX63	1249 aa		13.77	□□□□□ -0.21
PSMD11-210	ENST00000584340	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.77	□□□□□ -0.21
PSMD11-210	ENST00000584340		A0A0G2JLW4	131 aa		13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	NEURL1B	A8MQ27	555 aa		13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	CHRNA5	P30532	468 aa		13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	CWF19L2	Q2TBE0	894 aa	Known RBP	13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	CRY2	Q49AN0	593 aa		13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	HSP90AB3P	Q58FF7	597 aa		13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	TPTE2	Q6XPS3	522 aa		13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	DNAAF4	Q8WXU2	420 aa		13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	MYD88	Q99836	296 aa		13.76	□□□□□ -0.21
PSMD11-210	ENST00000584340	FKBP5	Q13451	457 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD11-210	ENST00000584340	CNBD1	Q8NA66	436 aa		13.75	□□□□□ -0.21
PSMD11-210	ENST00000584340	CCDC191	Q8NCU4	936 aa		13.75	□□□□□ -0.21
PSMD11-210	ENST00000584340	TNN	Q9UQP3	1299 aa		13.75	□□□□□ -0.21
PSMD11-210	ENST00000584340	PTPRC	P08575	1304 aa		13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340	FAM177B	A6PVY3	158 aa		13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340		H7C1W4	665 aa		13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340	DDX58	O95786	925 aa	Known RBP	13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340	SRGN	P10124	158 aa		13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340	YBX3	P16989	372 aa	Known RBP eCLIP	13.74	□□□□□ -0.21	6e-6	■■■□□ 14.9
PSMD11-210	ENST00000584340	UTP14A	Q9BVJ6	771 aa	Known RBP	13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340	NOB1	Q9ULX3	412 aa	Known RBP	13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340	TAF1	P21675	1872 aa		13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340	SLX4	Q8IY92	1834 aa		13.74	□□□□□ -0.21
PSMD11-210	ENST00000584340	RNF123	Q5XPI4	1314 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	GCKR	Q14397	625 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	PPP1R42	Q7Z4L9	355 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	LINS1	Q8NG48	757 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	ARHGAP45	Q92619	1136 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	FAM89A	Q96GI7	184 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	NYX	Q9GZU5	481 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	SMC4	Q9NTJ3	1288 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	ARFGEF1	Q9Y6D6	1849 aa		13.73	□□□□□ -0.21
PSMD11-210	ENST00000584340	PCCA	P05165	728 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD11-210	ENST00000584340	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD11-210	ENST00000584340	C7orf43	Q8WVR3	580 aa		13.72	□□□□□ -0.21
PSMD11-210	ENST00000584340	JARID2	Q92833	1246 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD11-210	ENST00000584340	SNED1	Q8TER0	1413 aa		13.72	□□□□□ -0.21
PSMD11-210	ENST00000584340	UTY	O14607	1347 aa		13.71	□□□□□ -0.21
PSMD11-210	ENST00000584340	HCLS1	P14317	486 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD11-210	ENST00000584340	HOXA10	P31260	410 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD11-210	ENST00000584340	SLC51A	Q86UW1	340 aa		13.71	□□□□□ -0.21
PSMD11-210	ENST00000584340	KAZALD1	Q96I82	304 aa		13.71	□□□□□ -0.21
PSMD11-210	ENST00000584340	CWC25	Q9NXE8	425 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD11-210	ENST00000584340	TRMT112	Q9UI30	125 aa	Known RBP	13.71	□□□□□ -0.21
PSMD11-210	ENST00000584340	SH3TC1	Q8TE82	1336 aa		13.7	□□□□□ -0.22
PSMD11-210	ENST00000584340	CDHR2	Q9BYE9	1310 aa		13.7	□□□□□ -0.22
PSMD11-210	ENST00000584340	TRIM27	P14373	513 aa		13.7	□□□□□ -0.22
PSMD11-210	ENST00000584340	PDE6B	P35913	854 aa		13.7	□□□□□ -0.22
PSMD11-210	ENST00000584340	SF3B3	Q15393	1217 aa	Known RBP	13.7	□□□□□ -0.22
PSMD11-210	ENST00000584340	C2CD5	Q86YS7	1000 aa		13.7	□□□□□ -0.22
PSMD11-210	ENST00000584340	KLHL34	Q8N239	644 aa		13.7	□□□□□ -0.22
PSMD11-210	ENST00000584340	ABCC4	O15439	1325 aa		13.69	□□□□□ -0.22
PSMD11-210	ENST00000584340	ST5	P78524	1137 aa		13.69	□□□□□ -0.22
PSMD11-210	ENST00000584340	STYK1	Q6J9G0	422 aa		13.69	□□□□□ -0.22
PSMD11-210	ENST00000584340	PLA2G12B	Q9BX93	195 aa		13.69	□□□□□ -0.22
PSMD11-210	ENST00000584340	USP44	Q9H0E7	712 aa		13.69	□□□□□ -0.22
PSMD11-210	ENST00000584340	MYH3	P11055	1940 aa		13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	CACNA1S	Q13698	1873 aa		13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340		H0YIN7	160 aa		13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	IRS4	O14654	1257 aa	Predicted RBP	13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	ALDH1L1	O75891	902 aa		13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	RTL5	Q5HYW3	569 aa	Predicted RBP	13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	EPHA10	Q5JZY3	1008 aa		13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	INTS3	Q68E01	1043 aa	Known RBP	13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	YTHDC1	Q96MU7	727 aa	Known RBP	13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	PIM2	Q9P1W9	311 aa		13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	PDZRN3	Q9UPQ7	1066 aa		13.68	□□□□□ -0.22
PSMD11-210	ENST00000584340	CSF1R	P07333	972 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	RLBP1	P12271	317 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	NPR1	P16066	1061 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	PRELP	P51888	382 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	FOXO4	P98177	505 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	ATF7IP	Q6VMQ6	1270 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	MASTL	Q96GX5	879 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	WWC3	Q9ULE0	1092 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	FER1L6	Q2WGJ9	1857 aa		13.67	□□□□□ -0.22
PSMD11-210	ENST00000584340	KIF16B	Q96L93	1317 aa		13.66	□□□□□ -0.22
PSMD11-210	ENST00000584340	NEXN	Q0ZGT2	675 aa		13.66	□□□□□ -0.22
PSMD11-210	ENST00000584340	UBE3B	Q7Z3V4	1068 aa		13.66	□□□□□ -0.22
PSMD11-210	ENST00000584340	TTLL11	Q8NHH1	800 aa		13.66	□□□□□ -0.22
PSMD11-210	ENST00000584340	CRAMP1	Q96RY5	1269 aa		13.66	□□□□□ -0.22
PSMD11-210	ENST00000584340	SRCIN1	Q9C0H9	1055 aa		13.66	□□□□□ -0.22
PSMD11-210	ENST00000584340	SBF1	O95248	1867 aa		13.65	□□□□□ -0.22
PSMD11-210	ENST00000584340	GRM8	O00222	908 aa		13.65	□□□□□ -0.22
PSMD11-210	ENST00000584340	SLC4A10	Q6U841	1118 aa		13.65	□□□□□ -0.22
PSMD11-210	ENST00000584340	OLFM4	Q6UX06	510 aa		13.65	□□□□□ -0.22
PSMD11-210	ENST00000584340	TTLL6	Q8N841	843 aa		13.65	□□□□□ -0.22
PSMD11-210	ENST00000584340	NLRP3	Q96P20	1036 aa		13.65	□□□□□ -0.22
PSMD11-210	ENST00000584340	API5	Q9BZZ5	524 aa	Known RBP	13.65	□□□□□ -0.22
PSMD11-210	ENST00000584340	RCAN3	Q9UKA8	241 aa		13.65	□□□□□ -0.22
PSMD11-210	ENST00000584340	LRRC37A	A6NMS7	1700 aa		13.64	□□□□□ -0.23
PSMD11-210	ENST00000584340	PDE8A	O60658	829 aa		13.64	□□□□□ -0.23
PSMD11-210	ENST00000584340	GTF2E1	P29083	439 aa	Predicted RBP	13.64	□□□□□ -0.23
PSMD11-210	ENST00000584340	DALRD3	Q5D0E6	543 aa	Known RBP	13.64	□□□□□ -0.23

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