RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 TCF3P15923 654 aa9.35□□□□□ -0.91
TTC39C-208ENST00000584095 GRNP28799 593 aaKnown RBP9.35□□□□□ -0.91
TTC39C-208ENST00000584095 ATP2B2Q01814 1243 aa9.35□□□□□ -0.91
TTC39C-208ENST00000584095 TYRO3Q06418 890 aa9.35□□□□□ -0.91
TTC39C-208ENST00000584095 TRIP4Q15650 581 aaPredicted RBP9.35□□□□□ -0.91
TTC39C-208ENST00000584095 FAM161BQ96MY7 647 aa9.35□□□□□ -0.91
TTC39C-208ENST00000584095 CSRNP1Q96S65 589 aa9.35□□□□□ -0.91
TTC39C-208ENST00000584095 CFHR5Q9BXR6 569 aa9.35□□□□□ -0.91
TTC39C-208ENST00000584095 GPAMQ9HCL2 828 aa9.35□□□□□ -0.91
TTC39C-208ENST00000584095 NEUROD4Q9HD90 331 aa9.35□□□□□ -0.91
TTC39C-208ENST00000584095 RTCBQ9Y3I0 505 aaKnown RBP9.35□□□□□ -0.91
TTC39C-208ENST00000584095 FGD1P98174 961 aa9.34□□□□□ -0.91
TTC39C-208ENST00000584095 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
TTC39C-208ENST00000584095 CRIPAKQ8N1N5 446 aa9.34□□□□□ -0.91
TTC39C-208ENST00000584095 CRISPLD1Q9H336 500 aa9.34□□□□□ -0.91
TTC39C-208ENST00000584095 RUBCNLQ9H714 662 aa9.34□□□□□ -0.91
TTC39C-208ENST00000584095 KCNMB2Q9Y691 235 aa9.34□□□□□ -0.91
TTC39C-208ENST00000584095 AXIN1O15169 862 aa9.33□□□□□ -0.92
TTC39C-208ENST00000584095 TSNAXIP1Q2TAA8 658 aa9.33□□□□□ -0.92
TTC39C-208ENST00000584095 TTC16Q8NEE8 873 aa9.33□□□□□ -0.92
TTC39C-208ENST00000584095 BCL11AQ9H165 835 aa9.33□□□□□ -0.92
TTC39C-208ENST00000584095 DYRK1BQ9Y463 629 aa9.33□□□□□ -0.92
TTC39C-208ENST00000584095 NRG2O14511 850 aaPredicted RBP9.32□□□□□ -0.92
TTC39C-208ENST00000584095 EIF1AYO14602 144 aaKnown RBP9.32□□□□□ -0.92
TTC39C-208ENST00000584095 DAB2P98082 770 aa9.32□□□□□ -0.92
TTC39C-208ENST00000584095 XPCQ01831 940 aaPredicted RBP9.32□□□□□ -0.92
TTC39C-208ENST00000584095 ALG1LQ6GMV1 187 aa9.32□□□□□ -0.92
TTC39C-208ENST00000584095 TMC4Q7Z404 712 aa9.32□□□□□ -0.92
TTC39C-208ENST00000584095 CMTR1Q8N1G2 835 aaKnown RBP9.32□□□□□ -0.92
TTC39C-208ENST00000584095 FOXD3Q9UJU5 478 aaPredicted RBP9.32□□□□□ -0.92
TTC39C-208ENST00000584095 SENP3-EIF4A1A0A087X0R7 540 aa9.31□□□□□ -0.92
TTC39C-208ENST00000584095 GFRA3O60609 400 aa9.31□□□□□ -0.92
TTC39C-208ENST00000584095 F11P03951 625 aa9.31□□□□□ -0.92
TTC39C-208ENST00000584095 LDLRAD1Q5T700 205 aa9.31□□□□□ -0.92
TTC39C-208ENST00000584095 BACH2Q9BYV9 841 aa9.31□□□□□ -0.92
TTC39C-208ENST00000584095 GJA3Q9Y6H8 435 aa9.31□□□□□ -0.92
TTC39C-208ENST00000584095 UBAP1LF5GYI3 381 aa9.3□□□□□ -0.92
TTC39C-208ENST00000584095 TNFRSF21O75509 655 aa9.3□□□□□ -0.92
TTC39C-208ENST00000584095 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.3□□□□□ -0.92
TTC39C-208ENST00000584095 XKR5Q6UX68 686 aa9.3□□□□□ -0.92
TTC39C-208ENST00000584095 FBF1Q8TES7 1133 aa9.3□□□□□ -0.92
TTC39C-208ENST00000584095 CEP63Q96MT8 703 aa9.3□□□□□ -0.92
TTC39C-208ENST00000584095 GAS2L1Q99501 681 aaPredicted RBP9.3□□□□□ -0.92
TTC39C-208ENST00000584095 DNAJC25Q9H1X3 360 aa9.3□□□□□ -0.92
TTC39C-208ENST00000584095 FNDC3AQ9Y2H6 1198 aaKnown RBP9.3□□□□□ -0.92
TTC39C-208ENST00000584095 NEFLP07196 543 aa9.29□□□□□ -0.92
TTC39C-208ENST00000584095 PSMD2Q13200 908 aa9.29□□□□□ -0.92
TTC39C-208ENST00000584095 PDE12Q6L8Q7 609 aaKnown RBP9.29□□□□□ -0.92
TTC39C-208ENST00000584095 ZNF438Q7Z4V0 828 aa9.29□□□□□ -0.92
TTC39C-208ENST00000584095 NLRP8Q86W28 1048 aa9.29□□□□□ -0.92
TTC39C-208ENST00000584095 ATP13A2Q9NQ11 1180 aa9.29□□□□□ -0.92
TTC39C-208ENST00000584095 SOBPA7XYQ1 873 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 ST8SIA5O15466 376 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 SORBS3O60504 671 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 CPNE3O75131 537 aaKnown RBP9.28□□□□□ -0.92
TTC39C-208ENST00000584095 THBS1P07996 1170 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 EPB42P16452 691 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 GNA15P30679 374 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 SAMD5Q5TGI4 173 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 PGBD3Q8N328 593 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 ELP3Q9H9T3 547 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 MRS2Q9HD23 443 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 BRD7Q9NPI1 651 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 TMEM63CQ9P1W3 806 aa9.28□□□□□ -0.92
TTC39C-208ENST00000584095 MAN1A2O60476 641 aa9.27□□□□□ -0.93
TTC39C-208ENST00000584095 ZCCHC2Q9C0B9 1178 aaKnown RBP9.27□□□□□ -0.93
TTC39C-208ENST00000584095 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
TTC39C-208ENST00000584095 VTI1BQ9UEU0 232 aa9.27□□□□□ -0.93
TTC39C-208ENST00000584095 XYLBO75191 536 aa9.26□□□□□ -0.93
TTC39C-208ENST00000584095 EGFRP00533 1210 aa9.25□□□□□ -0.93
TTC39C-208ENST00000584095 EFHC2Q5JST6 749 aa9.25□□□□□ -0.93
TTC39C-208ENST00000584095 CHRDQ9H2X0 955 aa9.25□□□□□ -0.93
TTC39C-208ENST00000584095 ZFYVE28Q9HCC9 887 aa9.25□□□□□ -0.93
TTC39C-208ENST00000584095 DACH1Q9UI36 760 aa9.25□□□□□ -0.93
TTC39C-208ENST00000584095 IGSF3O75054 1194 aa9.24□□□□□ -0.93
TTC39C-208ENST00000584095 PHACTR2O75167 634 aa9.24□□□□□ -0.93
TTC39C-208ENST00000584095 IRS1P35568 1242 aa9.24□□□□□ -0.93
TTC39C-208ENST00000584095 KCNQ4P56696 695 aa9.24□□□□□ -0.93
TTC39C-208ENST00000584095 PTSQ03393 145 aa9.24□□□□□ -0.93
TTC39C-208ENST00000584095 UBAP2LQ14157 1087 aaKnown RBP9.24□□□□□ -0.93
TTC39C-208ENST00000584095 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
TTC39C-208ENST00000584095 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.24□□□□□ -0.93
TTC39C-208ENST00000584095 PI16Q6UXB8 463 aa9.24□□□□□ -0.93
TTC39C-208ENST00000584095 CCDC74AQ96AQ1 378 aa9.24□□□□□ -0.93
TTC39C-208ENST00000584095 SLC35F4A4IF30 521 aa9.23□□□□□ -0.93
TTC39C-208ENST00000584095 SCAMP3O14828 347 aaKnown RBP9.23□□□□□ -0.93
TTC39C-208ENST00000584095 EFSO43281 561 aa9.23□□□□□ -0.93
TTC39C-208ENST00000584095 FAM157BP0CG42 384 aa9.23□□□□□ -0.93
TTC39C-208ENST00000584095 ITGAEP38570 1179 aa9.23□□□□□ -0.93
TTC39C-208ENST00000584095 HDLBPQ00341 1268 aaKnown RBP9.23□□□□□ -0.93
TTC39C-208ENST00000584095 SFSWAPQ12872 951 aaKnown RBP9.23□□□□□ -0.93
TTC39C-208ENST00000584095 RIPOR1Q6ZS17 1223 aa9.23□□□□□ -0.93
TTC39C-208ENST00000584095 NLRP13Q86W25 1043 aa9.23□□□□□ -0.93
TTC39C-208ENST00000584095 EPS8L3Q8TE67 593 aaKnown RBP9.23□□□□□ -0.93
TTC39C-208ENST00000584095 CNTN3Q9P232 1028 aa9.23□□□□□ -0.93
TTC39C-208ENST00000584095 AK5Q9Y6K8 562 aa9.23□□□□□ -0.93
TTC39C-208ENST00000584095 ATXN7O15265 892 aaPredicted RBP9.22□□□□□ -0.93
TTC39C-208ENST00000584095 POLR3DP05423 398 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms