RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 DGKGP49619 791 aa7.55□□□□□ -1.2
PPP4R1-227ENST00000583988 NEUROD1Q13562 356 aa7.55□□□□□ -1.2
PPP4R1-227ENST00000583988 HIF1AQ16665 826 aa7.55□□□□□ -1.2
PPP4R1-227ENST00000583988 RTN1Q16799 776 aa7.55□□□□□ -1.2
PPP4R1-227ENST00000583988 PLA2G4EQ3MJ16 856 aa7.55□□□□□ -1.2
PPP4R1-227ENST00000583988 VTI1AQ96AJ9 217 aa7.55□□□□□ -1.2
PPP4R1-227ENST00000583988 SUV39H2Q9H5I1 410 aa7.55□□□□□ -1.2
PPP4R1-227ENST00000583988 KCNH4Q9UQ05 1017 aa7.55□□□□□ -1.2
PPP4R1-227ENST00000583988 ELOA3CA0A087WX78 387 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-227ENST00000583988 ELOA3DA6NLF2 546 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-227ENST00000583988 GNB5O14775 395 aa7.54□□□□□ -1.2
PPP4R1-227ENST00000583988 FAM69CQ0P6D2 419 aa7.54□□□□□ -1.2
PPP4R1-227ENST00000583988 ELOA3BQ3SY89 546 aa7.54□□□□□ -1.2
PPP4R1-227ENST00000583988 ELOA3Q8NG57 546 aa7.54□□□□□ -1.2
PPP4R1-227ENST00000583988 KLK14Q9P0G3 267 aa7.54□□□□□ -1.2
PPP4R1-227ENST00000583988 PIK3R2O00459 728 aa7.53□□□□□ -1.2
PPP4R1-227ENST00000583988 SIN3BO75182 1162 aa7.53□□□□□ -1.2
PPP4R1-227ENST00000583988 COL8A1P27658 744 aa7.53□□□□□ -1.2
PPP4R1-227ENST00000583988 WEE1P30291 646 aa7.53□□□□□ -1.2
PPP4R1-227ENST00000583988 TMEM164Q5U3C3 297 aa7.53□□□□□ -1.2
PPP4R1-227ENST00000583988 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
PPP4R1-227ENST00000583988 STK32AQ8WU08 396 aa7.53□□□□□ -1.2
PPP4R1-227ENST00000583988 BHMTQ93088 406 aa7.53□□□□□ -1.2
PPP4R1-227ENST00000583988 IGHA1P01876 353 aa7.52□□□□□ -1.21
PPP4R1-227ENST00000583988 KCNQ4P56696 695 aa7.52□□□□□ -1.21
PPP4R1-227ENST00000583988 TBC1D8BQ0IIM8 1120 aa7.52□□□□□ -1.21
PPP4R1-227ENST00000583988 DGKZQ13574 1117 aa7.52□□□□□ -1.21
PPP4R1-227ENST00000583988 SWI5Q1ZZU3 235 aa7.52□□□□□ -1.21
PPP4R1-227ENST00000583988 PRIMPOLQ96LW4 560 aa7.52□□□□□ -1.21
PPP4R1-227ENST00000583988 IGFLR1Q9H665 355 aa7.52□□□□□ -1.21
PPP4R1-227ENST00000583988 BCS1LQ9Y276 419 aa7.52□□□□□ -1.21
PPP4R1-227ENST00000583988 KRBA1A5PL33 1030 aa7.51□□□□□ -1.21
PPP4R1-227ENST00000583988 TGFBR3LH3BV60 316 aa7.51□□□□□ -1.21
PPP4R1-227ENST00000583988 FOXO3O43524 673 aa7.51□□□□□ -1.21
PPP4R1-227ENST00000583988 PRMT3O60678 531 aa7.51□□□□□ -1.21
PPP4R1-227ENST00000583988 QTRT2Q9H974 415 aaKnown RBP7.51□□□□□ -1.21
PPP4R1-227ENST00000583988 TMEM88BA6NKF7 163 aa7.5□□□□□ -1.21
PPP4R1-227ENST00000583988 MSTNO14793 375 aa7.5□□□□□ -1.21
PPP4R1-227ENST00000583988 TNFRSF25Q93038 417 aa7.5□□□□□ -1.21
PPP4R1-227ENST00000583988 PNMA5Q96PV4 448 aa7.5□□□□□ -1.21
PPP4R1-227ENST00000583988 NOP53Q9NZM5 478 aaKnown RBP7.5□□□□□ -1.21
PPP4R1-227ENST00000583988 ADARB2-AS1A8MUL3 147 aa7.49□□□□□ -1.21
PPP4R1-227ENST00000583988 ITGB2P05107 769 aa7.49□□□□□ -1.21
PPP4R1-227ENST00000583988 ADH7P40394 386 aa7.49□□□□□ -1.21
PPP4R1-227ENST00000583988 IER5Q5VY09 327 aa7.49□□□□□ -1.21
PPP4R1-227ENST00000583988 CLP1Q92989 425 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-227ENST00000583988 SPOCK3Q9BQ16 436 aa7.49□□□□□ -1.21
PPP4R1-227ENST00000583988 UBE2OQ9C0C9 1292 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-227ENST00000583988 DMGDHQ9UI17 866 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-227ENST00000583988 M0R082 166 aa7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 IDH3AP50213 366 aa7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 FKBP5Q13451 457 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 ALYREFQ86V81 257 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 ZNF417Q8TAU3 575 aa7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 ZNF587Q96SQ5 575 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 MDFIQ99750 246 aa7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 PLVAPQ9BX97 442 aa7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.48□□□□□ -1.21
PPP4R1-227ENST00000583988 EPB42P16452 691 aa7.47□□□□□ -1.21
PPP4R1-227ENST00000583988 NFKB1P19838 968 aa7.47□□□□□ -1.21
PPP4R1-227ENST00000583988 C11orf91Q3C1V1 193 aa7.47□□□□□ -1.21
PPP4R1-227ENST00000583988 C8orf86Q6ZUL3 223 aa7.47□□□□□ -1.21
PPP4R1-227ENST00000583988 TRIM11Q96F44 468 aa7.47□□□□□ -1.21
PPP4R1-227ENST00000583988 GSX2Q9BZM3 304 aa7.47□□□□□ -1.21
PPP4R1-227ENST00000583988 USTQ9Y2C2 406 aa7.47□□□□□ -1.21
PPP4R1-227ENST00000583988 STARD13Q9Y3M8 1113 aa7.47□□□□□ -1.21
PPP4R1-227ENST00000583988 MICAL2O94851 1124 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 ALBP02768 609 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 INPP5BP32019 993 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 CCINQ13939 588 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 OCLNQ16625 522 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 KRT25Q7Z3Z0 450 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 IFT43Q96FT9 208 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 MKNK1Q9BUB5 465 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 SLAIN2Q9P270 581 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 LRFN2Q9ULH4 789 aa7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-227ENST00000583988 PROCP04070 461 aa7.45□□□□□ -1.22
PPP4R1-227ENST00000583988 ARSDP51689 593 aa7.45□□□□□ -1.22
PPP4R1-227ENST00000583988 SUZ12Q15022 739 aaKnown RBP7.45□□□□□ -1.22
PPP4R1-227ENST00000583988 MICALL1Q8N3F8 863 aa7.45□□□□□ -1.22
PPP4R1-227ENST00000583988 RETREG2Q8NC44 543 aa7.45□□□□□ -1.22
PPP4R1-227ENST00000583988 MYO19Q96H55 970 aa7.45□□□□□ -1.22
PPP4R1-227ENST00000583988 USP20Q9Y2K6 914 aa7.45□□□□□ -1.22
PPP4R1-227ENST00000583988 CARNS1A5YM72 827 aa7.44□□□□□ -1.22
PPP4R1-227ENST00000583988 GRNP28799 593 aaKnown RBP7.44□□□□□ -1.22
PPP4R1-227ENST00000583988 COX20Q5RI15 118 aa7.44□□□□□ -1.22
PPP4R1-227ENST00000583988 SLC6A14Q9UN76 642 aa7.44□□□□□ -1.22
PPP4R1-227ENST00000583988 C1QTNF9BB2RNN3 333 aa7.43□□□□□ -1.22
PPP4R1-227ENST00000583988 NUDT8Q8WV74 236 aa7.43□□□□□ -1.22
PPP4R1-227ENST00000583988 SAP130Q9H0E3 1048 aa7.43□□□□□ -1.22
PPP4R1-227ENST00000583988 EFCC1Q9HA90 598 aa7.43□□□□□ -1.22
PPP4R1-227ENST00000583988 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
PPP4R1-227ENST00000583988 CXXC1Q9P0U4 656 aaPredicted RBP7.43□□□□□ -1.22
PPP4R1-227ENST00000583988 SPDYE3A6NKU9 549 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 LILRB5O75023 590 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 SASH3O75995 380 aa7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 TARSP26639 723 aaKnown RBP7.42□□□□□ -1.22
PPP4R1-227ENST00000583988 SSFA2P28290 1259 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms