RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ADCY9O60503 1353 aa11.14□□□□□ -0.63
PPP4R1-225ENST00000583438 SENP3-EIF4A1A0A087X0R7 540 aa11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 CYP27B1O15528 508 aa11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 SKIV2LQ15477 1246 aaKnown RBP11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 NUTM1Q86Y26 1132 aa11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 PUS7Q96PZ0 661 aaKnown RBP11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 CARD14Q9BXL6 1004 aa11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 POLR3EQ9NVU0 708 aa11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
PPP4R1-225ENST00000583438 CFHP08603 1231 aa11.12□□□□□ -0.63
PPP4R1-225ENST00000583438 GPR162Q16538 588 aa11.12□□□□□ -0.63
PPP4R1-225ENST00000583438 HSP90AB2PQ58FF8 381 aa11.12□□□□□ -0.63
PPP4R1-225ENST00000583438 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
PPP4R1-225ENST00000583438 TFCP2L1Q9NZI6 479 aa11.12□□□□□ -0.63
PPP4R1-225ENST00000583438 TONSLQ96HA7 1378 aa11.12□□□□□ -0.63
PPP4R1-225ENST00000583438 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
PPP4R1-225ENST00000583438 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
PPP4R1-225ENST00000583438 KDM4AO75164 1064 aa11.11□□□□□ -0.63
PPP4R1-225ENST00000583438 SLC16A10Q8TF71 515 aa11.11□□□□□ -0.63
PPP4R1-225ENST00000583438 COG3Q96JB2 828 aa11.11□□□□□ -0.63
PPP4R1-225ENST00000583438 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
PPP4R1-225ENST00000583438 INSRP06213 1382 aa11.11□□□□□ -0.63
PPP4R1-225ENST00000583438 PALLDQ8WX93 1383 aa11.11□□□□□ -0.63
PPP4R1-225ENST00000583438 TJP1Q07157 1748 aa11.1□□□□□ -0.63
PPP4R1-225ENST00000583438 MOXD2PA6NHM9 499 aa11.1□□□□□ -0.63
PPP4R1-225ENST00000583438 AMPHP49418 695 aa11.1□□□□□ -0.63
PPP4R1-225ENST00000583438 DIXDC1Q155Q3 683 aa11.1□□□□□ -0.63
PPP4R1-225ENST00000583438 PROCA1Q8NCQ7 364 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-225ENST00000583438 PCMTD1Q96MG8 357 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-225ENST00000583438 EMILIN1Q9Y6C2 1016 aa11.1□□□□□ -0.63
PPP4R1-225ENST00000583438 USP47Q96K76 1375 aa11.1□□□□□ -0.63
PPP4R1-225ENST00000583438 ZNF831Q5JPB2 1677 aa11.09□□□□□ -0.63
PPP4R1-225ENST00000583438 NDUFV2P19404 249 aa11.09□□□□□ -0.63
PPP4R1-225ENST00000583438 LIMD1Q9UGP4 676 aa11.09□□□□□ -0.63
PPP4R1-225ENST00000583438 WWC3Q9ULE0 1092 aa11.09□□□□□ -0.63
PPP4R1-225ENST00000583438 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
PPP4R1-225ENST00000583438 FLT4P35916 1363 aa11.08□□□□□ -0.64
PPP4R1-225ENST00000583438 CLK2P49760 499 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-225ENST00000583438 RIC3Q7Z5B4 369 aa11.08□□□□□ -0.64
PPP4R1-225ENST00000583438 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-225ENST00000583438 TSR3Q9UJK0 312 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-225ENST00000583438 HOXA2O43364 376 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 POLD1P28340 1107 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 PPP4CP60510 307 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 FUT2Q10981 343 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 RSBN1LQ6PCB5 846 aaPredicted RBP11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 THSD4Q6ZMP0 1018 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 LINC00116Q8NCU8 138 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 PIGBQ92521 554 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 HLA-CQ95604 372 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
PPP4R1-225ENST00000583438 KDRP35968 1356 aa11.06□□□□□ -0.64
PPP4R1-225ENST00000583438 SPTLC1O15269 473 aa11.06□□□□□ -0.64
PPP4R1-225ENST00000583438 GIGYF1O75420 1035 aaPredicted RBP11.06□□□□□ -0.64
PPP4R1-225ENST00000583438 USP46P62068 366 aa11.06□□□□□ -0.64
PPP4R1-225ENST00000583438 ITPK1Q13572 414 aa11.06□□□□□ -0.64
PPP4R1-225ENST00000583438 SBF1O95248 1867 aa11.06□□□□□ -0.64
PPP4R1-225ENST00000583438 PCDH11XQ9BZA7 1347 aa11.06□□□□□ -0.64
PPP4R1-225ENST00000583438 PCDH11YQ9BZA8 1340 aa11.06□□□□□ -0.64
PPP4R1-225ENST00000583438 APLP1P51693 650 aa11.05□□□□□ -0.64
PPP4R1-225ENST00000583438 KMT5BQ4FZB7 885 aa11.05□□□□□ -0.64
PPP4R1-225ENST00000583438 MPRIPQ6WCQ1 1025 aa11.05□□□□□ -0.64
PPP4R1-225ENST00000583438 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
PPP4R1-225ENST00000583438 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
PPP4R1-225ENST00000583438 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
PPP4R1-225ENST00000583438 SCN11AQ9UI33 1791 aa11.05□□□□□ -0.64
PPP4R1-225ENST00000583438 PXDNLA1KZ92 1463 aa11.05□□□□□ -0.64
PPP4R1-225ENST00000583438 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-225ENST00000583438 GUCA2AQ02747 115 aa11.04□□□□□ -0.64
PPP4R1-225ENST00000583438 NECTIN2Q92692 538 aa11.04□□□□□ -0.64
PPP4R1-225ENST00000583438 KDM6AO15550 1401 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 AFDNP55196 1824 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 ACTN4O43707 911 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 TATP17735 454 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 RAPGEF4Q8WZA2 1011 aa11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 ASAP1Q9ULH1 1129 aa11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 PCDHB15Q9Y5E8 787 aa11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 CGNL1Q0VF96 1302 aa11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 IGSF1Q8N6C5 1336 aa11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 KIF24Q5T7B8 1368 aa11.03□□□□□ -0.64
PPP4R1-225ENST00000583438 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
PPP4R1-225ENST00000583438 PCDHGC3Q9UN70 934 aa11.02□□□□□ -0.65
PPP4R1-225ENST00000583438 GJA5P36382 358 aa11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 TUSC1Q2TAM9 212 aa11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 PUS10Q3MIT2 529 aaKnown RBP11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 ZNF526Q8TF50 670 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 CD2APQ9Y5K6 639 aa11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 CCDC88AQ3V6T2 1871 aa11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 WDR90Q96KV7 1748 aa11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
PPP4R1-225ENST00000583438 DLEC1Q9Y238 1755 aa11□□□□□ -0.65
PPP4R1-225ENST00000583438 LOC102724428A0A0B4J2F2 783 aa11□□□□□ -0.65
PPP4R1-225ENST00000583438 FDX1P10109 184 aa11□□□□□ -0.65
PPP4R1-225ENST00000583438 SIK1P57059 783 aa11□□□□□ -0.65
PPP4R1-225ENST00000583438 ATG3Q9NT62 314 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms