RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 EPHX2P34913 555 aa12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PNMA8AQ86V59 439 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 JDP2Q8WYK2 163 aa12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PSMD1Q99460 953 aa12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 IBTKQ9P2D0 1353 aaPredicted RBP12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 RIC1Q4ADV7 1423 aa12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
CDK5RAP3-227ENST00000583352 GPTP24298 496 aa12.75□□□□□ -0.37
CDK5RAP3-227ENST00000583352 HOXA10P31260 410 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CNTNAP1P78357 1384 aa12.75□□□□□ -0.37
CDK5RAP3-227ENST00000583352 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
CDK5RAP3-227ENST00000583352 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
CDK5RAP3-227ENST00000583352 RNF123Q5XPI4 1314 aa12.75□□□□□ -0.37
CDK5RAP3-227ENST00000583352 GPC2Q8N158 579 aa12.75□□□□□ -0.37
CDK5RAP3-227ENST00000583352 SNED1Q8TER0 1413 aa12.74□□□□□ -0.37
CDK5RAP3-227ENST00000583352 UBN2Q6ZU65 1347 aa12.74□□□□□ -0.37
CDK5RAP3-227ENST00000583352 ITGBL1O95965 494 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-227ENST00000583352 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-227ENST00000583352 SUSD4Q5VX71 490 aa12.74□□□□□ -0.37
CDK5RAP3-227ENST00000583352 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-227ENST00000583352 GIGYF2Q6Y7W6 1299 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PPP1R42Q7Z4L9 355 aa12.73□□□□□ -0.37
CDK5RAP3-227ENST00000583352 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CRAMP1Q96RY5 1269 aa12.73□□□□□ -0.37
CDK5RAP3-227ENST00000583352 TSPYL4Q9UJ04 414 aa12.73□□□□□ -0.37
CDK5RAP3-227ENST00000583352 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 NTSR2O95665 410 aa12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PARP10Q53GL7 1025 aa12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 LARGE2Q8N3Y3 721 aa12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 TMX4Q9H1E5 349 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
CDK5RAP3-227ENST00000583352 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-227ENST00000583352 EIF2S2P20042 333 aaKnown RBP12.71□□□□□ -0.37
CDK5RAP3-227ENST00000583352 VEGFBP49765 207 aa12.71□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
CDK5RAP3-227ENST00000583352 AIDAQ96BJ3 306 aa12.71□□□□□ -0.37
CDK5RAP3-227ENST00000583352 NLRP3Q96P20 1036 aa12.71□□□□□ -0.37
CDK5RAP3-227ENST00000583352 FOXN1O15353 648 aa12.7□□□□□ -0.38
CDK5RAP3-227ENST00000583352 RIPK4P57078 832 aa12.7□□□□□ -0.38
CDK5RAP3-227ENST00000583352 NIM1KQ8IY84 436 aa12.7□□□□□ -0.38
CDK5RAP3-227ENST00000583352 UTP14AQ9BVJ6 771 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-227ENST00000583352 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
CDK5RAP3-227ENST00000583352 COL4A5P29400 1685 aa12.7□□□□□ -0.38
CDK5RAP3-227ENST00000583352 CTCFP49711 727 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-227ENST00000583352 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
CDK5RAP3-227ENST00000583352 PDIA6Q15084 440 aa12.69□□□□□ -0.38
CDK5RAP3-227ENST00000583352 DEFB115Q30KQ5 88 aa12.69□□□□□ -0.38
CDK5RAP3-227ENST00000583352 C3orf67Q6ZVT6 689 aa12.69□□□□□ -0.38
CDK5RAP3-227ENST00000583352 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 PPIP5K2O43314 1243 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 RALBP1Q15311 655 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 HSP90AB3PQ58FF7 597 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 LRP10Q7Z4F1 713 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 VPS33BQ9H267 617 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 PRDM10Q9NQV6 1147 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 ABT1Q9ULW3 272 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 ATP6V0A2Q9Y487 856 aa12.68□□□□□ -0.38
CDK5RAP3-227ENST00000583352 ANXA1P04083 346 aa12.67□□□□□ -0.38
CDK5RAP3-227ENST00000583352 EPS15P42566 896 aa12.67□□□□□ -0.38
CDK5RAP3-227ENST00000583352 SCNN1DP51172 638 aa12.67□□□□□ -0.38
CDK5RAP3-227ENST00000583352 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
CDK5RAP3-227ENST00000583352 USP50Q70EL3 339 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-227ENST00000583352 DDX21Q9NR30 783 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDK5RAP3-227ENST00000583352 WBP1LQ9NX94 342 aa12.67□□□□□ -0.38
CDK5RAP3-227ENST00000583352 LTBP1Q14766 1721 aa12.67□□□□□ -0.38
CDK5RAP3-227ENST00000583352 ABCC4O15439 1325 aa12.66□□□□□ -0.38
CDK5RAP3-227ENST00000583352 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-227ENST00000583352 AIMP1Q12904 312 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-227ENST00000583352 AOC3Q16853 763 aa12.66□□□□□ -0.38
CDK5RAP3-227ENST00000583352 COPS6Q7L5N1 327 aa12.66□□□□□ -0.38
CDK5RAP3-227ENST00000583352 SLC51AQ86UW1 340 aa12.66□□□□□ -0.38
CDK5RAP3-227ENST00000583352 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
CDK5RAP3-227ENST00000583352 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-227ENST00000583352 BBOX1O75936 387 aa12.65□□□□□ -0.38
CDK5RAP3-227ENST00000583352 DPP8Q6V1X1 898 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-227ENST00000583352 NLRP10Q86W26 655 aa12.65□□□□□ -0.38
CDK5RAP3-227ENST00000583352 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
CDK5RAP3-227ENST00000583352 XAGE3Q8WTP9 111 aa12.65□□□□□ -0.38
CDK5RAP3-227ENST00000583352 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
CDK5RAP3-227ENST00000583352 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
CDK5RAP3-227ENST00000583352 SH3TC1Q8TE82 1336 aa12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 HCLS1P14317 486 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 MAP2K1Q02750 393 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 TCIRG1Q13488 830 aa12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 DDX46Q7L014 1031 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 MPNDQ8N594 471 aa12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 RTFDC1Q9BY42 306 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 ADARB2Q9NS39 739 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 GPRC5DQ9NZD1 345 aa12.64□□□□□ -0.39
CDK5RAP3-227ENST00000583352 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms