RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 NUDCQ9Y266 331 aa16.42■□□□□ 0.22
TOP3A-215ENST00000583328 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
TOP3A-215ENST00000583328 DCTN1Q14203 1278 aa16.41■□□□□ 0.22
TOP3A-215ENST00000583328 CRY2Q49AN0 593 aa16.41■□□□□ 0.22
TOP3A-215ENST00000583328 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
TOP3A-215ENST00000583328 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
TOP3A-215ENST00000583328 ARFGEF2Q9Y6D5 1785 aa16.41■□□□□ 0.22
TOP3A-215ENST00000583328 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
TOP3A-215ENST00000583328 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
TOP3A-215ENST00000583328 GRIPAP1Q4V328 841 aa16.4■□□□□ 0.22
TOP3A-215ENST00000583328 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
TOP3A-215ENST00000583328 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
TOP3A-215ENST00000583328 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
TOP3A-215ENST00000583328 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
TOP3A-215ENST00000583328 SCNN1DP51172 638 aa16.39■□□□□ 0.21
TOP3A-215ENST00000583328 MLLT1Q03111 559 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-215ENST00000583328 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-215ENST00000583328 SIPA1L3O60292 1781 aaPredicted RBP16.38■□□□□ 0.21
TOP3A-215ENST00000583328 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
TOP3A-215ENST00000583328 ERVV-1B6SEH8 477 aa16.38■□□□□ 0.21
TOP3A-215ENST00000583328 TRAF5O00463 557 aa16.38■□□□□ 0.21
TOP3A-215ENST00000583328 CST9Q5W186 159 aa16.38■□□□□ 0.21
TOP3A-215ENST00000583328 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
TOP3A-215ENST00000583328 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
TOP3A-215ENST00000583328 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
TOP3A-215ENST00000583328 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
TOP3A-215ENST00000583328 HTATSF1O43719 755 aaKnown RBP16.37■□□□□ 0.21
TOP3A-215ENST00000583328 HOXA10P31260 410 aaPredicted RBP16.37■□□□□ 0.21
TOP3A-215ENST00000583328 TMX4Q9H1E5 349 aaPredicted RBP16.37■□□□□ 0.21
TOP3A-215ENST00000583328 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
TOP3A-215ENST00000583328 TLL2Q9Y6L7 1015 aa16.37■□□□□ 0.21
TOP3A-215ENST00000583328 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
TOP3A-215ENST00000583328 AOC2O75106 756 aa16.36■□□□□ 0.21
TOP3A-215ENST00000583328 GPTP24298 496 aa16.36■□□□□ 0.21
TOP3A-215ENST00000583328 MAP2K2P36507 400 aa16.36■□□□□ 0.21
TOP3A-215ENST00000583328 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
TOP3A-215ENST00000583328 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
TOP3A-215ENST00000583328 TSKSQ9UJT2 592 aa16.36■□□□□ 0.21
TOP3A-215ENST00000583328 MAP3K15Q6ZN16 1313 aa16.36■□□□□ 0.21
TOP3A-215ENST00000583328 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
TOP3A-215ENST00000583328 PPIP5K2O43314 1243 aa16.35■□□□□ 0.21
TOP3A-215ENST00000583328 RGS19P49795 217 aa16.35■□□□□ 0.21
TOP3A-215ENST00000583328 SUSD4Q5VX71 490 aa16.35■□□□□ 0.21
TOP3A-215ENST00000583328 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
TOP3A-215ENST00000583328 ADARB2Q9NS39 739 aaKnown RBP16.35■□□□□ 0.21
TOP3A-215ENST00000583328 CELF2O95319 508 aaKnown RBP16.34■□□□□ 0.21
TOP3A-215ENST00000583328 TTLL7Q6ZT98 887 aa16.34■□□□□ 0.21
TOP3A-215ENST00000583328 MYL6BP14649 208 aa16.33■□□□□ 0.2
TOP3A-215ENST00000583328 AOC3Q16853 763 aa16.33■□□□□ 0.2
TOP3A-215ENST00000583328 SLC51AQ86UW1 340 aa16.33■□□□□ 0.2
TOP3A-215ENST00000583328 PNISRQ8TF01 805 aaKnown RBP16.33■□□□□ 0.2
TOP3A-215ENST00000583328 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.2
TOP3A-215ENST00000583328 GPRC5DQ9NZD1 345 aa16.33■□□□□ 0.2
TOP3A-215ENST00000583328 CA12O43570 354 aa16.32■□□□□ 0.2
TOP3A-215ENST00000583328 COL4A5P29400 1685 aa16.32■□□□□ 0.2
TOP3A-215ENST00000583328 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
TOP3A-215ENST00000583328 SAPCD2Q86UD0 394 aa16.32■□□□□ 0.2
TOP3A-215ENST00000583328 NLRP3Q96P20 1036 aa16.32■□□□□ 0.2
TOP3A-215ENST00000583328 VPS33BQ9H267 617 aa16.32■□□□□ 0.2
TOP3A-215ENST00000583328 CXCL9Q07325 125 aa16.31■□□□□ 0.2
TOP3A-215ENST00000583328 PPP1R42Q7Z4L9 355 aa16.31■□□□□ 0.2
TOP3A-215ENST00000583328 ZNF34Q8IZ26 560 aa16.31■□□□□ 0.2
TOP3A-215ENST00000583328 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
TOP3A-215ENST00000583328 GLIS2Q9BZE0 524 aaPredicted RBP16.31■□□□□ 0.2
TOP3A-215ENST00000583328 MCOLN1Q9GZU1 580 aa16.31■□□□□ 0.2
TOP3A-215ENST00000583328 ZNRF3Q9ULT6 936 aa16.31■□□□□ 0.2
TOP3A-215ENST00000583328 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
TOP3A-215ENST00000583328 NEFMP07197 916 aa16.3■□□□□ 0.2
TOP3A-215ENST00000583328 GMPSP49915 693 aaPredicted RBP16.3■□□□□ 0.2
TOP3A-215ENST00000583328 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
TOP3A-215ENST00000583328 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
TOP3A-215ENST00000583328 ZNF408Q9H9D4 720 aa16.3■□□□□ 0.2
TOP3A-215ENST00000583328 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
TOP3A-215ENST00000583328 LTBP1Q14766 1721 aa16.3■□□□□ 0.2
TOP3A-215ENST00000583328 NTSR2O95665 410 aa16.29■□□□□ 0.2
TOP3A-215ENST00000583328 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
TOP3A-215ENST00000583328 EIF4A1P60842 406 aaKnown RBP16.29■□□□□ 0.2
TOP3A-215ENST00000583328 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
TOP3A-215ENST00000583328 GIGYF2Q6Y7W6 1299 aaKnown RBP16.29■□□□□ 0.2
TOP3A-215ENST00000583328 HHIPL1Q96JK4 782 aa16.29■□□□□ 0.2
TOP3A-215ENST00000583328 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
TOP3A-215ENST00000583328 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
TOP3A-215ENST00000583328 CIAPIN1Q6FI81 312 aa16.28■□□□□ 0.2
TOP3A-215ENST00000583328 RAD17O75943 681 aa16.27■□□□□ 0.2
TOP3A-215ENST00000583328 DGKZQ13574 1117 aa16.27■□□□□ 0.2
TOP3A-215ENST00000583328 TNIP1Q15025 636 aa16.27■□□□□ 0.2
TOP3A-215ENST00000583328 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-215ENST00000583328 CDC37L1Q7L3B6 337 aa16.27■□□□□ 0.2
TOP3A-215ENST00000583328 MPNDQ8N594 471 aa16.27■□□□□ 0.2
TOP3A-215ENST00000583328 ZC3H15Q8WU90 426 aaKnown RBP16.27■□□□□ 0.2
TOP3A-215ENST00000583328 UTP14AQ9BVJ6 771 aaKnown RBP16.27■□□□□ 0.2
TOP3A-215ENST00000583328 RTFDC1Q9BY42 306 aaPredicted RBP16.27■□□□□ 0.2
TOP3A-215ENST00000583328 PGAP2Q9UHJ9 254 aa16.27■□□□□ 0.2
TOP3A-215ENST00000583328 BBOX1O75936 387 aa16.26■□□□□ 0.19
TOP3A-215ENST00000583328 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
TOP3A-215ENST00000583328 SLC10A5Q5PT55 438 aa16.26■□□□□ 0.19
TOP3A-215ENST00000583328 ABCC4O15439 1325 aa16.25■□□□□ 0.19
TOP3A-215ENST00000583328 SP8Q8IXZ3 490 aa16.25■□□□□ 0.19
TOP3A-215ENST00000583328 THSD7BQ9C0I4 1608 aa16.25■□□□□ 0.19
TOP3A-215ENST00000583328 CDHR2Q9BYE9 1310 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms