RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
ERBB2-213ENST00000582818 ADAMTSL1Q8N6G6 1762 aa18.37■□□□□ 0.53
ERBB2-213ENST00000582818 FAM177BA6PVY3 158 aa18.36■□□□□ 0.53
ERBB2-213ENST00000582818 HSPA1AP0DMV8 641 aaKnown RBP18.36■□□□□ 0.53
ERBB2-213ENST00000582818 HSPA1BP0DMV9 641 aaKnown RBP18.36■□□□□ 0.53
ERBB2-213ENST00000582818 PPP1R42Q7Z4L9 355 aa18.36■□□□□ 0.53
ERBB2-213ENST00000582818 ABCC12Q96J65 1359 aa18.36■□□□□ 0.53
ERBB2-213ENST00000582818 ZNF541Q9H0D2 1346 aa18.35■□□□□ 0.53
ERBB2-213ENST00000582818 DIEXFQ68CQ4 756 aaKnown RBP18.35■□□□□ 0.53
ERBB2-213ENST00000582818 TTLL7Q6ZT98 887 aa18.35■□□□□ 0.53
ERBB2-213ENST00000582818 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
ERBB2-213ENST00000582818 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
ERBB2-213ENST00000582818 MRS2Q9HD23 443 aa18.35■□□□□ 0.53
ERBB2-213ENST00000582818 ADAMTS8Q9UP79 889 aa18.35■□□□□ 0.53
ERBB2-213ENST00000582818 CNTNAP1P78357 1384 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 UBN2Q6ZU65 1347 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 ITGBL1O95965 494 aaPredicted RBP18.34■□□□□ 0.53
ERBB2-213ENST00000582818 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 POTEJP0CG39 1038 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 MYL6BP14649 208 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 EPHX2P34913 555 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 SLC10A5Q5PT55 438 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 NUTM1Q86Y26 1132 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 TNS4Q8IZW8 715 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 RUNDC1Q96C34 613 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 TSPYL4Q9UJ04 414 aa18.34■□□□□ 0.53
ERBB2-213ENST00000582818 TMEM88BA6NKF7 163 aa18.33■□□□□ 0.52
ERBB2-213ENST00000582818 NTSR2O95665 410 aa18.33■□□□□ 0.52
ERBB2-213ENST00000582818 SUSD4Q5VX71 490 aa18.33■□□□□ 0.52
ERBB2-213ENST00000582818 LRP10Q7Z4F1 713 aa18.33■□□□□ 0.52
ERBB2-213ENST00000582818 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.52
ERBB2-213ENST00000582818 EIF6P56537 245 aaKnown RBP18.32■□□□□ 0.52
ERBB2-213ENST00000582818 HSP90AB3PQ58FF7 597 aa18.32■□□□□ 0.52
ERBB2-213ENST00000582818 OLFM4Q6UX06 510 aa18.32■□□□□ 0.52
ERBB2-213ENST00000582818 NLRP3Q96P20 1036 aa18.32■□□□□ 0.52
ERBB2-213ENST00000582818 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
ERBB2-213ENST00000582818 TMX4Q9H1E5 349 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-213ENST00000582818 GPTP24298 496 aa18.31■□□□□ 0.52
ERBB2-213ENST00000582818 RIPK4P57078 832 aa18.31■□□□□ 0.52
ERBB2-213ENST00000582818 PDIA6Q15084 440 aa18.31■□□□□ 0.52
ERBB2-213ENST00000582818 ANKRD36CQ5JPF3 1778 aa18.31■□□□□ 0.52
ERBB2-213ENST00000582818 CCER2I3L3R5 266 aa18.3■□□□□ 0.52
ERBB2-213ENST00000582818 EAPPQ56P03 285 aaPredicted RBP18.3■□□□□ 0.52
ERBB2-213ENST00000582818 UTP14AQ9BVJ6 771 aaKnown RBP18.3■□□□□ 0.52
ERBB2-213ENST00000582818 PPEF1O14829 653 aaPredicted RBP18.29■□□□□ 0.52
ERBB2-213ENST00000582818 LMOD1P29536 600 aaPredicted RBP18.29■□□□□ 0.52
ERBB2-213ENST00000582818 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
ERBB2-213ENST00000582818 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
ERBB2-213ENST00000582818 MKRN1Q9UHC7 482 aaKnown RBP18.29■□□□□ 0.52
ERBB2-213ENST00000582818 ATP6V0A2Q9Y487 856 aa18.29■□□□□ 0.52
ERBB2-213ENST00000582818 BBOX1O75936 387 aa18.28■□□□□ 0.52
ERBB2-213ENST00000582818 CNTROBQ8N137 903 aa18.28■□□□□ 0.52
ERBB2-213ENST00000582818 LARGE2Q8N3Y3 721 aa18.28■□□□□ 0.52
ERBB2-213ENST00000582818 CLEC11AQ9Y240 323 aa18.28■□□□□ 0.52
ERBB2-213ENST00000582818 CCDC184Q52MB2 194 aa18.27■□□□□ 0.52
ERBB2-213ENST00000582818 RTFDC1Q9BY42 306 aaPredicted RBP18.27■□□□□ 0.52
ERBB2-213ENST00000582818 PRDM10Q9NQV6 1147 aa18.27■□□□□ 0.52
ERBB2-213ENST00000582818 TRPM7Q96QT4 1865 aa18.26■□□□□ 0.51
ERBB2-213ENST00000582818 RASSF10A6NK89 507 aa18.26■□□□□ 0.51
ERBB2-213ENST00000582818 HOXB7P09629 217 aa18.26■□□□□ 0.51
ERBB2-213ENST00000582818 EIF2S2P20042 333 aaKnown RBP18.26■□□□□ 0.51
ERBB2-213ENST00000582818 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
ERBB2-213ENST00000582818 USP50Q70EL3 339 aaPredicted RBP18.26■□□□□ 0.51
ERBB2-213ENST00000582818 TMC4Q7Z404 712 aa18.26■□□□□ 0.51
ERBB2-213ENST00000582818 NIM1KQ8IY84 436 aa18.26■□□□□ 0.51
ERBB2-213ENST00000582818 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
ERBB2-213ENST00000582818 COL4A5P29400 1685 aa18.25■□□□□ 0.51
ERBB2-213ENST00000582818 LAMB2P55268 1798 aa18.25■□□□□ 0.51
ERBB2-213ENST00000582818 CHL1O00533 1208 aa18.25■□□□□ 0.51
ERBB2-213ENST00000582818 VEGFBP49765 207 aa18.24■□□□□ 0.51
ERBB2-213ENST00000582818 SCNN1DP51172 638 aa18.24■□□□□ 0.51
ERBB2-213ENST00000582818 TCIRG1Q13488 830 aa18.24■□□□□ 0.51
ERBB2-213ENST00000582818 NLRP10Q86W26 655 aa18.24■□□□□ 0.51
ERBB2-213ENST00000582818 SP8Q8IXZ3 490 aa18.24■□□□□ 0.51
ERBB2-213ENST00000582818 AIDAQ96BJ3 306 aa18.24■□□□□ 0.51
ERBB2-213ENST00000582818 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 PPIP5K2O43314 1243 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 CTCFP49711 727 aaPredicted RBP18.23■□□□□ 0.51
ERBB2-213ENST00000582818 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 MAP1SQ66K74 1059 aaPredicted RBP18.23■□□□□ 0.51
ERBB2-213ENST00000582818 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 COPS6Q7L5N1 327 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 CCDC146Q8IYE0 955 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 ZNRF3Q9ULT6 936 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 GJA3Q9Y6H8 435 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 LTBP1Q14766 1721 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 ABCC4O15439 1325 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
ERBB2-213ENST00000582818 WBP1LQ9NX94 342 aa18.22■□□□□ 0.51
ERBB2-213ENST00000582818 MAP2K1Q02750 393 aaPredicted RBP18.21■□□□□ 0.51
ERBB2-213ENST00000582818 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
ERBB2-213ENST00000582818 XAGE3Q8WTP9 111 aa18.21■□□□□ 0.51
ERBB2-213ENST00000582818 GPRC5DQ9NZD1 345 aa18.21■□□□□ 0.51
ERBB2-213ENST00000582818 APAF1O14727 1248 aa18.2■□□□□ 0.5
ERBB2-213ENST00000582818 FOXN1O15353 648 aa18.2■□□□□ 0.5
ERBB2-213ENST00000582818 EPS15P42566 896 aa18.2■□□□□ 0.5
ERBB2-213ENST00000582818 CALD1Q05682 793 aaKnown RBP18.2■□□□□ 0.5
ERBB2-213ENST00000582818 KIAA2012Q0VF49 1180 aa18.2■□□□□ 0.5
ERBB2-213ENST00000582818 GRAPQ13588 217 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms