RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 TRMT112Q9UI30 125 aaKnown RBP25.46■■□□□ 1.67
TOP3A-213ENST00000582230 SYT17Q9BSW7 474 aa25.45■■□□□ 1.66
TOP3A-213ENST00000582230 BRIP1Q9BX63 1249 aa25.45■■□□□ 1.66
TOP3A-213ENST00000582230 NEURL1BA8MQ27 555 aa25.44■■□□□ 1.66
TOP3A-213ENST00000582230 TGFB2P61812 414 aa25.44■■□□□ 1.66
TOP3A-213ENST00000582230 BEND3Q5T5X7 828 aa25.44■■□□□ 1.66
TOP3A-213ENST00000582230 SLC4A10Q6U841 1118 aa25.44■■□□□ 1.66
TOP3A-213ENST00000582230 FRAT1Q92837 279 aaPredicted RBP25.44■■□□□ 1.66
TOP3A-213ENST00000582230 ANKRD36CQ5JPF3 1778 aa25.44■■□□□ 1.66
TOP3A-213ENST00000582230 SH3TC1Q8TE82 1336 aa25.43■■□□□ 1.66
TOP3A-213ENST00000582230 CWF19L2Q2TBE0 894 aaKnown RBP25.43■■□□□ 1.66
TOP3A-213ENST00000582230 NUTM1Q86Y26 1132 aa25.43■■□□□ 1.66
TOP3A-213ENST00000582230 PDE6BP35913 854 aa25.42■■□□□ 1.66
TOP3A-213ENST00000582230 ERFEQ4G0M1 354 aa25.42■■□□□ 1.66
TOP3A-213ENST00000582230 SLC10A5Q5PT55 438 aa25.42■■□□□ 1.66
TOP3A-213ENST00000582230 ZBTB38Q8NAP3 1195 aaPredicted RBP25.42■■□□□ 1.66
TOP3A-213ENST00000582230 PDZRN3Q9UPQ7 1066 aa25.42■■□□□ 1.66
TOP3A-213ENST00000582230 ALDH1L1O75891 902 aa25.41■■□□□ 1.66
TOP3A-213ENST00000582230 ZKSCAN2Q63HK3 967 aa25.41■■□□□ 1.66
TOP3A-213ENST00000582230 ATF7IPQ6VMQ6 1270 aa25.41■■□□□ 1.66
TOP3A-213ENST00000582230 CCDC24Q8N4L8 307 aa25.41■■□□□ 1.66
TOP3A-213ENST00000582230 SRCIN1Q9C0H9 1055 aa25.41■■□□□ 1.66
TOP3A-213ENST00000582230 AFDNP55196 1824 aaKnown RBP25.41■■□□□ 1.66
TOP3A-213ENST00000582230 PCCAP05165 728 aaPredicted RBP25.4■■□□□ 1.66
TOP3A-213ENST00000582230 HSP90B1P14625 803 aaKnown RBP25.4■■□□□ 1.66
TOP3A-213ENST00000582230 GCKRQ14397 625 aa25.4■■□□□ 1.66
TOP3A-213ENST00000582230 FAM89AQ96GI7 184 aa25.39■■□□□ 1.66
TOP3A-213ENST00000582230 PXDNLA1KZ92 1463 aa25.39■■□□□ 1.65
TOP3A-213ENST00000582230 RIC1Q4ADV7 1423 aa25.38■■□□□ 1.65
TOP3A-213ENST00000582230 TRIM27P14373 513 aa25.38■■□□□ 1.65
TOP3A-213ENST00000582230 CCT4P50991 539 aaKnown RBP25.38■■□□□ 1.65
TOP3A-213ENST00000582230 ABCC12Q96J65 1359 aa25.37■■□□□ 1.65
TOP3A-213ENST00000582230 KLRG2A4D1S0 409 aaPredicted RBP25.37■■□□□ 1.65
TOP3A-213ENST00000582230 H0YIN7 160 aa25.37■■□□□ 1.65
TOP3A-213ENST00000582230 NLGN2Q8NFZ4 835 aa25.37■■□□□ 1.65
TOP3A-213ENST00000582230 KIF13BQ9NQT8 1826 aa25.36■■□□□ 1.65
TOP3A-213ENST00000582230 H7C1W4 665 aa25.36■■□□□ 1.65
TOP3A-213ENST00000582230 SYNE4Q8N205 404 aa25.36■■□□□ 1.65
TOP3A-213ENST00000582230 NLRP3Q96P20 1036 aa25.36■■□□□ 1.65
TOP3A-213ENST00000582230 A0A0G2JLW4 131 aa25.35■■□□□ 1.65
TOP3A-213ENST00000582230 DPEP1P16444 411 aa25.35■■□□□ 1.65
TOP3A-213ENST00000582230 C2CD5Q86YS7 1000 aa25.35■■□□□ 1.65
TOP3A-213ENST00000582230 ABCC4O15439 1325 aa25.35■■□□□ 1.65
TOP3A-213ENST00000582230 CDHR2Q9BYE9 1310 aa25.35■■□□□ 1.65
TOP3A-213ENST00000582230 IRS4O14654 1257 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-213ENST00000582230 HCLS1P14317 486 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-213ENST00000582230 RTL5Q5HYW3 569 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-213ENST00000582230 C9orf78Q9NZ63 289 aaPredicted RBP25.34■■□□□ 1.65
TOP3A-213ENST00000582230 GRM8O00222 908 aa25.33■■□□□ 1.65
TOP3A-213ENST00000582230 MS4A1P11836 297 aa25.33■■□□□ 1.65
TOP3A-213ENST00000582230 CHRNA5P30532 468 aa25.33■■□□□ 1.65
TOP3A-213ENST00000582230 INTS3Q68E01 1043 aaKnown RBP25.33■■□□□ 1.65
TOP3A-213ENST00000582230 UBE3BQ7Z3V4 1068 aa25.33■■□□□ 1.65
TOP3A-213ENST00000582230 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.33■■□□□ 1.65
TOP3A-213ENST00000582230 SRGNP10124 158 aa25.32■■□□□ 1.64
TOP3A-213ENST00000582230 CRY2Q49AN0 593 aa25.32■■□□□ 1.64
TOP3A-213ENST00000582230 NPR1P16066 1061 aa25.31■■□□□ 1.64
TOP3A-213ENST00000582230 KCNA3P22001 575 aa25.31■■□□□ 1.64
TOP3A-213ENST00000582230 FTSJ3Q8IY81 847 aaKnown RBP25.31■■□□□ 1.64
TOP3A-213ENST00000582230 DZIP1LQ8IYY4 767 aaKnown RBP25.31■■□□□ 1.64
TOP3A-213ENST00000582230 JARID2Q92833 1246 aaPredicted RBP25.31■■□□□ 1.64
TOP3A-213ENST00000582230 CLUAP1Q96AJ1 413 aa25.31■■□□□ 1.64
TOP3A-213ENST00000582230 PIM2Q9P1W9 311 aa25.31■■□□□ 1.64
TOP3A-213ENST00000582230 PDE8AO60658 829 aa25.3■■□□□ 1.64
TOP3A-213ENST00000582230 CASP7P55210 303 aa25.3■■□□□ 1.64
TOP3A-213ENST00000582230 STYK1Q6J9G0 422 aa25.3■■□□□ 1.64
TOP3A-213ENST00000582230 MASTLQ96GX5 879 aa25.3■■□□□ 1.64
TOP3A-213ENST00000582230 SRCAPQ6ZRS2 3230 aa25.29■■□□□ 1.64
TOP3A-213ENST00000582230 RPGRQ92834 1020 aaKnown RBP25.29■■□□□ 1.64
TOP3A-213ENST00000582230 UTYO14607 1347 aa25.29■■□□□ 1.64
TOP3A-213ENST00000582230 ANKRD31Q8N7Z5 1873 aa25.28■■□□□ 1.64
TOP3A-213ENST00000582230 SF3B3Q15393 1217 aaKnown RBP25.28■■□□□ 1.64
TOP3A-213ENST00000582230 ZNF622Q969S3 477 aaKnown RBP eCLIP25.28■■□□□ 1.64
TOP3A-213ENST00000582230 PLA2G12BQ9BX93 195 aa25.28■■□□□ 1.64
TOP3A-213ENST00000582230 TNNQ9UQP3 1299 aa25.28■■□□□ 1.64
TOP3A-213ENST00000582230 HOXA10P31260 410 aaPredicted RBP25.27■■□□□ 1.64
TOP3A-213ENST00000582230 C3orf67Q6ZVT6 689 aa25.27■■□□□ 1.64
TOP3A-213ENST00000582230 CNKSR1Q969H4 720 aa25.27■■□□□ 1.64
TOP3A-213ENST00000582230 RBM17Q96I25 401 aaKnown RBP25.27■■□□□ 1.64
TOP3A-213ENST00000582230 USP44Q9H0E7 712 aa25.27■■□□□ 1.64
TOP3A-213ENST00000582230 ALDH1B1P30837 517 aa25.26■■□□□ 1.63
TOP3A-213ENST00000582230 TTLL6Q8N841 843 aa25.26■■□□□ 1.63
TOP3A-213ENST00000582230 KIAA1551Q9HCM1 1747 aa25.26■■□□□ 1.63
TOP3A-213ENST00000582230 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
TOP3A-213ENST00000582230 DALRD3Q5D0E6 543 aaKnown RBP25.25■■□□□ 1.63
TOP3A-213ENST00000582230 TMEM57Q8N5G2 664 aa25.25■■□□□ 1.63
TOP3A-213ENST00000582230 CRAMP1Q96RY5 1269 aa25.25■■□□□ 1.63
TOP3A-213ENST00000582230 HDAC5Q9UQL6 1122 aa25.25■■□□□ 1.63
TOP3A-213ENST00000582230 TNRC6CQ9HCJ0 1690 aaKnown RBP25.24■■□□□ 1.63
TOP3A-213ENST00000582230 PLIN1O60240 522 aa25.24■■□□□ 1.63
TOP3A-213ENST00000582230 CTSWP56202 376 aa25.24■■□□□ 1.63
TOP3A-213ENST00000582230 CCDC152Q4G0S7 254 aa25.24■■□□□ 1.63
TOP3A-213ENST00000582230 PDE3AQ14432 1141 aa25.23■■□□□ 1.63
TOP3A-213ENST00000582230 DDX46Q7L014 1031 aaKnown RBP25.23■■□□□ 1.63
TOP3A-213ENST00000582230 RLBP1P12271 317 aa25.22■■□□□ 1.63
TOP3A-213ENST00000582230 N4BP2Q86UW6 1770 aaPredicted RBP25.22■■□□□ 1.63
TOP3A-213ENST00000582230 DDX60Q8IY21 1712 aaKnown RBP25.21■■□□□ 1.63
TOP3A-213ENST00000582230 DCAF8L1A6NGE4 600 aa25.21■■□□□ 1.63
TOP3A-213ENST00000582230 GNAI3P08754 354 aa25.21■■□□□ 1.63
TOP3A-213ENST00000582230 UBTFL1P0CB47 393 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms