RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 LAMB2P55268 1798 aa16.65■□□□□ 0.26
CDC42EP4-207ENST00000581045 F6X3S4 739 aa16.65■□□□□ 0.26
CDC42EP4-207ENST00000581045 NTSR2O95665 410 aa16.65■□□□□ 0.26
CDC42EP4-207ENST00000581045 C2CD5Q86YS7 1000 aa16.65■□□□□ 0.26
CDC42EP4-207ENST00000581045 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
CDC42EP4-207ENST00000581045 METTL22Q9BUU2 404 aaPredicted RBP16.65■□□□□ 0.26
CDC42EP4-207ENST00000581045 TRMT112Q9UI30 125 aaKnown RBP16.65■□□□□ 0.26
CDC42EP4-207ENST00000581045 CT47B1P0C2W7 299 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-207ENST00000581045 TGFB2P61812 414 aa16.64■□□□□ 0.25
CDC42EP4-207ENST00000581045 DDX60Q8IY21 1712 aaKnown RBP16.64■□□□□ 0.25
CDC42EP4-207ENST00000581045 PDE6BP35913 854 aa16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 GPR162Q16538 588 aa16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 CWF19L2Q2TBE0 894 aaKnown RBP16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 SLC4A10Q6U841 1118 aa16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 DNAAF4Q8WXU2 420 aa16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 IBTKQ9P2D0 1353 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP4-207ENST00000581045 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
CDC42EP4-207ENST00000581045 H0YIN7 160 aa16.62■□□□□ 0.25
CDC42EP4-207ENST00000581045 RARSP54136 660 aaKnown RBP16.62■□□□□ 0.25
CDC42EP4-207ENST00000581045 JARID2Q92833 1246 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP4-207ENST00000581045 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
CDC42EP4-207ENST00000581045 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP4-207ENST00000581045 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
CDC42EP4-207ENST00000581045 CWC25Q9NXE8 425 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP4-207ENST00000581045 BCS1LQ9Y276 419 aa16.61■□□□□ 0.25
CDC42EP4-207ENST00000581045 IGKV5-2P06315 115 aa16.6■□□□□ 0.25
CDC42EP4-207ENST00000581045 YBX3P16989 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDC42EP4-207ENST00000581045 KCNA3P22001 575 aa16.6■□□□□ 0.25
CDC42EP4-207ENST00000581045 SH3TC1Q8TE82 1336 aa16.6■□□□□ 0.25
CDC42EP4-207ENST00000581045 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
CDC42EP4-207ENST00000581045 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
CDC42EP4-207ENST00000581045 BCAR3O75815 825 aa16.59■□□□□ 0.25
CDC42EP4-207ENST00000581045 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
CDC42EP4-207ENST00000581045 PIM2Q9P1W9 311 aa16.59■□□□□ 0.25
CDC42EP4-207ENST00000581045 NOB1Q9ULX3 412 aaKnown RBP16.59■□□□□ 0.25
CDC42EP4-207ENST00000581045 TAF1P21675 1872 aa16.59■□□□□ 0.25
CDC42EP4-207ENST00000581045 MYH3P11055 1940 aa16.58■□□□□ 0.25
CDC42EP4-207ENST00000581045 TRIM28Q13263 835 aaKnown RBP16.58■□□□□ 0.24
CDC42EP4-207ENST00000581045 C3orf67Q6ZVT6 689 aa16.58■□□□□ 0.24
CDC42EP4-207ENST00000581045 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
CDC42EP4-207ENST00000581045 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
CDC42EP4-207ENST00000581045 PTPRCP08575 1304 aa16.58■□□□□ 0.24
CDC42EP4-207ENST00000581045 SLX4Q8IY92 1834 aa16.58■□□□□ 0.24
CDC42EP4-207ENST00000581045 RNF123Q5XPI4 1314 aa16.57■□□□□ 0.24
CDC42EP4-207ENST00000581045 SRGNP10124 158 aa16.57■□□□□ 0.24
CDC42EP4-207ENST00000581045 DALRD3Q5D0E6 543 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-207ENST00000581045 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
CDC42EP4-207ENST00000581045 LINS1Q8NG48 757 aa16.57■□□□□ 0.24
CDC42EP4-207ENST00000581045 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-207ENST00000581045 GOLGB1Q14789 3259 aaKnown RBP16.57■□□□□ 0.24
CDC42EP4-207ENST00000581045 RIC1Q4ADV7 1423 aa16.56■□□□□ 0.24
CDC42EP4-207ENST00000581045 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
CDC42EP4-207ENST00000581045 IRS4O14654 1257 aaPredicted RBP16.56■□□□□ 0.24
CDC42EP4-207ENST00000581045 BEND3Q5T5X7 828 aa16.56■□□□□ 0.24
CDC42EP4-207ENST00000581045 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
CDC42EP4-207ENST00000581045 NLRP3Q96P20 1036 aa16.56■□□□□ 0.24
CDC42EP4-207ENST00000581045 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
CDC42EP4-207ENST00000581045 NPR1P16066 1061 aa16.55■□□□□ 0.24
CDC42EP4-207ENST00000581045 GCKRQ14397 625 aa16.55■□□□□ 0.24
CDC42EP4-207ENST00000581045 UBE3BQ7Z3V4 1068 aa16.55■□□□□ 0.24
CDC42EP4-207ENST00000581045 TTLL6Q8N841 843 aa16.55■□□□□ 0.24
CDC42EP4-207ENST00000581045 PDZRN3Q9UPQ7 1066 aa16.55■□□□□ 0.24
CDC42EP4-207ENST00000581045 SLC10A5Q5PT55 438 aa16.54■□□□□ 0.24
CDC42EP4-207ENST00000581045 STYK1Q6J9G0 422 aa16.54■□□□□ 0.24
CDC42EP4-207ENST00000581045 SRCIN1Q9C0H9 1055 aa16.54■□□□□ 0.24
CDC42EP4-207ENST00000581045 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
CDC42EP4-207ENST00000581045 PRPF40BQ6NWY9 871 aaKnown RBP16.53■□□□□ 0.24
CDC42EP4-207ENST00000581045 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
CDC42EP4-207ENST00000581045 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
CDC42EP4-207ENST00000581045 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
CDC42EP4-207ENST00000581045 TNNQ9UQP3 1299 aa16.53■□□□□ 0.24
CDC42EP4-207ENST00000581045 KLRG2A4D1S0 409 aaPredicted RBP16.52■□□□□ 0.24
CDC42EP4-207ENST00000581045 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.24
CDC42EP4-207ENST00000581045 CRY2Q49AN0 593 aa16.52■□□□□ 0.24
CDC42EP4-207ENST00000581045 RBM17Q96I25 401 aaKnown RBP16.52■□□□□ 0.24
CDC42EP4-207ENST00000581045 C9orf78Q9NZ63 289 aaPredicted RBP16.52■□□□□ 0.24
CDC42EP4-207ENST00000581045 CHD4Q14839 1912 aa16.52■□□□□ 0.23
CDC42EP4-207ENST00000581045 C21orf2O43822 256 aa16.51■□□□□ 0.23
CDC42EP4-207ENST00000581045 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
CDC42EP4-207ENST00000581045 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
CDC42EP4-207ENST00000581045 CCDC88AQ3V6T2 1871 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 CDHR2Q9BYE9 1310 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 H7C1W4 665 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 GRM8O00222 908 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 GRIN3BO60391 1043 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 PDE8AO60658 829 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 DDX46Q7L014 1031 aaKnown RBP16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 RCAN3Q9UKA8 241 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 COL4A1P02462 1669 aa16.5■□□□□ 0.23
CDC42EP4-207ENST00000581045 ABCC4O15439 1325 aa16.49■□□□□ 0.23
CDC42EP4-207ENST00000581045 TRIM27P14373 513 aa16.49■□□□□ 0.23
CDC42EP4-207ENST00000581045 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
CDC42EP4-207ENST00000581045 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
CDC42EP4-207ENST00000581045 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms