RNA–Protein interactions for RNA: ENST00000581029.5

GAPLINC-203, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-203ENST00000581029 RWDD1Q9H446 243 aaPredicted RBP11.43□□□□□ -0.58
GAPLINC-203ENST00000581029 USP42Q9H9J4 1324 aaKnown RBP11.42□□□□□ -0.58
GAPLINC-203ENST00000581029 ANKRD36CQ5JPF3 1778 aa11.42□□□□□ -0.58
GAPLINC-203ENST00000581029 IRX6P78412 446 aaPredicted RBP11.42□□□□□ -0.58
GAPLINC-203ENST00000581029 ZBTB38Q8NAP3 1195 aaPredicted RBP11.42□□□□□ -0.58
GAPLINC-203ENST00000581029 SETDB2Q96T68 719 aa11.42□□□□□ -0.58
GAPLINC-203ENST00000581029 USP44Q9H0E7 712 aa11.42□□□□□ -0.58
GAPLINC-203ENST00000581029 UBR3Q6ZT12 1888 aa11.42□□□□□ -0.58
GAPLINC-203ENST00000581029 NUP98P52948 1817 aa11.42□□□□□ -0.58
GAPLINC-203ENST00000581029 BCORQ6W2J9 1755 aa11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 CDHR2Q9BYE9 1310 aa11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 QSER1Q2KHR3 1735 aa11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 PCCAP05165 728 aaPredicted RBP11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 IGKV5-2P06315 115 aa11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 KCNQ4P56696 695 aa11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 TPTE2Q6XPS3 522 aa11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 UTP14AQ9BVJ6 771 aaKnown RBP11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 NIP7Q9Y221 180 aaKnown RBP eCLIP11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 AFDNP55196 1824 aaKnown RBP11.41□□□□□ -0.58
GAPLINC-203ENST00000581029 SCN7AQ01118 1682 aa11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 H7C1W4 665 aa11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 PHF14O94880 888 aa11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 CWF19L2Q2TBE0 894 aaKnown RBP11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 USPL1Q5W0Q7 1092 aa11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 NLRP10Q86W26 655 aa11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 MEIS3Q99687 375 aa11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 PLA2G12BQ9BX93 195 aa11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 TNNQ9UQP3 1299 aa11.4□□□□□ -0.58
GAPLINC-203ENST00000581029 SH3TC1Q8TE82 1336 aa11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 NPHP1O15259 732 aa11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 DSG3P32926 999 aa11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 HDAC1Q13547 482 aaPredicted RBP11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 HLFQ16534 295 aa11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 HSP90AB4PQ58FF6 505 aa11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 TRMT112Q9UI30 125 aaKnown RBP11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 CARMIL3Q8ND23 1372 aa11.39□□□□□ -0.59
GAPLINC-203ENST00000581029 MTX1Q13505 466 aa11.38□□□□□ -0.59
GAPLINC-203ENST00000581029 CENPQQ7L2Z9 268 aaPredicted RBP11.38□□□□□ -0.59
GAPLINC-203ENST00000581029 DEFB132Q7Z7B7 95 aa11.38□□□□□ -0.59
GAPLINC-203ENST00000581029 ANKRD44Q8N8A2 993 aa11.38□□□□□ -0.59
GAPLINC-203ENST00000581029 GCC1Q96CN9 775 aa11.38□□□□□ -0.59
GAPLINC-203ENST00000581029 ATF5Q9Y2D1 282 aaPredicted RBP11.38□□□□□ -0.59
GAPLINC-203ENST00000581029 C4AP0C0L4 1744 aa11.38□□□□□ -0.59
GAPLINC-203ENST00000581029 PDE8AO60658 829 aa11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 NBPF7P0C2Y1 421 aaPredicted RBP11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 GYS1P13807 737 aa11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 ATP8B2P98198 1209 aa11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 ZNF827Q17R98 1081 aa11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 UBE3BQ7Z3V4 1068 aa11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 NBPF5PQ86XG9 351 aaPredicted RBP11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 LRRFIP2Q9Y608 721 aaKnown RBP11.37□□□□□ -0.59
GAPLINC-203ENST00000581029 PNPLA7Q6ZV29 1317 aa11.36□□□□□ -0.59
GAPLINC-203ENST00000581029 GPTP24298 496 aa11.36□□□□□ -0.59
GAPLINC-203ENST00000581029 ST5P78524 1137 aa11.36□□□□□ -0.59
GAPLINC-203ENST00000581029 SLC10A5Q5PT55 438 aa11.36□□□□□ -0.59
GAPLINC-203ENST00000581029 CEP85Q6P2H3 762 aa11.36□□□□□ -0.59
GAPLINC-203ENST00000581029 COL23A1Q86Y22 540 aaPredicted RBP11.36□□□□□ -0.59
GAPLINC-203ENST00000581029 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
GAPLINC-203ENST00000581029 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
GAPLINC-203ENST00000581029 IRS4O14654 1257 aaPredicted RBP11.35□□□□□ -0.59
GAPLINC-203ENST00000581029 RABL6Q3YEC7 729 aaPredicted RBP11.35□□□□□ -0.59
GAPLINC-203ENST00000581029 SUSD4Q5VX71 490 aa11.35□□□□□ -0.59
GAPLINC-203ENST00000581029 TBC1D9BQ66K14 1250 aa11.35□□□□□ -0.59
GAPLINC-203ENST00000581029 NLRP3Q96P20 1036 aa11.35□□□□□ -0.59
GAPLINC-203ENST00000581029 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
GAPLINC-203ENST00000581029 SRP68Q9UHB9 627 aaKnown RBP11.35□□□□□ -0.59
GAPLINC-203ENST00000581029 RIC1Q4ADV7 1423 aa11.35□□□□□ -0.59
GAPLINC-203ENST00000581029 SRGAP3O43295 1099 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 RAB11FIP3O75154 756 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 NTSR2O95665 410 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 TM4SF1P30408 202 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 CASP7P55210 303 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 NFIXQ14938 502 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 CCDC152Q4G0S7 254 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 CNBD1Q8NA66 436 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 SSH3Q8TE77 659 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 PCDHB15Q9Y5E8 787 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 UBN2Q6ZU65 1347 aa11.34□□□□□ -0.59
GAPLINC-203ENST00000581029 COL24A1Q17RW2 1714 aa11.33□□□□□ -0.6
GAPLINC-203ENST00000581029 SERPINB2P05120 415 aa11.33□□□□□ -0.6
GAPLINC-203ENST00000581029 CCDC57Q2TAC2 916 aa11.33□□□□□ -0.6
GAPLINC-203ENST00000581029 BICDL1Q6ZP65 573 aa11.33□□□□□ -0.6
GAPLINC-203ENST00000581029 FAM89AQ96GI7 184 aa11.33□□□□□ -0.6
GAPLINC-203ENST00000581029 SUCLG2Q96I99 432 aa11.33□□□□□ -0.6
GAPLINC-203ENST00000581029 RTL9Q8NET4 1388 aa11.32□□□□□ -0.6
GAPLINC-203ENST00000581029 ANKRD18BA2A2Z9 1011 aa11.32□□□□□ -0.6
GAPLINC-203ENST00000581029 CSF1RP07333 972 aa11.32□□□□□ -0.6
GAPLINC-203ENST00000581029 CTSWP56202 376 aa11.32□□□□□ -0.6
GAPLINC-203ENST00000581029 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
GAPLINC-203ENST00000581029 POLA2Q14181 598 aa11.32□□□□□ -0.6
GAPLINC-203ENST00000581029 SF3B3Q15393 1217 aaKnown RBP11.32□□□□□ -0.6
GAPLINC-203ENST00000581029 SMC5Q8IY18 1101 aa11.32□□□□□ -0.6
GAPLINC-203ENST00000581029 CDC5LQ99459 802 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms