RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 JDP2Q8WYK2 163 aa17.74■□□□□ 0.43
PGAP3-207ENST00000580898 L3MBTL3Q96JM7 780 aaPredicted RBP17.74■□□□□ 0.43
PGAP3-207ENST00000580898 NLRP3Q96P20 1036 aa17.74■□□□□ 0.43
PGAP3-207ENST00000580898 PSMD1Q99460 953 aa17.74■□□□□ 0.43
PGAP3-207ENST00000580898 HOXA10P31260 410 aaPredicted RBP17.73■□□□□ 0.43
PGAP3-207ENST00000580898 SYNE4Q8N205 404 aa17.73■□□□□ 0.43
PGAP3-207ENST00000580898 JMYQ8N9B5 988 aa17.73■□□□□ 0.43
PGAP3-207ENST00000580898 CRAMP1Q96RY5 1269 aa17.73■□□□□ 0.43
PGAP3-207ENST00000580898 UTP14AQ9BVJ6 771 aaKnown RBP17.73■□□□□ 0.43
PGAP3-207ENST00000580898 LAS1LQ9Y4W2 734 aaKnown RBP17.73■□□□□ 0.43
PGAP3-207ENST00000580898 PDIA6Q15084 440 aa17.72■□□□□ 0.43
PGAP3-207ENST00000580898 CHL1O00533 1208 aa17.71■□□□□ 0.43
PGAP3-207ENST00000580898 PPEF1O14829 653 aaPredicted RBP17.71■□□□□ 0.43
PGAP3-207ENST00000580898 HOXB7P09629 217 aa17.71■□□□□ 0.43
PGAP3-207ENST00000580898 LRP10Q7Z4F1 713 aa17.71■□□□□ 0.43
PGAP3-207ENST00000580898 LDHDQ86WU2 507 aa17.71■□□□□ 0.43
PGAP3-207ENST00000580898 DDX21Q9NR30 783 aaKnown RBP eCLIP17.71■□□□□ 0.43
PGAP3-207ENST00000580898 HACL1Q9UJ83 578 aa17.71■□□□□ 0.43
PGAP3-207ENST00000580898 EIF6P56537 245 aaKnown RBP17.7■□□□□ 0.42
PGAP3-207ENST00000580898 AIMP1Q12904 312 aaKnown RBP17.7■□□□□ 0.42
PGAP3-207ENST00000580898 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
PGAP3-207ENST00000580898 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
PGAP3-207ENST00000580898 NECTIN2Q92692 538 aa17.7■□□□□ 0.42
PGAP3-207ENST00000580898 SCN4AP35499 1836 aa17.7■□□□□ 0.42
PGAP3-207ENST00000580898 FZD9O00144 591 aa17.69■□□□□ 0.42
PGAP3-207ENST00000580898 PROSER3Q2NL68 480 aa17.69■□□□□ 0.42
PGAP3-207ENST00000580898 PNMA8AQ86V59 439 aaPredicted RBP17.69■□□□□ 0.42
PGAP3-207ENST00000580898 GPC2Q8N158 579 aa17.69■□□□□ 0.42
PGAP3-207ENST00000580898 XAGE3Q8WTP9 111 aa17.69■□□□□ 0.42
PGAP3-207ENST00000580898 TAF1DQ9H5J8 278 aaPredicted RBP17.69■□□□□ 0.42
PGAP3-207ENST00000580898 ADAMTS8Q9UP79 889 aa17.69■□□□□ 0.42
PGAP3-207ENST00000580898 ZNF541Q9H0D2 1346 aa17.69■□□□□ 0.42
PGAP3-207ENST00000580898 ANXA1P04083 346 aa17.68■□□□□ 0.42
PGAP3-207ENST00000580898 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
PGAP3-207ENST00000580898 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
PGAP3-207ENST00000580898 HDGFL1Q5TGJ6 251 aa17.68■□□□□ 0.42
PGAP3-207ENST00000580898 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
PGAP3-207ENST00000580898 CREBZFQ9NS37 354 aa17.68■□□□□ 0.42
PGAP3-207ENST00000580898 TRIM35Q9UPQ4 493 aa17.68■□□□□ 0.42
PGAP3-207ENST00000580898 SNED1Q8TER0 1413 aa17.67■□□□□ 0.42
PGAP3-207ENST00000580898 TCIRG1Q13488 830 aa17.67■□□□□ 0.42
PGAP3-207ENST00000580898 EAPPQ56P03 285 aaPredicted RBP17.67■□□□□ 0.42
PGAP3-207ENST00000580898 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
PGAP3-207ENST00000580898 SUPT20HQ8NEM7 779 aa17.67■□□□□ 0.42
PGAP3-207ENST00000580898 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
PGAP3-207ENST00000580898 VPS33BQ9H267 617 aa17.67■□□□□ 0.42
PGAP3-207ENST00000580898 DBF4Q9UBU7 674 aaPredicted RBP17.67■□□□□ 0.42
PGAP3-207ENST00000580898 LMOD1P29536 600 aaPredicted RBP17.66■□□□□ 0.42
PGAP3-207ENST00000580898 EPHX2P34913 555 aa17.66■□□□□ 0.42
PGAP3-207ENST00000580898 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
PGAP3-207ENST00000580898 CHPF2Q9P2E5 772 aa17.66■□□□□ 0.42
PGAP3-207ENST00000580898 TRMT112Q9UI30 125 aaKnown RBP17.66■□□□□ 0.42
PGAP3-207ENST00000580898 CLEC11AQ9Y240 323 aa17.66■□□□□ 0.42
PGAP3-207ENST00000580898 SH3TC1Q8TE82 1336 aa17.66■□□□□ 0.42
PGAP3-207ENST00000580898 TCERG1O14776 1098 aaKnown RBP17.65■□□□□ 0.42
PGAP3-207ENST00000580898 BBOX1O75936 387 aa17.65■□□□□ 0.42
PGAP3-207ENST00000580898 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
PGAP3-207ENST00000580898 POTEJP0CG39 1038 aa17.65■□□□□ 0.42
PGAP3-207ENST00000580898 DDX46Q7L014 1031 aaKnown RBP17.65■□□□□ 0.42
PGAP3-207ENST00000580898 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
PGAP3-207ENST00000580898 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
PGAP3-207ENST00000580898 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
PGAP3-207ENST00000580898 ATP6V0A2Q9Y487 856 aa17.65■□□□□ 0.42
PGAP3-207ENST00000580898 ANKRD36CQ5JPF3 1778 aa17.65■□□□□ 0.42
PGAP3-207ENST00000580898 CHMP4AQ9BY43 222 aa17.64■□□□□ 0.41
PGAP3-207ENST00000580898 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
PGAP3-207ENST00000580898 PPIP5K2O43314 1243 aa17.63■□□□□ 0.41
PGAP3-207ENST00000580898 KRT24Q2M2I5 525 aa17.63■□□□□ 0.41
PGAP3-207ENST00000580898 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
PGAP3-207ENST00000580898 C3orf67Q6ZVT6 689 aa17.63■□□□□ 0.41
PGAP3-207ENST00000580898 TMC4Q7Z404 712 aa17.63■□□□□ 0.41
PGAP3-207ENST00000580898 ABCC4O15439 1325 aa17.63■□□□□ 0.41
PGAP3-207ENST00000580898 GNAI1P63096 354 aa17.62■□□□□ 0.41
PGAP3-207ENST00000580898 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
PGAP3-207ENST00000580898 PASKQ96RG2 1323 aa17.62■□□□□ 0.41
PGAP3-207ENST00000580898 HCLS1P14317 486 aaPredicted RBP17.61■□□□□ 0.41
PGAP3-207ENST00000580898 GRAPQ13588 217 aa17.61■□□□□ 0.41
PGAP3-207ENST00000580898 DPP8Q6V1X1 898 aaPredicted RBP17.61■□□□□ 0.41
PGAP3-207ENST00000580898 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
PGAP3-207ENST00000580898 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
PGAP3-207ENST00000580898 IFT57Q9NWB7 429 aa17.61■□□□□ 0.41
PGAP3-207ENST00000580898 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
PGAP3-207ENST00000580898 HSP90B1P14625 803 aaKnown RBP17.6■□□□□ 0.41
PGAP3-207ENST00000580898 AOC3Q16853 763 aa17.6■□□□□ 0.41
PGAP3-207ENST00000580898 MPNDQ8N594 471 aa17.6■□□□□ 0.41
PGAP3-207ENST00000580898 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
PGAP3-207ENST00000580898 APAF1O14727 1248 aa17.59■□□□□ 0.41
PGAP3-207ENST00000580898 HSPA1AP0DMV8 641 aaKnown RBP17.59■□□□□ 0.41
PGAP3-207ENST00000580898 HSPA1BP0DMV9 641 aaKnown RBP17.59■□□□□ 0.41
PGAP3-207ENST00000580898 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
PGAP3-207ENST00000580898 CNTROBQ8N137 903 aa17.59■□□□□ 0.41
PGAP3-207ENST00000580898 RTFDC1Q9BY42 306 aaPredicted RBP17.59■□□□□ 0.41
PGAP3-207ENST00000580898 MKRN1Q9UHC7 482 aaKnown RBP17.59■□□□□ 0.41
PGAP3-207ENST00000580898 CNTNAP1P78357 1384 aa17.58■□□□□ 0.4
PGAP3-207ENST00000580898 ITGBL1O95965 494 aaPredicted RBP17.58■□□□□ 0.4
PGAP3-207ENST00000580898 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.4
PGAP3-207ENST00000580898 ZNRF3Q9ULT6 936 aa17.58■□□□□ 0.4
PGAP3-207ENST00000580898 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
PGAP3-207ENST00000580898 USP50Q70EL3 339 aaPredicted RBP17.57■□□□□ 0.4
PGAP3-207ENST00000580898 RIC3Q7Z5B4 369 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms