RNA–Protein interactions for RNA: ENST00000580263.5

ACADVL-223, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-223	ENST00000580263	TCIRG1	Q13488	830 aa		28.19	■■■□□ 2.1
ACADVL-223	ENST00000580263	PLBD2	Q8NHP8	589 aa		28.19	■■■□□ 2.1
ACADVL-223	ENST00000580263	IL16	Q14005	1332 aa		28.18	■■■□□ 2.1
ACADVL-223	ENST00000580263	NLRP10	Q86W26	655 aa		28.18	■■■□□ 2.1
ACADVL-223	ENST00000580263	CRY2	Q49AN0	593 aa		28.17	■■■□□ 2.1
ACADVL-223	ENST00000580263	ANKRD13D	Q6ZTN6	518 aa		28.17	■■■□□ 2.1
ACADVL-223	ENST00000580263	UTP14A	Q9BVJ6	771 aa	Known RBP	28.17	■■■□□ 2.1
ACADVL-223	ENST00000580263	PHAX	Q9H814	394 aa	Known RBP	28.17	■■■□□ 2.1
ACADVL-223	ENST00000580263	LMNB1	P20700	586 aa		28.16	■■■□□ 2.1
ACADVL-223	ENST00000580263	C3orf67	Q6ZVT6	689 aa		28.16	■■■□□ 2.1
ACADVL-223	ENST00000580263	ZNF428	Q96B54	188 aa		28.16	■■■□□ 2.1
ACADVL-223	ENST00000580263	C7orf43	Q8WVR3	580 aa		28.15	■■■□□ 2.1
ACADVL-223	ENST00000580263	DDX60	Q8IY21	1712 aa	Known RBP	28.15	■■■□□ 2.1
ACADVL-223	ENST00000580263	C1QTNF8	P60827	252 aa		28.14	■■■□□ 2.1
ACADVL-223	ENST00000580263	CCDC30	Q5VVM6	783 aa		28.13	■■■□□ 2.09
ACADVL-223	ENST00000580263	OLFM4	Q6UX06	510 aa		28.13	■■■□□ 2.09
ACADVL-223	ENST00000580263	SYNE4	Q8N205	404 aa		28.13	■■■□□ 2.09
ACADVL-223	ENST00000580263	FANCI	Q9NVI1	1328 aa		28.13	■■■□□ 2.09
ACADVL-223	ENST00000580263	ATP5J2-PTCD1	G3V325	749 aa		28.12	■■■□□ 2.09
ACADVL-223	ENST00000580263	WDR63	Q8IWG1	891 aa		28.12	■■■□□ 2.09
ACADVL-223	ENST00000580263	RPGR	Q92834	1020 aa	Known RBP	28.12	■■■□□ 2.09
ACADVL-223	ENST00000580263	ISCA1	Q9BUE6	129 aa		28.12	■■■□□ 2.09
ACADVL-223	ENST00000580263	TAF1	P21675	1872 aa		28.12	■■■□□ 2.09
ACADVL-223	ENST00000580263	TCERG1	O14776	1098 aa	Known RBP	28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	ALDH1B1	P30837	517 aa		28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	TWISTNB	Q3B726	338 aa	Predicted RBP	28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	SLC10A5	Q5PT55	438 aa		28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	SOGA3	Q5TF21	947 aa		28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	TAOK3	Q9H2K8	898 aa		28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	TRMT112	Q9UI30	125 aa	Known RBP	28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	CACNA1F	O60840	1977 aa		28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	RNF123	Q5XPI4	1314 aa		28.11	■■■□□ 2.09
ACADVL-223	ENST00000580263	KIF3C	O14782	793 aa		28.1	■■■□□ 2.09
ACADVL-223	ENST00000580263	GOLGA2	Q08379	1002 aa		28.1	■■■□□ 2.09
ACADVL-223	ENST00000580263	CCDC93	Q567U6	631 aa		28.1	■■■□□ 2.09
ACADVL-223	ENST00000580263	NMRK2	Q9NPI5	230 aa		28.1	■■■□□ 2.09
ACADVL-223	ENST00000580263	LTBP3	Q9NS15	1303 aa		28.1	■■■□□ 2.09
ACADVL-223	ENST00000580263	HOXA10	P31260	410 aa	Predicted RBP	28.09	■■■□□ 2.09
ACADVL-223	ENST00000580263	RIC3	Q7Z5B4	369 aa		28.09	■■■□□ 2.09
ACADVL-223	ENST00000580263	NLRP3	Q96P20	1036 aa		28.09	■■■□□ 2.09
ACADVL-223	ENST00000580263	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.09	■■■□□ 2.09
ACADVL-223	ENST00000580263	HCLS1	P14317	486 aa	Predicted RBP	28.08	■■■□□ 2.09
ACADVL-223	ENST00000580263	SH3TC1	Q8TE82	1336 aa		28.08	■■■□□ 2.09
ACADVL-223	ENST00000580263	CHMP4A	Q9BY43	222 aa		28.07	■■■□□ 2.08
ACADVL-223	ENST00000580263	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.07	■■■□□ 2.08
ACADVL-223	ENST00000580263	SLC51A	Q86UW1	340 aa		28.06	■■■□□ 2.08
ACADVL-223	ENST00000580263	RBM17	Q96I25	401 aa	Known RBP	28.06	■■■□□ 2.08
ACADVL-223	ENST00000580263	SNED1	Q8TER0	1413 aa		28.05	■■■□□ 2.08
ACADVL-223	ENST00000580263	CRAMP1	Q96RY5	1269 aa		28.05	■■■□□ 2.08
ACADVL-223	ENST00000580263	KDM2B	Q8NHM5	1336 aa		28.04	■■■□□ 2.08
ACADVL-223	ENST00000580263	EXOSC9	Q06265	439 aa	Known RBP	28.04	■■■□□ 2.08
ACADVL-223	ENST00000580263	MYD88	Q99836	296 aa		28.04	■■■□□ 2.08
ACADVL-223	ENST00000580263	STK31	Q9BXU1	1019 aa		28.04	■■■□□ 2.08
ACADVL-223	ENST00000580263	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.03	■■■□□ 2.08
ACADVL-223	ENST00000580263	TRIM28	Q13263	835 aa	Known RBP	28.03	■■■□□ 2.08
ACADVL-223	ENST00000580263	FAM89A	Q96GI7	184 aa		28.03	■■■□□ 2.08
ACADVL-223	ENST00000580263	RTL5	Q5HYW3	569 aa	Predicted RBP	28.02	■■■□□ 2.08
ACADVL-223	ENST00000580263	G2E3	Q7L622	706 aa		28.02	■■■□□ 2.08
ACADVL-223	ENST00000580263	ABCC4	O15439	1325 aa		28.01	■■■□□ 2.07
ACADVL-223	ENST00000580263	PPEF1	O14829	653 aa	Predicted RBP	28.01	■■■□□ 2.07
ACADVL-223	ENST00000580263	DDX58	O95786	925 aa	Known RBP	28.01	■■■□□ 2.07
ACADVL-223	ENST00000580263	RTKN2	Q8IZC4	609 aa		28.01	■■■□□ 2.07
ACADVL-223	ENST00000580263	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.01	■■■□□ 2.07
ACADVL-223	ENST00000580263	ZNF521	Q96K83	1311 aa		28	■■■□□ 2.07
ACADVL-223	ENST00000580263	GLTPD2	A6NH11	291 aa		28	■■■□□ 2.07
ACADVL-223	ENST00000580263	VAMP4	O75379	141 aa		28	■■■□□ 2.07
ACADVL-223	ENST00000580263	MAP3K2	Q9Y2U5	619 aa		28	■■■□□ 2.07
ACADVL-223	ENST00000580263	SLC4A2	P04920	1241 aa		27.99	■■■□□ 2.07
ACADVL-223	ENST00000580263	METTL22	Q9BUU2	404 aa	Predicted RBP	27.99	■■■□□ 2.07
ACADVL-223	ENST00000580263	RRAGC	Q9HB90	399 aa		27.99	■■■□□ 2.07
ACADVL-223	ENST00000580263	PI4KAP2	A4QPH2	592 aa		27.97	■■■□□ 2.07
ACADVL-223	ENST00000580263	CC2D2B	Q6DHV5	1058 aa		27.97	■■■□□ 2.07
ACADVL-223	ENST00000580263	KSR2	Q6VAB6	950 aa		27.97	■■■□□ 2.07
ACADVL-223	ENST00000580263	PI4KAP1	Q8N8J0	262 aa		27.97	■■■□□ 2.07
ACADVL-223	ENST00000580263	MYH16	Q9H6N6	1097 aa		27.97	■■■□□ 2.07
ACADVL-223	ENST00000580263	WDR90	Q96KV7	1748 aa		27.97	■■■□□ 2.07
ACADVL-223	ENST00000580263	COL4A1	P02462	1669 aa		27.97	■■■□□ 2.07
ACADVL-223	ENST00000580263	CCER2	I3L3R5	266 aa		27.96	■■■□□ 2.07
ACADVL-223	ENST00000580263	IRS4	O14654	1257 aa	Predicted RBP	27.95	■■■□□ 2.06
ACADVL-223	ENST00000580263	DDX46	Q7L014	1031 aa	Known RBP	27.95	■■■□□ 2.06
ACADVL-223	ENST00000580263	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.95	■■■□□ 2.06
ACADVL-223	ENST00000580263	CCDC191	Q8NCU4	936 aa		27.95	■■■□□ 2.06
ACADVL-223	ENST00000580263	JARID2	Q92833	1246 aa	Predicted RBP	27.95	■■■□□ 2.06
ACADVL-223	ENST00000580263	PSMD1	Q99460	953 aa		27.95	■■■□□ 2.06
ACADVL-223	ENST00000580263	IARS	P41252	1262 aa	Known RBP	27.94	■■■□□ 2.06
ACADVL-223	ENST00000580263	CWC25	Q9NXE8	425 aa	Predicted RBP	27.94	■■■□□ 2.06
ACADVL-223	ENST00000580263	ATP6V0A2	Q9Y487	856 aa		27.94	■■■□□ 2.06
ACADVL-223	ENST00000580263	MYH3	P11055	1940 aa		27.94	■■■□□ 2.06
ACADVL-223	ENST00000580263	COL4A5	P29400	1685 aa		27.94	■■■□□ 2.06
ACADVL-223	ENST00000580263	LRRC37A	A6NMS7	1700 aa		27.93	■■■□□ 2.06
ACADVL-223	ENST00000580263	TOMM70	O94826	608 aa		27.93	■■■□□ 2.06
ACADVL-223	ENST00000580263	FLII	Q13045	1269 aa		27.93	■■■□□ 2.06
ACADVL-223	ENST00000580263	IGKV5-2	P06315	115 aa		27.92	■■■□□ 2.06
ACADVL-223	ENST00000580263	GRAP	Q13588	217 aa		27.92	■■■□□ 2.06
ACADVL-223	ENST00000580263	SF3B3	Q15393	1217 aa	Known RBP	27.92	■■■□□ 2.06
ACADVL-223	ENST00000580263	DPY19L2	Q6NUT2	758 aa		27.92	■■■□□ 2.06
ACADVL-223	ENST00000580263	GRAPL	Q8TC17	118 aa	Predicted RBP	27.92	■■■□□ 2.06
ACADVL-223	ENST00000580263	PCCA	P05165	728 aa	Predicted RBP	27.91	■■■□□ 2.06
ACADVL-223	ENST00000580263	BBOX1	O75936	387 aa		27.9	■■■□□ 2.06
ACADVL-223	ENST00000580263	DDN	O94850	711 aa	Predicted RBP	27.9	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms