RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
GGA3-208ENST00000579743 CRAMP1Q96RY5 1269 aa17.86■□□□□ 0.45
GGA3-208ENST00000579743 PSMD1Q99460 953 aa17.86■□□□□ 0.45
GGA3-208ENST00000579743 DDX21Q9NR30 783 aaKnown RBP eCLIP17.86■□□□□ 0.45
GGA3-208ENST00000579743 HOXB7P09629 217 aa17.85■□□□□ 0.45
GGA3-208ENST00000579743 CHADLQ6NUI6 762 aa17.85■□□□□ 0.45
GGA3-208ENST00000579743 UBN2Q6ZU65 1347 aa17.85■□□□□ 0.45
GGA3-208ENST00000579743 NECTIN2Q92692 538 aa17.85■□□□□ 0.45
GGA3-208ENST00000579743 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
GGA3-208ENST00000579743 ABCC12Q96J65 1359 aa17.84■□□□□ 0.45
GGA3-208ENST00000579743 POTECB2RU33 542 aa17.84■□□□□ 0.45
GGA3-208ENST00000579743 NTSR2O95665 410 aa17.84■□□□□ 0.45
GGA3-208ENST00000579743 EIF6P56537 245 aaKnown RBP17.84■□□□□ 0.45
GGA3-208ENST00000579743 PDIA6Q15084 440 aa17.84■□□□□ 0.45
GGA3-208ENST00000579743 COPS6Q7L5N1 327 aa17.84■□□□□ 0.45
GGA3-208ENST00000579743 CHMP4AQ9BY43 222 aa17.84■□□□□ 0.45
GGA3-208ENST00000579743 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
GGA3-208ENST00000579743 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
GGA3-208ENST00000579743 HDGFL1Q5TGJ6 251 aa17.83■□□□□ 0.44
GGA3-208ENST00000579743 XAGE3Q8WTP9 111 aa17.83■□□□□ 0.44
GGA3-208ENST00000579743 L3MBTL3Q96JM7 780 aaPredicted RBP17.83■□□□□ 0.44
GGA3-208ENST00000579743 HACL1Q9UJ83 578 aa17.83■□□□□ 0.44
GGA3-208ENST00000579743 PPEF1O14829 653 aaPredicted RBP17.82■□□□□ 0.44
GGA3-208ENST00000579743 HTRA3P83110 453 aa17.82■□□□□ 0.44
GGA3-208ENST00000579743 SLC10A5Q5PT55 438 aa17.82■□□□□ 0.44
GGA3-208ENST00000579743 PNMA8AQ86V59 439 aaPredicted RBP17.82■□□□□ 0.44
GGA3-208ENST00000579743 LDHDQ86WU2 507 aa17.82■□□□□ 0.44
GGA3-208ENST00000579743 CFAP44Q96MT7 982 aa17.82■□□□□ 0.44
GGA3-208ENST00000579743 DBF4Q9UBU7 674 aaPredicted RBP17.82■□□□□ 0.44
GGA3-208ENST00000579743 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
GGA3-208ENST00000579743 ANXA1P04083 346 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 TCIRG1Q13488 830 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 PROSER3Q2NL68 480 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 OLFM4Q6UX06 510 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 GPC2Q8N158 579 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 LARGE2Q8N3Y3 721 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 JMYQ8N9B5 988 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 SUPT20HQ8NEM7 779 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 HYPKQ9NX55 129 aa17.81■□□□□ 0.44
GGA3-208ENST00000579743 TRMT112Q9UI30 125 aaKnown RBP17.81■□□□□ 0.44
GGA3-208ENST00000579743 FZD9O00144 591 aa17.8■□□□□ 0.44
GGA3-208ENST00000579743 BBOX1O75936 387 aa17.8■□□□□ 0.44
GGA3-208ENST00000579743 LMOD1P29536 600 aaPredicted RBP17.8■□□□□ 0.44
GGA3-208ENST00000579743 EAPPQ56P03 285 aaPredicted RBP17.8■□□□□ 0.44
GGA3-208ENST00000579743 LRP10Q7Z4F1 713 aa17.8■□□□□ 0.44
GGA3-208ENST00000579743 VPS33BQ9H267 617 aa17.8■□□□□ 0.44
GGA3-208ENST00000579743 TAF1DQ9H5J8 278 aaPredicted RBP17.8■□□□□ 0.44
GGA3-208ENST00000579743 CLEC11AQ9Y240 323 aa17.8■□□□□ 0.44
GGA3-208ENST00000579743 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
GGA3-208ENST00000579743 TCERG1O14776 1098 aaKnown RBP17.79■□□□□ 0.44
GGA3-208ENST00000579743 GNAI1P63096 354 aa17.79■□□□□ 0.44
GGA3-208ENST00000579743 DDX46Q7L014 1031 aaKnown RBP17.79■□□□□ 0.44
GGA3-208ENST00000579743 NLRP10Q86W26 655 aa17.79■□□□□ 0.44
GGA3-208ENST00000579743 PLBD2Q8NHP8 589 aa17.79■□□□□ 0.44
GGA3-208ENST00000579743 CHPF2Q9P2E5 772 aa17.79■□□□□ 0.44
GGA3-208ENST00000579743 SCN4AP35499 1836 aa17.79■□□□□ 0.44
GGA3-208ENST00000579743 HSP90B1P14625 803 aaKnown RBP17.78■□□□□ 0.44
GGA3-208ENST00000579743 EPHX2P34913 555 aa17.78■□□□□ 0.44
GGA3-208ENST00000579743 DUSP27Q5VZP5 1158 aa17.78■□□□□ 0.44
GGA3-208ENST00000579743 ANKRD13DQ6ZTN6 518 aa17.78■□□□□ 0.44
GGA3-208ENST00000579743 NIM1KQ8IY84 436 aa17.78■□□□□ 0.44
GGA3-208ENST00000579743 CREBZFQ9NS37 354 aa17.78■□□□□ 0.44
GGA3-208ENST00000579743 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
GGA3-208ENST00000579743 CEP350Q5VT06 3117 aa17.78■□□□□ 0.44
GGA3-208ENST00000579743 ZNF541Q9H0D2 1346 aa17.77■□□□□ 0.44
GGA3-208ENST00000579743 TMC4Q7Z404 712 aa17.77■□□□□ 0.44
GGA3-208ENST00000579743 IFT57Q9NWB7 429 aa17.77■□□□□ 0.44
GGA3-208ENST00000579743 GJA3Q9Y6H8 435 aa17.77■□□□□ 0.44
GGA3-208ENST00000579743 APAF1O14727 1248 aa17.76■□□□□ 0.43
GGA3-208ENST00000579743 PPIP5K2O43314 1243 aa17.76■□□□□ 0.43
GGA3-208ENST00000579743 ZEB1P37275 1124 aaPredicted RBP17.76■□□□□ 0.43
GGA3-208ENST00000579743 KRT24Q2M2I5 525 aa17.76■□□□□ 0.43
GGA3-208ENST00000579743 HCLS1P14317 486 aaPredicted RBP17.75■□□□□ 0.43
GGA3-208ENST00000579743 GOLGA2Q08379 1002 aa17.75■□□□□ 0.43
GGA3-208ENST00000579743 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
GGA3-208ENST00000579743 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
GGA3-208ENST00000579743 MBIPQ9NS73 344 aa17.75■□□□□ 0.43
GGA3-208ENST00000579743 RIC3Q7Z5B4 369 aa17.74■□□□□ 0.43
GGA3-208ENST00000579743 MPNDQ8N594 471 aa17.74■□□□□ 0.43
GGA3-208ENST00000579743 ABCC4O15439 1325 aa17.73■□□□□ 0.43
GGA3-208ENST00000579743 POTEIP0CG38 1075 aa17.73■□□□□ 0.43
GGA3-208ENST00000579743 POTEJP0CG39 1038 aa17.73■□□□□ 0.43
GGA3-208ENST00000579743 GRAPQ13588 217 aa17.73■□□□□ 0.43
GGA3-208ENST00000579743 C3orf67Q6ZVT6 689 aa17.73■□□□□ 0.43
GGA3-208ENST00000579743 GRAPLQ8TC17 118 aaPredicted RBP17.73■□□□□ 0.43
GGA3-208ENST00000579743 ANKRD36CQ5JPF3 1778 aa17.73■□□□□ 0.43
GGA3-208ENST00000579743 DDX58O95786 925 aaKnown RBP17.72■□□□□ 0.43
GGA3-208ENST00000579743 TMEM88BA6NKF7 163 aa17.71■□□□□ 0.43
GGA3-208ENST00000579743 AOC3Q16853 763 aa17.71■□□□□ 0.43
GGA3-208ENST00000579743 CCDC30Q5VVM6 783 aa17.71■□□□□ 0.43
GGA3-208ENST00000579743 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
GGA3-208ENST00000579743 ZNRF3Q9ULT6 936 aa17.71■□□□□ 0.43
GGA3-208ENST00000579743 SNED1Q8TER0 1413 aa17.71■□□□□ 0.43
GGA3-208ENST00000579743 ZNF853P0CG23 659 aa17.7■□□□□ 0.42
GGA3-208ENST00000579743 TRIM28Q13263 835 aaKnown RBP17.7■□□□□ 0.42
GGA3-208ENST00000579743 TNIP1Q15025 636 aa17.7■□□□□ 0.42
GGA3-208ENST00000579743 CNTROBQ8N137 903 aa17.7■□□□□ 0.42
GGA3-208ENST00000579743 ISCA1Q9BUE6 129 aa17.7■□□□□ 0.42
GGA3-208ENST00000579743 ATP5J2-PTCD1G3V325 749 aa17.69■□□□□ 0.42
GGA3-208ENST00000579743 ELL2O00472 640 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms