RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
ITGB4-206ENST00000579662 SFPQP23246 707 aaKnown RBP eCLIP17.62■□□□□ 0.41
ITGB4-206ENST00000579662 MCM5P33992 734 aa17.62■□□□□ 0.41
ITGB4-206ENST00000579662 PDE1AP54750 535 aa17.62■□□□□ 0.41
ITGB4-206ENST00000579662 KIAA1328Q86T90 577 aa17.62■□□□□ 0.41
ITGB4-206ENST00000579662 ANKRD18AQ8IVF6 992 aa17.62■□□□□ 0.41
ITGB4-206ENST00000579662 KRT23Q9C075 422 aa17.62■□□□□ 0.41
ITGB4-206ENST00000579662 METAP2P50579 478 aaKnown RBP eCLIP17.61■□□□□ 0.41
ITGB4-206ENST00000579662 CCT2P78371 535 aaKnown RBP17.61■□□□□ 0.41
ITGB4-206ENST00000579662 ARHGAP29Q52LW3 1261 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 SNRKQ9NRH2 765 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 ATP10AO60312 1499 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 ZSCAN12O43309 604 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 BAG4O95429 457 aaKnown RBP17.61■□□□□ 0.41
ITGB4-206ENST00000579662 ANXA1P04083 346 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 POTEJP0CG39 1038 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 SKAP1Q86WV1 359 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 SEPT11Q9NVA2 429 aaKnown RBP17.61■□□□□ 0.41
ITGB4-206ENST00000579662 NPC1L1Q9UHC9 1359 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 SDSP20132 328 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 PPP4R3AQ6IN85 833 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 LINS1Q8NG48 757 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 DNAI2Q9GZS0 605 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 EIF3JO75822 258 aaKnown RBP17.61■□□□□ 0.41
ITGB4-206ENST00000579662 TRIM21P19474 475 aaKnown RBP17.61■□□□□ 0.41
ITGB4-206ENST00000579662 TAF4BQ92750 862 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 GUCY1B3Q02153 619 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 ATP2B3Q16720 1220 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 PPP4R3BQ5MIZ7 849 aa17.61■□□□□ 0.41
ITGB4-206ENST00000579662 TTC41PQ6P2S7 1318 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 ESPNB1AK53 854 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 CNNM3Q8NE01 707 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 ZSCAN16Q9H4T2 348 aaPredicted RBP17.6■□□□□ 0.41
ITGB4-206ENST00000579662 CNNM2Q9H8M5 875 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 TSPY2A6NKD2 308 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 ATP6V1AP38606 617 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 DCAF5Q96JK2 942 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 AXDND1Q5T1B0 1012 aaPredicted RBP17.6■□□□□ 0.41
ITGB4-206ENST00000579662 ZSCAN30Q86W11 494 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 FSIP1Q8NA03 581 aa17.6■□□□□ 0.41
ITGB4-206ENST00000579662 JAKMIP3Q5VZ66 844 aa17.59■□□□□ 0.41
ITGB4-206ENST00000579662 WDHD1O75717 1129 aaPredicted RBP17.59■□□□□ 0.41
ITGB4-206ENST00000579662 TMTC2Q8N394 836 aa17.59■□□□□ 0.41
ITGB4-206ENST00000579662 CCDC148Q8NFR7 591 aa17.59■□□□□ 0.41
ITGB4-206ENST00000579662 ORC3Q9UBD5 711 aaPredicted RBP17.59■□□□□ 0.41
ITGB4-206ENST00000579662 KANK3Q6NY19 840 aa17.59■□□□□ 0.41
ITGB4-206ENST00000579662 BABAM1Q9NWV8 329 aa17.59■□□□□ 0.41
ITGB4-206ENST00000579662 AMPD3Q01432 767 aa17.59■□□□□ 0.41
ITGB4-206ENST00000579662 CABP5Q9NP86 173 aa17.59■□□□□ 0.41
ITGB4-206ENST00000579662 EDC4Q6P2E9 1401 aaKnown RBP17.59■□□□□ 0.41
ITGB4-206ENST00000579662 DDB1Q16531 1140 aa17.58■□□□□ 0.41
ITGB4-206ENST00000579662 IP6K1Q92551 441 aa17.58■□□□□ 0.41
ITGB4-206ENST00000579662 SETDB2Q96T68 719 aa17.58■□□□□ 0.41
ITGB4-206ENST00000579662 ESYT1Q9BSJ8 1104 aa17.58■□□□□ 0.41
ITGB4-206ENST00000579662 NYXQ9GZU5 481 aa17.58■□□□□ 0.41
ITGB4-206ENST00000579662 CAVIN2O95810 425 aa17.58■□□□□ 0.41
ITGB4-206ENST00000579662 SPA17Q15506 151 aa17.58■□□□□ 0.41
ITGB4-206ENST00000579662 HOXC9P31274 260 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 FAM177A1Q8N128 213 aaPredicted RBP17.58■□□□□ 0.4
ITGB4-206ENST00000579662 CCDC82Q8N4S0 544 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 KRI1Q8N9T8 703 aaKnown RBP17.58■□□□□ 0.4
ITGB4-206ENST00000579662 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 SLC39A6Q13433 755 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 STX1AQ16623 288 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 MCMDC2Q4G0Z9 681 aa17.58■□□□□ 0.4
ITGB4-206ENST00000579662 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
ITGB4-206ENST00000579662 VAMP4O75379 141 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 LMBR1LQ6UX01 489 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 CALML4Q96GE6 196 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 TCP11L1Q9NUJ3 509 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 TSHZ3Q63HK5 1081 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 LEKR1Q6ZMV7 388 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 NEMFO60524 1076 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
ITGB4-206ENST00000579662 VPS36Q86VN1 386 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
ITGB4-206ENST00000579662 GCP02774 474 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 EYA1Q99502 592 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 LRRC27Q9C0I9 530 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 MPNDQ8N594 471 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 BMP15O95972 392 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 HAND2P61296 217 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 UBE2HP62256 183 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 PAF1Q8N7H5 531 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 WTAPQ15007 396 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 MICU3Q86XE3 530 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 CCDC66A2RUB6 948 aa17.56■□□□□ 0.4
ITGB4-206ENST00000579662 LRRC59Q96AG4 307 aaKnown RBP17.56■□□□□ 0.4
ITGB4-206ENST00000579662 KLHL10Q6JEL2 608 aa17.55■□□□□ 0.4
ITGB4-206ENST00000579662 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
ITGB4-206ENST00000579662 TRAF1Q13077 416 aa17.55■□□□□ 0.4
ITGB4-206ENST00000579662 ESR2Q92731 530 aa17.55■□□□□ 0.4
ITGB4-206ENST00000579662 SAMD9Q5K651 1589 aa17.55■□□□□ 0.4
ITGB4-206ENST00000579662 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
ITGB4-206ENST00000579662 CETN2P41208 172 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms