RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 RRP7AQ9Y3A4 280 aaKnown RBP12.23□□□□□ -0.45
LINC00271-204ENST00000579057 FZD9O00144 591 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 NTSR2O95665 410 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 MYL6BP14649 208 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
LINC00271-204ENST00000579057 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 RTKN2Q8IZC4 609 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 ZBTB3Q9H5J0 574 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 LAMB2P55268 1798 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 ANKRD36CQ5JPF3 1778 aa12.22□□□□□ -0.45
LINC00271-204ENST00000579057 ITGBL1O95965 494 aaPredicted RBP12.21□□□□□ -0.45
LINC00271-204ENST00000579057 HSPA1AP0DMV8 641 aaKnown RBP12.21□□□□□ -0.45
LINC00271-204ENST00000579057 HSPA1BP0DMV9 641 aaKnown RBP12.21□□□□□ -0.45
LINC00271-204ENST00000579057 GPTP24298 496 aa12.21□□□□□ -0.45
LINC00271-204ENST00000579057 ALDH1B1P30837 517 aa12.21□□□□□ -0.45
LINC00271-204ENST00000579057 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
LINC00271-204ENST00000579057 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
LINC00271-204ENST00000579057 LDHDQ86WU2 507 aa12.21□□□□□ -0.45
LINC00271-204ENST00000579057 PSMD1Q99460 953 aa12.21□□□□□ -0.45
LINC00271-204ENST00000579057 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
LINC00271-204ENST00000579057 ERBB4Q15303 1308 aa12.2□□□□□ -0.46
LINC00271-204ENST00000579057 IQCA1LA6NCM1 817 aa12.2□□□□□ -0.46
LINC00271-204ENST00000579057 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
LINC00271-204ENST00000579057 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
LINC00271-204ENST00000579057 MAPK8IP3Q9UPT6 1336 aa12.19□□□□□ -0.46
LINC00271-204ENST00000579057 NEFMP07197 916 aa12.19□□□□□ -0.46
LINC00271-204ENST00000579057 GTF2E1P29083 439 aaPredicted RBP12.19□□□□□ -0.46
LINC00271-204ENST00000579057 KIF6Q6ZMV9 814 aa12.19□□□□□ -0.46
LINC00271-204ENST00000579057 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
LINC00271-204ENST00000579057 TAF1P21675 1872 aa12.19□□□□□ -0.46
LINC00271-204ENST00000579057 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
LINC00271-204ENST00000579057 ANXA1P04083 346 aa12.18□□□□□ -0.46
LINC00271-204ENST00000579057 RIPK4P57078 832 aa12.18□□□□□ -0.46
LINC00271-204ENST00000579057 CRAMP1Q96RY5 1269 aa12.18□□□□□ -0.46
LINC00271-204ENST00000579057 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
LINC00271-204ENST00000579057 HACL1Q9UJ83 578 aa12.18□□□□□ -0.46
LINC00271-204ENST00000579057 EPHX2P34913 555 aa12.17□□□□□ -0.46
LINC00271-204ENST00000579057 TMPOP42166 694 aaKnown RBP12.17□□□□□ -0.46
LINC00271-204ENST00000579057 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
LINC00271-204ENST00000579057 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
LINC00271-204ENST00000579057 GPC2Q8N158 579 aa12.17□□□□□ -0.46
LINC00271-204ENST00000579057 EIF2S2P20042 333 aaKnown RBP12.16□□□□□ -0.46
LINC00271-204ENST00000579057 RALBP1Q15311 655 aa12.16□□□□□ -0.46
LINC00271-204ENST00000579057 KRT24Q2M2I5 525 aa12.16□□□□□ -0.46
LINC00271-204ENST00000579057 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
LINC00271-204ENST00000579057 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
LINC00271-204ENST00000579057 RPGRQ92834 1020 aaKnown RBP12.16□□□□□ -0.46
LINC00271-204ENST00000579057 PNNQ9H307 717 aaKnown RBP12.16□□□□□ -0.46
LINC00271-204ENST00000579057 BABAM1Q9NWV8 329 aa12.16□□□□□ -0.46
LINC00271-204ENST00000579057 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
LINC00271-204ENST00000579057 SCNN1DP51172 638 aa12.15□□□□□ -0.46
LINC00271-204ENST00000579057 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
LINC00271-204ENST00000579057 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
LINC00271-204ENST00000579057 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.46
LINC00271-204ENST00000579057 TRIM35Q9UPQ4 493 aa12.15□□□□□ -0.46
LINC00271-204ENST00000579057 COL4A1P02462 1669 aa12.15□□□□□ -0.46
LINC00271-204ENST00000579057 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
LINC00271-204ENST00000579057 ABCC4O15439 1325 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 TMEM88BA6NKF7 163 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 CHL1O00533 1208 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 VEGFBP49765 207 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 PPP1R42Q7Z4L9 355 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 PNMA8AQ86V59 439 aaPredicted RBP12.14□□□□□ -0.47
LINC00271-204ENST00000579057 NLRP10Q86W26 655 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 CNTROBQ8N137 903 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 ATP6V0A2Q9Y487 856 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
LINC00271-204ENST00000579057 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
LINC00271-204ENST00000579057 FOXN1O15353 648 aa12.13□□□□□ -0.47
LINC00271-204ENST00000579057 EPS15P42566 896 aa12.13□□□□□ -0.47
LINC00271-204ENST00000579057 FMR1Q06787 632 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC00271-204ENST00000579057 GRIPAP1Q4V328 841 aa12.13□□□□□ -0.47
LINC00271-204ENST00000579057 COPS6Q7L5N1 327 aa12.13□□□□□ -0.47
LINC00271-204ENST00000579057 CCDC146Q8IYE0 955 aa12.13□□□□□ -0.47
LINC00271-204ENST00000579057 SP7Q8TDD2 431 aaPredicted RBP12.13□□□□□ -0.47
LINC00271-204ENST00000579057 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
LINC00271-204ENST00000579057 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
LINC00271-204ENST00000579057 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
LINC00271-204ENST00000579057 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
LINC00271-204ENST00000579057 GJA3Q9Y6H8 435 aa12.13□□□□□ -0.47
LINC00271-204ENST00000579057 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
LINC00271-204ENST00000579057 THSD7BQ9C0I4 1608 aa12.12□□□□□ -0.47
LINC00271-204ENST00000579057 RASSF10A6NK89 507 aa12.12□□□□□ -0.47
LINC00271-204ENST00000579057 HCLS1P14317 486 aaPredicted RBP12.12□□□□□ -0.47
LINC00271-204ENST00000579057 EIF6P56537 245 aaKnown RBP12.12□□□□□ -0.47
LINC00271-204ENST00000579057 LARGE2Q8N3Y3 721 aa12.12□□□□□ -0.47
LINC00271-204ENST00000579057 NLRP3Q96P20 1036 aa12.12□□□□□ -0.47
LINC00271-204ENST00000579057 DDX21Q9NR30 783 aaKnown RBP eCLIP12.12□□□□□ -0.47
LINC00271-204ENST00000579057 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
LINC00271-204ENST00000579057 LMOD3Q0VAK6 560 aa12.11□□□□□ -0.47
LINC00271-204ENST00000579057 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
LINC00271-204ENST00000579057 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
LINC00271-204ENST00000579057 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
LINC00271-204ENST00000579057 AOC3Q16853 763 aa12.11□□□□□ -0.47
LINC00271-204ENST00000579057 PPIP5K2O43314 1243 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms