RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 DUSP27Q5VZP5 1158 aa26.46■■□□□ 1.83
LIMD2-206ENST00000578993 RBM46Q8TBY0 533 aaKnown RBP26.46■■□□□ 1.83
LIMD2-206ENST00000578993 PARP10Q53GL7 1025 aa26.45■■□□□ 1.82
LIMD2-206ENST00000578993 CCDC93Q567U6 631 aa26.45■■□□□ 1.82
LIMD2-206ENST00000578993 IFT57Q9NWB7 429 aa26.45■■□□□ 1.82
LIMD2-206ENST00000578993 POTECB2RU33 542 aa26.44■■□□□ 1.82
LIMD2-206ENST00000578993 ALDH1B1P30837 517 aa26.44■■□□□ 1.82
LIMD2-206ENST00000578993 HOXA10P31260 410 aaPredicted RBP26.44■■□□□ 1.82
LIMD2-206ENST00000578993 PPP1R42Q7Z4L9 355 aa26.44■■□□□ 1.82
LIMD2-206ENST00000578993 SLC51AQ86UW1 340 aa26.44■■□□□ 1.82
LIMD2-206ENST00000578993 TCIRG1Q13488 830 aa26.42■■□□□ 1.82
LIMD2-206ENST00000578993 NLRP10Q86W26 655 aa26.42■■□□□ 1.82
LIMD2-206ENST00000578993 UTP14AQ9BVJ6 771 aaKnown RBP26.42■■□□□ 1.82
LIMD2-206ENST00000578993 TAF1P21675 1872 aa26.42■■□□□ 1.82
LIMD2-206ENST00000578993 FKBP4Q02790 459 aaKnown RBP eCLIP26.41■■□□□ 1.82
LIMD2-206ENST00000578993 SLC10A5Q5PT55 438 aa26.41■■□□□ 1.82
LIMD2-206ENST00000578993 C16orf71Q8IYS4 520 aaPredicted RBP26.41■■□□□ 1.82
LIMD2-206ENST00000578993 SYNE4Q8N205 404 aa26.41■■□□□ 1.82
LIMD2-206ENST00000578993 DBF4Q9UBU7 674 aaPredicted RBP26.41■■□□□ 1.82
LIMD2-206ENST00000578993 DDX60Q8IY21 1712 aaKnown RBP26.41■■□□□ 1.82
LIMD2-206ENST00000578993 GNAI1P63096 354 aa26.4■■□□□ 1.82
LIMD2-206ENST00000578993 RPGRQ92834 1020 aaKnown RBP26.4■■□□□ 1.82
LIMD2-206ENST00000578993 ZNF277Q9NRM2 450 aaPredicted RBP26.4■■□□□ 1.82
LIMD2-206ENST00000578993 VEGFAP15692 232 aaPredicted RBP26.39■■□□□ 1.82
LIMD2-206ENST00000578993 HSP90AB3PQ58FF7 597 aa26.39■■□□□ 1.82
LIMD2-206ENST00000578993 RTKN2Q8IZC4 609 aa26.39■■□□□ 1.82
LIMD2-206ENST00000578993 ELL2O00472 640 aaPredicted RBP26.38■■□□□ 1.81
LIMD2-206ENST00000578993 CALD1Q05682 793 aaKnown RBP26.38■■□□□ 1.81
LIMD2-206ENST00000578993 C8orf58Q8NAV2 365 aa26.38■■□□□ 1.81
LIMD2-206ENST00000578993 PLBD2Q8NHP8 589 aa26.38■■□□□ 1.81
LIMD2-206ENST00000578993 ZNF428Q96B54 188 aa26.38■■□□□ 1.81
LIMD2-206ENST00000578993 CRAMP1Q96RY5 1269 aa26.38■■□□□ 1.81
LIMD2-206ENST00000578993 COL4A5P29400 1685 aa26.38■■□□□ 1.81
LIMD2-206ENST00000578993 DPY19L2Q6NUT2 758 aa26.37■■□□□ 1.81
LIMD2-206ENST00000578993 ANKRD13DQ6ZTN6 518 aa26.37■■□□□ 1.81
LIMD2-206ENST00000578993 DDNO94850 711 aaPredicted RBP26.36■■□□□ 1.81
LIMD2-206ENST00000578993 FSTL1Q12841 308 aa26.36■■□□□ 1.81
LIMD2-206ENST00000578993 RBM17Q96I25 401 aaKnown RBP26.36■■□□□ 1.81
LIMD2-206ENST00000578993 NLRP3Q96P20 1036 aa26.36■■□□□ 1.81
LIMD2-206ENST00000578993 HYPKQ9NX55 129 aa26.36■■□□□ 1.81
LIMD2-206ENST00000578993 RNF123Q5XPI4 1314 aa26.36■■□□□ 1.81
LIMD2-206ENST00000578993 HCLS1P14317 486 aaPredicted RBP26.35■■□□□ 1.81
LIMD2-206ENST00000578993 ISCA1Q9BUE6 129 aa26.35■■□□□ 1.81
LIMD2-206ENST00000578993 MRS2Q9HD23 443 aa26.35■■□□□ 1.81
LIMD2-206ENST00000578993 APLP1P51693 650 aa26.34■■□□□ 1.81
LIMD2-206ENST00000578993 PSMD1Q99460 953 aa26.34■■□□□ 1.81
LIMD2-206ENST00000578993 TRMT112Q9UI30 125 aaKnown RBP26.34■■□□□ 1.81
LIMD2-206ENST00000578993 SCN4AP35499 1836 aa26.33■■□□□ 1.81
LIMD2-206ENST00000578993 ANP32CO43423 234 aa26.33■■□□□ 1.81
LIMD2-206ENST00000578993 CCDC27Q2M243 656 aa26.33■■□□□ 1.81
LIMD2-206ENST00000578993 TSPYL6Q8N831 410 aa26.33■■□□□ 1.81
LIMD2-206ENST00000578993 PHAXQ9H814 394 aaKnown RBP26.33■■□□□ 1.81
LIMD2-206ENST00000578993 ABCC4O15439 1325 aa26.33■■□□□ 1.81
LIMD2-206ENST00000578993 ZNF541Q9H0D2 1346 aa26.33■■□□□ 1.81
LIMD2-206ENST00000578993 ATP5J2-PTCD1G3V325 749 aa26.32■■□□□ 1.8
LIMD2-206ENST00000578993 TCERG1O14776 1098 aaKnown RBP26.32■■□□□ 1.8
LIMD2-206ENST00000578993 PPEF1O14829 653 aaPredicted RBP26.32■■□□□ 1.8
LIMD2-206ENST00000578993 IARSP41252 1262 aaKnown RBP26.32■■□□□ 1.8
LIMD2-206ENST00000578993 CC2D2BQ6DHV5 1058 aa26.32■■□□□ 1.8
LIMD2-206ENST00000578993 WWC1Q8IX03 1113 aa26.32■■□□□ 1.8
LIMD2-206ENST00000578993 TSR2Q969E8 191 aaKnown RBP26.32■■□□□ 1.8
LIMD2-206ENST00000578993 SH3TC1Q8TE82 1336 aa26.32■■□□□ 1.8
LIMD2-206ENST00000578993 SMC1BQ8NDV3 1235 aa26.31■■□□□ 1.8
LIMD2-206ENST00000578993 DNAJC5GQ8N7S2 189 aa26.3■■□□□ 1.8
LIMD2-206ENST00000578993 COL4A1P02462 1669 aa26.3■■□□□ 1.8
LIMD2-206ENST00000578993 FZD9O00144 591 aa26.29■■□□□ 1.8
LIMD2-206ENST00000578993 HTRA3P83110 453 aa26.29■■□□□ 1.8
LIMD2-206ENST00000578993 L3MBTL3Q96JM7 780 aaPredicted RBP26.28■■□□□ 1.8
LIMD2-206ENST00000578993 POTEIP0CG38 1075 aa26.27■■□□□ 1.8
LIMD2-206ENST00000578993 POTEJP0CG39 1038 aa26.27■■□□□ 1.8
LIMD2-206ENST00000578993 FAM89AQ96GI7 184 aa26.27■■□□□ 1.8
LIMD2-206ENST00000578993 ATP6V0A2Q9Y487 856 aa26.27■■□□□ 1.8
LIMD2-206ENST00000578993 LRRC37AA6NMS7 1700 aa26.27■■□□□ 1.8
LIMD2-206ENST00000578993 TRIM28Q13263 835 aaKnown RBP26.26■■□□□ 1.79
LIMD2-206ENST00000578993 GRIPAP1Q4V328 841 aa26.25■■□□□ 1.79
LIMD2-206ENST00000578993 NCBP3Q53F19 620 aaKnown RBP26.25■■□□□ 1.79
LIMD2-206ENST00000578993 RIC3Q7Z5B4 369 aa26.24■■□□□ 1.79
LIMD2-206ENST00000578993 ADAMTSL1Q8N6G6 1762 aa26.23■■□□□ 1.79
LIMD2-206ENST00000578993 LTBP1Q14766 1721 aa26.23■■□□□ 1.79
LIMD2-206ENST00000578993 IL16Q14005 1332 aa26.23■■□□□ 1.79
LIMD2-206ENST00000578993 GOLGA2Q08379 1002 aa26.23■■□□□ 1.79
LIMD2-206ENST00000578993 RTL5Q5HYW3 569 aaPredicted RBP26.23■■□□□ 1.79
LIMD2-206ENST00000578993 CCDC30Q5VVM6 783 aa26.23■■□□□ 1.79
LIMD2-206ENST00000578993 DUOX1Q9NRD9 1551 aa26.22■■□□□ 1.79
LIMD2-206ENST00000578993 BBOX1O75936 387 aa26.22■■□□□ 1.79
LIMD2-206ENST00000578993 GRAPQ13588 217 aa26.22■■□□□ 1.79
LIMD2-206ENST00000578993 GRAPLQ8TC17 118 aaPredicted RBP26.22■■□□□ 1.79
LIMD2-206ENST00000578993 DDX46Q7L014 1031 aaKnown RBP26.21■■□□□ 1.79
LIMD2-206ENST00000578993 SP8Q8IXZ3 490 aa26.21■■□□□ 1.79
LIMD2-206ENST00000578993 MYD88Q99836 296 aa26.21■■□□□ 1.79
LIMD2-206ENST00000578993 TAF1DQ9H5J8 278 aaPredicted RBP26.21■■□□□ 1.79
LIMD2-206ENST00000578993 SF3B3Q15393 1217 aaKnown RBP26.2■■□□□ 1.78
LIMD2-206ENST00000578993 LARGE2Q8N3Y3 721 aa26.2■■□□□ 1.78
LIMD2-206ENST00000578993 JDP2Q8WYK2 163 aa26.2■■□□□ 1.78
LIMD2-206ENST00000578993 RTFDC1Q9BY42 306 aaPredicted RBP26.2■■□□□ 1.78
LIMD2-206ENST00000578993 SALL2Q9Y467 1007 aaPredicted RBP26.2■■□□□ 1.78
LIMD2-206ENST00000578993 CACNA1FO60840 1977 aa26.19■■□□□ 1.78
LIMD2-206ENST00000578993 IQCA1LA6NCM1 817 aa26.19■■□□□ 1.78
LIMD2-206ENST00000578993 TWISTNBQ3B726 338 aaPredicted RBP26.19■■□□□ 1.78
LIMD2-206ENST00000578993 GPC2Q8N158 579 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms