RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 COL13A1Q5TAT6 717 aaPredicted RBP11.74□□□□□ -0.53
GGA3-207ENST00000578896 GIGYF2Q6Y7W6 1299 aaKnown RBP11.74□□□□□ -0.53
GGA3-207ENST00000578896 RTKN2Q8IZC4 609 aa11.74□□□□□ -0.53
GGA3-207ENST00000578896 RPGRQ92834 1020 aaKnown RBP11.74□□□□□ -0.53
GGA3-207ENST00000578896 TAF1DQ9H5J8 278 aaPredicted RBP11.74□□□□□ -0.53
GGA3-207ENST00000578896 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
GGA3-207ENST00000578896 XAGE3Q8WTP9 111 aa11.73□□□□□ -0.53
GGA3-207ENST00000578896 MKRN1Q9UHC7 482 aaKnown RBP11.73□□□□□ -0.53
GGA3-207ENST00000578896 COL4A5P29400 1685 aa11.72□□□□□ -0.53
GGA3-207ENST00000578896 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
GGA3-207ENST00000578896 MYBBP1AQ9BQG0 1328 aaKnown RBP11.72□□□□□ -0.53
GGA3-207ENST00000578896 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
GGA3-207ENST00000578896 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
GGA3-207ENST00000578896 GJA3Q9Y6H8 435 aa11.72□□□□□ -0.53
GGA3-207ENST00000578896 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
GGA3-207ENST00000578896 FZD9O00144 591 aa11.71□□□□□ -0.53
GGA3-207ENST00000578896 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.53
GGA3-207ENST00000578896 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.53
GGA3-207ENST00000578896 PPP1R42Q7Z4L9 355 aa11.71□□□□□ -0.53
GGA3-207ENST00000578896 RBM17Q96I25 401 aaKnown RBP11.71□□□□□ -0.53
GGA3-207ENST00000578896 L3MBTL3Q96JM7 780 aaPredicted RBP11.71□□□□□ -0.53
GGA3-207ENST00000578896 UTP14AQ9BVJ6 771 aaKnown RBP11.71□□□□□ -0.53
GGA3-207ENST00000578896 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.53
GGA3-207ENST00000578896 TAF1P21675 1872 aa11.71□□□□□ -0.53
GGA3-207ENST00000578896 SCN4AP35499 1836 aa11.71□□□□□ -0.54
GGA3-207ENST00000578896 SNED1Q8TER0 1413 aa11.7□□□□□ -0.54
GGA3-207ENST00000578896 IQCA1LA6NCM1 817 aa11.7□□□□□ -0.54
GGA3-207ENST00000578896 PPEF1O14829 653 aaPredicted RBP11.7□□□□□ -0.54
GGA3-207ENST00000578896 HSPA1AP0DMV8 641 aaKnown RBP11.7□□□□□ -0.54
GGA3-207ENST00000578896 HSPA1BP0DMV9 641 aaKnown RBP11.7□□□□□ -0.54
GGA3-207ENST00000578896 EPHX2P34913 555 aa11.7□□□□□ -0.54
GGA3-207ENST00000578896 LMOD3Q0VAK6 560 aa11.7□□□□□ -0.54
GGA3-207ENST00000578896 WDR43Q15061 677 aaKnown RBP eCLIP11.7□□□□□ -0.54
GGA3-207ENST00000578896 LDHDQ86WU2 507 aa11.7□□□□□ -0.54
GGA3-207ENST00000578896 NLRP3Q96P20 1036 aa11.7□□□□□ -0.54
GGA3-207ENST00000578896 PSMD1Q99460 953 aa11.7□□□□□ -0.54
GGA3-207ENST00000578896 HACL1Q9UJ83 578 aa11.7□□□□□ -0.54
GGA3-207ENST00000578896 CHL1O00533 1208 aa11.69□□□□□ -0.54
GGA3-207ENST00000578896 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
GGA3-207ENST00000578896 MAP1SQ66K74 1059 aaPredicted RBP11.69□□□□□ -0.54
GGA3-207ENST00000578896 NLRP10Q86W26 655 aa11.69□□□□□ -0.54
GGA3-207ENST00000578896 LARGE2Q8N3Y3 721 aa11.69□□□□□ -0.54
GGA3-207ENST00000578896 JDP2Q8WYK2 163 aa11.69□□□□□ -0.54
GGA3-207ENST00000578896 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
GGA3-207ENST00000578896 CRAMP1Q96RY5 1269 aa11.69□□□□□ -0.54
GGA3-207ENST00000578896 CHPF2Q9P2E5 772 aa11.69□□□□□ -0.54
GGA3-207ENST00000578896 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
GGA3-207ENST00000578896 ABCC4O15439 1325 aa11.68□□□□□ -0.54
GGA3-207ENST00000578896 PASKQ96RG2 1323 aa11.68□□□□□ -0.54
GGA3-207ENST00000578896 CAPN15O75808 1086 aa11.68□□□□□ -0.54
GGA3-207ENST00000578896 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
GGA3-207ENST00000578896 EIF6P56537 245 aaKnown RBP11.68□□□□□ -0.54
GGA3-207ENST00000578896 FMR1Q06787 632 aaKnown RBP eCLIP11.68□□□□□ -0.54
GGA3-207ENST00000578896 TCIRG1Q13488 830 aa11.68□□□□□ -0.54
GGA3-207ENST00000578896 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
GGA3-207ENST00000578896 DDX21Q9NR30 783 aaKnown RBP eCLIP11.68□□□□□ -0.54
GGA3-207ENST00000578896 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
GGA3-207ENST00000578896 BABAM1Q9NWV8 329 aa11.68□□□□□ -0.54
GGA3-207ENST00000578896 LAMB2P55268 1798 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 ATP5J2-PTCD1G3V325 749 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 PPIP5K2O43314 1243 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 EPS15P42566 896 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 AOC3Q16853 763 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 RTL5Q5HYW3 569 aaPredicted RBP11.67□□□□□ -0.54
GGA3-207ENST00000578896 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 CC2D2BQ6DHV5 1058 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 GPC2Q8N158 579 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 TRMT112Q9UI30 125 aaKnown RBP11.67□□□□□ -0.54
GGA3-207ENST00000578896 RIC1Q4ADV7 1423 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 ANKRD36CQ5JPF3 1778 aa11.67□□□□□ -0.54
GGA3-207ENST00000578896 LTBP1Q14766 1721 aa11.66□□□□□ -0.54
GGA3-207ENST00000578896 ELL2O00472 640 aaPredicted RBP11.66□□□□□ -0.54
GGA3-207ENST00000578896 CNTROBQ8N137 903 aa11.66□□□□□ -0.54
GGA3-207ENST00000578896 ATP6V0A2Q9Y487 856 aa11.66□□□□□ -0.54
GGA3-207ENST00000578896 TMEM88BA6NKF7 163 aa11.65□□□□□ -0.54
GGA3-207ENST00000578896 SCNN1DP51172 638 aa11.65□□□□□ -0.54
GGA3-207ENST00000578896 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
GGA3-207ENST00000578896 DUSP27Q5VZP5 1158 aa11.65□□□□□ -0.54
GGA3-207ENST00000578896 NIM1KQ8IY84 436 aa11.65□□□□□ -0.54
GGA3-207ENST00000578896 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
GGA3-207ENST00000578896 FAM89AQ96GI7 184 aa11.65□□□□□ -0.54
GGA3-207ENST00000578896 PRKRIP1Q9H875 184 aaPredicted RBP11.65□□□□□ -0.54
GGA3-207ENST00000578896 MBIPQ9NS73 344 aa11.65□□□□□ -0.54
GGA3-207ENST00000578896 ADAMTSL1Q8N6G6 1762 aa11.64□□□□□ -0.55
GGA3-207ENST00000578896 SH3TC1Q8TE82 1336 aa11.64□□□□□ -0.55
GGA3-207ENST00000578896 APAF1O14727 1248 aa11.64□□□□□ -0.55
GGA3-207ENST00000578896 LMOD1P29536 600 aaPredicted RBP11.64□□□□□ -0.55
GGA3-207ENST00000578896 VEGFBP49765 207 aa11.64□□□□□ -0.55
GGA3-207ENST00000578896 DPP8Q6V1X1 898 aaPredicted RBP11.64□□□□□ -0.55
GGA3-207ENST00000578896 ANKRD13DQ6ZTN6 518 aa11.64□□□□□ -0.55
GGA3-207ENST00000578896 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
GGA3-207ENST00000578896 PNMA8AQ86V59 439 aaPredicted RBP11.64□□□□□ -0.55
GGA3-207ENST00000578896 MPNDQ8N594 471 aa11.64□□□□□ -0.55
GGA3-207ENST00000578896 TMX4Q9H1E5 349 aaPredicted RBP11.64□□□□□ -0.55
GGA3-207ENST00000578896 CNTNAP1P78357 1384 aa11.64□□□□□ -0.55
GGA3-207ENST00000578896 TRAF5O00463 557 aa11.63□□□□□ -0.55
GGA3-207ENST00000578896 CXCL9Q07325 125 aa11.63□□□□□ -0.55
GGA3-207ENST00000578896 GRAPQ13588 217 aa11.63□□□□□ -0.55
GGA3-207ENST00000578896 SP8Q8IXZ3 490 aa11.63□□□□□ -0.55
GGA3-207ENST00000578896 PLBD2Q8NHP8 589 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms