RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 G2E3Q7L622 706 aa13.62□□□□□ -0.23
ERBB2-207ENST00000578502 PLBD2Q8NHP8 589 aa13.62□□□□□ -0.23
ERBB2-207ENST00000578502 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
ERBB2-207ENST00000578502 ARFGEF2Q9Y6D5 1785 aa13.62□□□□□ -0.23
ERBB2-207ENST00000578502 MIER1Q8N108 512 aa13.61□□□□□ -0.23
ERBB2-207ENST00000578502 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
ERBB2-207ENST00000578502 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
ERBB2-207ENST00000578502 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
ERBB2-207ENST00000578502 NPR1P16066 1061 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 CCDC88AQ3V6T2 1871 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 PARP10Q53GL7 1025 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 DIEXFQ68CQ4 756 aaKnown RBP13.6□□□□□ -0.23
ERBB2-207ENST00000578502 PPP1R42Q7Z4L9 355 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 C7orf43Q8WVR3 580 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 CNKSR1Q969H4 720 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 ISCA1Q9BUE6 129 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 PDZRN3Q9UPQ7 1066 aa13.6□□□□□ -0.23
ERBB2-207ENST00000578502 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
ERBB2-207ENST00000578502 LAMB2P55268 1798 aa13.59□□□□□ -0.23
ERBB2-207ENST00000578502 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
ERBB2-207ENST00000578502 VAMP4O75379 141 aa13.59□□□□□ -0.23
ERBB2-207ENST00000578502 CRY2Q49AN0 593 aa13.59□□□□□ -0.23
ERBB2-207ENST00000578502 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
ERBB2-207ENST00000578502 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
ERBB2-207ENST00000578502 RIC3Q7Z5B4 369 aa13.59□□□□□ -0.23
ERBB2-207ENST00000578502 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
ERBB2-207ENST00000578502 TRMT112Q9UI30 125 aaKnown RBP13.59□□□□□ -0.23
ERBB2-207ENST00000578502 FER1L6Q2WGJ9 1857 aa13.59□□□□□ -0.23
ERBB2-207ENST00000578502 SLC4A2P04920 1241 aa13.58□□□□□ -0.24
ERBB2-207ENST00000578502 GOLGA2Q08379 1002 aa13.58□□□□□ -0.24
ERBB2-207ENST00000578502 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-207ENST00000578502 FAM89AQ96GI7 184 aa13.58□□□□□ -0.24
ERBB2-207ENST00000578502 MYD88Q99836 296 aa13.58□□□□□ -0.24
ERBB2-207ENST00000578502 TAF1P21675 1872 aa13.57□□□□□ -0.24
ERBB2-207ENST00000578502 DDX60Q8IY21 1712 aaKnown RBP13.57□□□□□ -0.24
ERBB2-207ENST00000578502 SLC10A5Q5PT55 438 aa13.57□□□□□ -0.24
ERBB2-207ENST00000578502 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
ERBB2-207ENST00000578502 PI4KAP2A4QPH2 592 aa13.56□□□□□ -0.24
ERBB2-207ENST00000578502 HOXA10P31260 410 aaPredicted RBP13.56□□□□□ -0.24
ERBB2-207ENST00000578502 PI4KAP1Q8N8J0 262 aa13.56□□□□□ -0.24
ERBB2-207ENST00000578502 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
ERBB2-207ENST00000578502 NLRP3Q96P20 1036 aa13.56□□□□□ -0.24
ERBB2-207ENST00000578502 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
ERBB2-207ENST00000578502 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
ERBB2-207ENST00000578502 COL4A1P02462 1669 aa13.56□□□□□ -0.24
ERBB2-207ENST00000578502 LMNB1P20700 586 aa13.55□□□□□ -0.24
ERBB2-207ENST00000578502 RPGRQ92834 1020 aaKnown RBP13.55□□□□□ -0.24
ERBB2-207ENST00000578502 MYH16Q9H6N6 1097 aa13.55□□□□□ -0.24
ERBB2-207ENST00000578502 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-207ENST00000578502 SH3TC1Q8TE82 1336 aa13.55□□□□□ -0.24
ERBB2-207ENST00000578502 TIAM2Q8IVF5 1701 aa13.54□□□□□ -0.24
ERBB2-207ENST00000578502 IGKV5-2P06315 115 aa13.54□□□□□ -0.24
ERBB2-207ENST00000578502 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
ERBB2-207ENST00000578502 KSR2Q6VAB6 950 aa13.54□□□□□ -0.24
ERBB2-207ENST00000578502 RBM17Q96I25 401 aaKnown RBP13.54□□□□□ -0.24
ERBB2-207ENST00000578502 METTL22Q9BUU2 404 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-207ENST00000578502 ABCC4O15439 1325 aa13.54□□□□□ -0.24
ERBB2-207ENST00000578502 FLIIQ13045 1269 aa13.53□□□□□ -0.24
ERBB2-207ENST00000578502 TRIM28Q13263 835 aaKnown RBP13.53□□□□□ -0.24
ERBB2-207ENST00000578502 CWF19L2Q2TBE0 894 aaKnown RBP13.53□□□□□ -0.24
ERBB2-207ENST00000578502 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
ERBB2-207ENST00000578502 CRAMP1Q96RY5 1269 aa13.53□□□□□ -0.24
ERBB2-207ENST00000578502 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
ERBB2-207ENST00000578502 NMRK2Q9NPI5 230 aa13.53□□□□□ -0.24
ERBB2-207ENST00000578502 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-207ENST00000578502 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.25
ERBB2-207ENST00000578502 SLFN5Q08AF3 891 aa13.52□□□□□ -0.25
ERBB2-207ENST00000578502 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.25
ERBB2-207ENST00000578502 SNED1Q8TER0 1413 aa13.52□□□□□ -0.25
ERBB2-207ENST00000578502 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
ERBB2-207ENST00000578502 IRS4O14654 1257 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-207ENST00000578502 KIF3CO14782 793 aa13.51□□□□□ -0.25
ERBB2-207ENST00000578502 PPEF1O14829 653 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-207ENST00000578502 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-207ENST00000578502 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
ERBB2-207ENST00000578502 CWC25Q9NXE8 425 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-207ENST00000578502 LTBP3Q9NS15 1303 aa13.5□□□□□ -0.25
ERBB2-207ENST00000578502 F6X3S4 739 aa13.5□□□□□ -0.25
ERBB2-207ENST00000578502 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
ERBB2-207ENST00000578502 FKBP5Q13451 457 aaPredicted RBP13.5□□□□□ -0.25
ERBB2-207ENST00000578502 SOGA3Q5TF21 947 aa13.5□□□□□ -0.25
ERBB2-207ENST00000578502 ZBTB38Q8NAP3 1195 aaPredicted RBP13.5□□□□□ -0.25
ERBB2-207ENST00000578502 CCDC191Q8NCU4 936 aa13.5□□□□□ -0.25
ERBB2-207ENST00000578502 COL4A5P29400 1685 aa13.5□□□□□ -0.25
ERBB2-207ENST00000578502 NEURL1BA8MQ27 555 aa13.49□□□□□ -0.25
ERBB2-207ENST00000578502 E9PSI1 815 aa13.49□□□□□ -0.25
ERBB2-207ENST00000578502 PCCAP05165 728 aaPredicted RBP13.49□□□□□ -0.25
ERBB2-207ENST00000578502 C1QTNF8P60827 252 aa13.49□□□□□ -0.25
ERBB2-207ENST00000578502 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
ERBB2-207ENST00000578502 CELF1Q92879 486 aaKnown RBP13.49□□□□□ -0.25
ERBB2-207ENST00000578502 RRAGCQ9HB90 399 aa13.49□□□□□ -0.25
ERBB2-207ENST00000578502 SEC31BQ9NQW1 1179 aa13.49□□□□□ -0.25
ERBB2-207ENST00000578502 CACNA1FO60840 1977 aa13.49□□□□□ -0.25
ERBB2-207ENST00000578502 GRAPQ13588 217 aa13.48□□□□□ -0.25
ERBB2-207ENST00000578502 SF3B3Q15393 1217 aaKnown RBP13.48□□□□□ -0.25
ERBB2-207ENST00000578502 TRMT2AQ8IZ69 625 aaKnown RBP13.48□□□□□ -0.25
ERBB2-207ENST00000578502 RTKN2Q8IZC4 609 aa13.48□□□□□ -0.25
ERBB2-207ENST00000578502 GRAPLQ8TC17 118 aaPredicted RBP13.48□□□□□ -0.25
ERBB2-207ENST00000578502 DNAAF4Q8WXU2 420 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms