RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 DBF4Q9UBU7 674 aaPredicted RBP8.6□□□□□ -1.03
PPP4R1-207ENST00000578010 SOS1Q07889 1333 aaPredicted RBP8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 MYH14Q7Z406 1995 aaKnown RBP8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 PDIA6Q15084 440 aa8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 PROSER3Q2NL68 480 aa8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 KIF6Q6ZMV9 814 aa8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 EFCAB3Q8N7B9 438 aa8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 XAGE3Q8WTP9 111 aa8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 SCUBE2Q9NQ36 999 aa8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 DDX21Q9NR30 783 aaKnown RBP eCLIP8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 HYPKQ9NX55 129 aa8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 NARFQ9UHQ1 456 aa8.59□□□□□ -1.03
PPP4R1-207ENST00000578010 TTLL7Q6ZT98 887 aa8.58□□□□□ -1.04
PPP4R1-207ENST00000578010 RIC3Q7Z5B4 369 aa8.58□□□□□ -1.04
PPP4R1-207ENST00000578010 L3MBTL3Q96JM7 780 aaPredicted RBP8.58□□□□□ -1.04
PPP4R1-207ENST00000578010 ZBTB3Q9H5J0 574 aa8.58□□□□□ -1.04
PPP4R1-207ENST00000578010 STK24Q9Y6E0 443 aa8.58□□□□□ -1.04
PPP4R1-207ENST00000578010 COL24A1Q17RW2 1714 aa8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 ERBB4Q15303 1308 aa8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 NPHP1O15259 732 aa8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 GYS1P13807 737 aa8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 HLFQ16534 295 aa8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 ANKRD13DQ6ZTN6 518 aa8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 TRMT2AQ8IZ69 625 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 PHAXQ9H814 394 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 PARP3Q9Y6F1 533 aa8.57□□□□□ -1.04
PPP4R1-207ENST00000578010 ZBED9Q6R2W3 1325 aa8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 FAM177BA6PVY3 158 aa8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 ERVV-1B6SEH8 477 aa8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 CAMTA2O94983 1202 aa8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 DDX58O95786 925 aaKnown RBP8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 MMP10P09238 476 aa8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 GTF2E1P29083 439 aaPredicted RBP8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 HS6ST3Q8IZP7 471 aa8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 ZNF652Q9Y2D9 606 aa8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 COL15A1P39059 1388 aa8.56□□□□□ -1.04
PPP4R1-207ENST00000578010 USP42Q9H9J4 1324 aaKnown RBP8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 TM4SF1P30408 202 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 PTGER2P43116 358 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 NFIXQ14938 502 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 TBC1D9BQ66K14 1250 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 G2E3Q7L622 706 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 BCL2L13Q9BXK5 485 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 BCL2L12Q9HB09 334 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 SCN7AQ01118 1682 aa8.55□□□□□ -1.04
PPP4R1-207ENST00000578010 MAP3K15Q6ZN16 1313 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 BCORQ6W2J9 1755 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 SERPINB2P05120 415 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 GPTP24298 496 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 FKBP5Q13451 457 aaPredicted RBP8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 HSP90AB3PQ58FF7 597 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 LRP10Q7Z4F1 713 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 SSH1Q8WYL5 1049 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 ZNF428Q96B54 188 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 SMC4Q9NTJ3 1288 aa8.54□□□□□ -1.04
PPP4R1-207ENST00000578010 PI4KAP2A4QPH2 592 aa8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 ATP5J2-PTCD1G3V325 749 aa8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 CT47B1P0C2W7 299 aaPredicted RBP8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 FLIIQ13045 1269 aa8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 TCIRG1Q13488 830 aa8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 KSR2Q6VAB6 950 aa8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 TPTE2Q6XPS3 522 aa8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 CCDC24Q8N4L8 307 aa8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 PI4KAP1Q8N8J0 262 aa8.53□□□□□ -1.04
PPP4R1-207ENST00000578010 RARSP54136 660 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 NEXNQ0ZGT2 675 aa8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 ALDH1L2Q3SY69 923 aa8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 SLC4A10Q6U841 1118 aa8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 NBPF5PQ86XG9 351 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 FRAT1Q92837 279 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 MYD88Q99836 296 aa8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 NOB1Q9ULX3 412 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 MAP3K2Q9Y2U5 619 aa8.52□□□□□ -1.05
PPP4R1-207ENST00000578010 F6X3S4 739 aa8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 POLRMTO00411 1230 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 BCAR3O75815 825 aa8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 DDR1Q08345 913 aa8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 RTL5Q5HYW3 569 aaPredicted RBP8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 SUSD4Q5VX71 490 aa8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 METTL22Q9BUU2 404 aaPredicted RBP8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 UTP14AQ9BVJ6 771 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 TRMT112Q9UI30 125 aaKnown RBP8.51□□□□□ -1.05
PPP4R1-207ENST00000578010 N4BP2Q86UW6 1770 aaPredicted RBP8.5□□□□□ -1.05
PPP4R1-207ENST00000578010 AFDNP55196 1824 aaKnown RBP8.5□□□□□ -1.05
PPP4R1-207ENST00000578010 IPO8O15397 1037 aaKnown RBP8.5□□□□□ -1.05
PPP4R1-207ENST00000578010 ST5P78524 1137 aa8.5□□□□□ -1.05
PPP4R1-207ENST00000578010 PARP10Q53GL7 1025 aa8.5□□□□□ -1.05
PPP4R1-207ENST00000578010 NLRP10Q86W26 655 aa8.5□□□□□ -1.05
PPP4R1-207ENST00000578010 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
PPP4R1-207ENST00000578010 CNBD1Q8NA66 436 aa8.5□□□□□ -1.05
PPP4R1-207ENST00000578010 FBXO22Q8NEZ5 403 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms