RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 CCDC27Q2M243 656 aa7.81□□□□□ -1.16
TRAPPC8-203ENST00000577474 SLFNL1Q499Z3 407 aa7.81□□□□□ -1.16
TRAPPC8-203ENST00000577474 LENG1Q96BZ8 264 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC8-203ENST00000577474 AMOTL2Q9Y2J4 779 aa7.81□□□□□ -1.16
TRAPPC8-203ENST00000577474 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
TRAPPC8-203ENST00000577474 A6NJY4 79 aa7.8□□□□□ -1.16
TRAPPC8-203ENST00000577474 TMEM229AB2RXF0 380 aa7.8□□□□□ -1.16
TRAPPC8-203ENST00000577474 TXLNAP40222 546 aa7.8□□□□□ -1.16
TRAPPC8-203ENST00000577474 SFSWAPQ12872 951 aaKnown RBP7.8□□□□□ -1.16
TRAPPC8-203ENST00000577474 SND1Q7KZF4 910 aaKnown RBP eCLIP7.8□□□□□ -1.16
TRAPPC8-203ENST00000577474 SSBP4Q9BWG4 385 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC8-203ENST00000577474 A0A0A0MRY4 1105 aa7.79□□□□□ -1.16
TRAPPC8-203ENST00000577474 TMEM88BA6NKF7 163 aa7.79□□□□□ -1.16
TRAPPC8-203ENST00000577474 ELNP15502 786 aa7.79□□□□□ -1.16
TRAPPC8-203ENST00000577474 ADH7P40394 386 aa7.79□□□□□ -1.16
TRAPPC8-203ENST00000577474 SHISA2Q6UWI4 295 aa7.79□□□□□ -1.16
TRAPPC8-203ENST00000577474 PLEKHM2Q8IWE5 1019 aa7.79□□□□□ -1.16
TRAPPC8-203ENST00000577474 GNEQ9Y223 722 aaKnown RBP7.79□□□□□ -1.16
TRAPPC8-203ENST00000577474 IVNS1ABPQ9Y6Y0 642 aa7.79□□□□□ -1.16
TRAPPC8-203ENST00000577474 LZTS3O60299 673 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC8-203ENST00000577474 NRG1Q02297 640 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC8-203ENST00000577474 LRRC69Q6ZNQ3 347 aa7.78□□□□□ -1.16
TRAPPC8-203ENST00000577474 RNF112Q9ULX5 631 aa7.78□□□□□ -1.16
TRAPPC8-203ENST00000577474 COL17A1Q9UMD9 1497 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC8-203ENST00000577474 CCER1Q8TC90 406 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC8-203ENST00000577474 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
TRAPPC8-203ENST00000577474 C7orf43Q8WVR3 580 aa7.76□□□□□ -1.17
TRAPPC8-203ENST00000577474 USP17L3A6NCW0 530 aa7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 USP17L4A6NCW7 530 aa7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 FAM196BA6NMK8 535 aa7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 LILRB5O75023 590 aa7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 SPEM2Q0P670 501 aa7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 KANK4Q5T7N3 995 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 USP17L1Q7RTZ2 530 aa7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 RAB44Q7Z6P3 723 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 ZDHHC1Q8WTX9 485 aa7.75□□□□□ -1.17
TRAPPC8-203ENST00000577474 USP17L5A8MUK1 530 aa7.74□□□□□ -1.17
TRAPPC8-203ENST00000577474 E9PSI1 815 aa7.74□□□□□ -1.17
TRAPPC8-203ENST00000577474 EML1O00423 815 aa7.74□□□□□ -1.17
TRAPPC8-203ENST00000577474 PAX4O43316 350 aa7.74□□□□□ -1.17
TRAPPC8-203ENST00000577474 COBLO75128 1261 aa7.74□□□□□ -1.17
TRAPPC8-203ENST00000577474 SKIP12755 728 aa7.74□□□□□ -1.17
TRAPPC8-203ENST00000577474 CDCA8Q53HL2 280 aa7.74□□□□□ -1.17
TRAPPC8-203ENST00000577474 LCE1DQ5T752 114 aa7.74□□□□□ -1.17
TRAPPC8-203ENST00000577474 TXKP42681 527 aa7.73□□□□□ -1.17
TRAPPC8-203ENST00000577474 RBM25P49756 843 aaKnown RBP7.73□□□□□ -1.17
TRAPPC8-203ENST00000577474 LARP1Q6PKG0 1096 aaKnown RBP7.73□□□□□ -1.17
TRAPPC8-203ENST00000577474 L3MBTL2Q969R5 705 aa7.73□□□□□ -1.17
TRAPPC8-203ENST00000577474 FMNL2Q96PY5 1086 aa7.73□□□□□ -1.17
TRAPPC8-203ENST00000577474 NOVA2Q9UNW9 492 aaKnown RBP7.73□□□□□ -1.17
TRAPPC8-203ENST00000577474 ERCC3P19447 782 aa7.72□□□□□ -1.17
TRAPPC8-203ENST00000577474 RAC1P63000 192 aa7.72□□□□□ -1.17
TRAPPC8-203ENST00000577474 NEUROD1Q13562 356 aa7.72□□□□□ -1.17
TRAPPC8-203ENST00000577474 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
TRAPPC8-203ENST00000577474 ILDR2Q71H61 639 aa7.72□□□□□ -1.17
TRAPPC8-203ENST00000577474 FOXD4L4Q8WXT5 416 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC8-203ENST00000577474 NEUROD4Q9HD90 331 aa7.72□□□□□ -1.17
TRAPPC8-203ENST00000577474 USP21Q9UK80 565 aa7.72□□□□□ -1.17
TRAPPC8-203ENST00000577474 YBX3P16989 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
TRAPPC8-203ENST00000577474 ARID4AP29374 1257 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC8-203ENST00000577474 NOS2P35228 1153 aa7.71□□□□□ -1.18
TRAPPC8-203ENST00000577474 TEAD4Q15561 434 aa7.71□□□□□ -1.18
TRAPPC8-203ENST00000577474 PLPP7Q8NBV4 271 aa7.71□□□□□ -1.18
TRAPPC8-203ENST00000577474 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC8-203ENST00000577474 TMEM164Q5U3C3 297 aa7.7□□□□□ -1.18
TRAPPC8-203ENST00000577474 TRIM50Q86XT4 487 aa7.7□□□□□ -1.18
TRAPPC8-203ENST00000577474 FMR1NBQ8N0W7 255 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC8-203ENST00000577474 PCDHGA11Q9Y5H2 935 aa7.7□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L15C9J2P7 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L10C9JJH3 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L13C9JLJ4 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L12C9JPN9 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L11C9JVI0 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L21D6R901 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L18D6R9N7 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L22D6RA61 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L17D6RBQ6 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L19D6RCP7 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L20D6RJB6 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 PIK3CDO00329 1044 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 USP17L24Q0WX57 530 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 FAM200AQ8TCP9 573 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 NUDT8Q8WV74 236 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 JPH1Q9HDC5 661 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 PCMTD2Q9NV79 361 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 MKRN1Q9UHC7 482 aaKnown RBP7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 ZMIZ1Q9ULJ6 1067 aa7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 GPC6Q9Y625 555 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC8-203ENST00000577474 CARNS1A5YM72 827 aa7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 BACH1O14867 736 aa7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 ATP1A2P50993 1020 aa7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 AFF1P51825 1210 aaKnown RBP7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 EML3Q32P44 896 aa7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 TXNDC2Q86VQ3 553 aa7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 DMRTC2Q8IXT2 367 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 STK32AQ8WU08 396 aa7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 WFDC12Q8WWY7 111 aa7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 CLP1Q92989 425 aaKnown RBP7.68□□□□□ -1.18
TRAPPC8-203ENST00000577474 BRD7Q9NPI1 651 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms