RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 CHRNA5P30532 468 aa16.22■□□□□ 0.19
CDK5RAP3-203ENST00000577442 ALDH1L2Q3SY69 923 aa16.22■□□□□ 0.19
CDK5RAP3-203ENST00000577442 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
CDK5RAP3-203ENST00000577442 MYD88Q99836 296 aa16.22■□□□□ 0.19
CDK5RAP3-203ENST00000577442 TRMT112Q9UI30 125 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-203ENST00000577442 ADCY9O60503 1353 aa16.22■□□□□ 0.19
CDK5RAP3-203ENST00000577442 ABCC12Q96J65 1359 aa16.22■□□□□ 0.19
CDK5RAP3-203ENST00000577442 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-203ENST00000577442 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-203ENST00000577442 GRIN3BO60391 1043 aa16.21■□□□□ 0.19
CDK5RAP3-203ENST00000577442 NUTM1Q86Y26 1132 aa16.21■□□□□ 0.19
CDK5RAP3-203ENST00000577442 ARFGEF1Q9Y6D6 1849 aa16.21■□□□□ 0.19
CDK5RAP3-203ENST00000577442 SH3TC1Q8TE82 1336 aa16.2■□□□□ 0.18
CDK5RAP3-203ENST00000577442 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
CDK5RAP3-203ENST00000577442 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-203ENST00000577442 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
CDK5RAP3-203ENST00000577442 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-203ENST00000577442 CCDC191Q8NCU4 936 aa16.2■□□□□ 0.18
CDK5RAP3-203ENST00000577442 DNAAF4Q8WXU2 420 aa16.2■□□□□ 0.18
CDK5RAP3-203ENST00000577442 TNRC6CQ9HCJ0 1690 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 KLRG2A4D1S0 409 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 KCNA3P22001 575 aa16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 SSH1Q8WYL5 1049 aa16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 MASTLQ96GX5 879 aa16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 CWC25Q9NXE8 425 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 BCS1LQ9Y276 419 aa16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 PTPRCP08575 1304 aa16.19■□□□□ 0.18
CDK5RAP3-203ENST00000577442 CHD4Q14839 1912 aa16.18■□□□□ 0.18
CDK5RAP3-203ENST00000577442 NPR1P16066 1061 aa16.18■□□□□ 0.18
CDK5RAP3-203ENST00000577442 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.18
CDK5RAP3-203ENST00000577442 STYK1Q6J9G0 422 aa16.18■□□□□ 0.18
CDK5RAP3-203ENST00000577442 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-203ENST00000577442 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
CDK5RAP3-203ENST00000577442 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
CDK5RAP3-203ENST00000577442 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.189e-13■■□□□ 12.1
CDK5RAP3-203ENST00000577442 LAMB2P55268 1798 aa16.18■□□□□ 0.18
CDK5RAP3-203ENST00000577442 SRGNP10124 158 aa16.17■□□□□ 0.18
CDK5RAP3-203ENST00000577442 SLC10A5Q5PT55 438 aa16.17■□□□□ 0.18
CDK5RAP3-203ENST00000577442 NLRP3Q96P20 1036 aa16.17■□□□□ 0.18
CDK5RAP3-203ENST00000577442 WWC3Q9ULE0 1092 aa16.17■□□□□ 0.18
CDK5RAP3-203ENST00000577442 PCCAP05165 728 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-203ENST00000577442 CRY2Q49AN0 593 aa16.16■□□□□ 0.18
CDK5RAP3-203ENST00000577442 ZBTB38Q8NAP3 1195 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-203ENST00000577442 LINS1Q8NG48 757 aa16.16■□□□□ 0.18
CDK5RAP3-203ENST00000577442 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-203ENST00000577442 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
CDK5RAP3-203ENST00000577442 BRPF1P55201 1214 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-203ENST00000577442 CACNA1SQ13698 1873 aa16.15■□□□□ 0.18
CDK5RAP3-203ENST00000577442 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
CDK5RAP3-203ENST00000577442 KIF16BQ96L93 1317 aa16.15■□□□□ 0.18
CDK5RAP3-203ENST00000577442 UTRNP46939 3433 aa16.15■□□□□ 0.18
CDK5RAP3-203ENST00000577442 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-203ENST00000577442 IGKV5-2P06315 115 aa16.14■□□□□ 0.17
CDK5RAP3-203ENST00000577442 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-203ENST00000577442 ALDH1B1P30837 517 aa16.14■□□□□ 0.17
CDK5RAP3-203ENST00000577442 RARSP54136 660 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-203ENST00000577442 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
CDK5RAP3-203ENST00000577442 F6X3S4 739 aa16.13■□□□□ 0.17
CDK5RAP3-203ENST00000577442 IRS4O14654 1257 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-203ENST00000577442 CWF19L2Q2TBE0 894 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-203ENST00000577442 SOGA3Q5TF21 947 aa16.13■□□□□ 0.17
CDK5RAP3-203ENST00000577442 RBM17Q96I25 401 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-203ENST00000577442 CDHR2Q9BYE9 1310 aa16.13■□□□□ 0.17
CDK5RAP3-203ENST00000577442 SLX4Q8IY92 1834 aa16.12■□□□□ 0.17
CDK5RAP3-203ENST00000577442 MYH3P11055 1940 aa16.12■□□□□ 0.17
CDK5RAP3-203ENST00000577442 ALDH1L1O75891 902 aa16.12■□□□□ 0.17
CDK5RAP3-203ENST00000577442 HOXA10P31260 410 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-203ENST00000577442 GCKRQ14397 625 aa16.12■□□□□ 0.17
CDK5RAP3-203ENST00000577442 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-203ENST00000577442 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-203ENST00000577442 BEND3Q5T5X7 828 aa16.11■□□□□ 0.17
CDK5RAP3-203ENST00000577442 SLC4A10Q6U841 1118 aa16.11■□□□□ 0.17
CDK5RAP3-203ENST00000577442 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
CDK5RAP3-203ENST00000577442 CRAMP1Q96RY5 1269 aa16.11■□□□□ 0.17
CDK5RAP3-203ENST00000577442 API5Q9BZZ5 524 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-203ENST00000577442 SRCIN1Q9C0H9 1055 aa16.11■□□□□ 0.17
CDK5RAP3-203ENST00000577442 PDE8AO60658 829 aa16.1■□□□□ 0.17
CDK5RAP3-203ENST00000577442 SF3B3Q15393 1217 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-203ENST00000577442 ARHGAP27Q6ZUM4 889 aa16.1■□□□□ 0.17
CDK5RAP3-203ENST00000577442 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
CDK5RAP3-203ENST00000577442 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-203ENST00000577442 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-203ENST00000577442 UBE3BQ7Z3V4 1068 aa16.09■□□□□ 0.17
CDK5RAP3-203ENST00000577442 H7C1W4 665 aa16.08■□□□□ 0.16
CDK5RAP3-203ENST00000577442 CCDC152Q4G0S7 254 aa16.08■□□□□ 0.16
CDK5RAP3-203ENST00000577442 CCDC93Q567U6 631 aa16.08■□□□□ 0.16
CDK5RAP3-203ENST00000577442 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.16
CDK5RAP3-203ENST00000577442 ARHGAP45Q92619 1136 aa16.08■□□□□ 0.16
CDK5RAP3-203ENST00000577442 TMX4Q9H1E5 349 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-203ENST00000577442 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-203ENST00000577442 ABCC4O15439 1325 aa16.08■□□□□ 0.16
CDK5RAP3-203ENST00000577442 GRM8O00222 908 aa16.07■□□□□ 0.16
CDK5RAP3-203ENST00000577442 C21orf2O43822 256 aa16.07■□□□□ 0.16
CDK5RAP3-203ENST00000577442 TMC4Q7Z404 712 aa16.07■□□□□ 0.16
CDK5RAP3-203ENST00000577442 PLA2G12BQ9BX93 195 aa16.07■□□□□ 0.16
CDK5RAP3-203ENST00000577442 C9orf78Q9NZ63 289 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-203ENST00000577442 FER1L6Q2WGJ9 1857 aa16.07■□□□□ 0.16
CDK5RAP3-203ENST00000577442 PPEF1O14829 653 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-203ENST00000577442 BBOX1O75936 387 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms