RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CST9Q5W186 159 aa13.54□□□□□ -0.24
NPLOC4-220ENST00000576940 CAPNS2Q96L46 248 aa13.54□□□□□ -0.24
NPLOC4-220ENST00000576940 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-220ENST00000576940 TSKSQ9UJT2 592 aa13.54□□□□□ -0.24
NPLOC4-220ENST00000576940 LMOD1P29536 600 aaPredicted RBP13.53□□□□□ -0.24
NPLOC4-220ENST00000576940 SCNN1DP51172 638 aa13.53□□□□□ -0.24
NPLOC4-220ENST00000576940 CRY2Q49AN0 593 aa13.53□□□□□ -0.24
NPLOC4-220ENST00000576940 COL4A5P29400 1685 aa13.53□□□□□ -0.24
NPLOC4-220ENST00000576940 RGL2O15211 777 aa13.52□□□□□ -0.25
NPLOC4-220ENST00000576940 AOC2O75106 756 aa13.52□□□□□ -0.25
NPLOC4-220ENST00000576940 LARGE2Q8N3Y3 721 aa13.52□□□□□ -0.25
NPLOC4-220ENST00000576940 BEGAINQ9BUH8 593 aa13.52□□□□□ -0.25
NPLOC4-220ENST00000576940 ABCC12Q96J65 1359 aa13.52□□□□□ -0.25
NPLOC4-220ENST00000576940 SNED1Q8TER0 1413 aa13.52□□□□□ -0.25
NPLOC4-220ENST00000576940 LTBP1Q14766 1721 aa13.52□□□□□ -0.25
NPLOC4-220ENST00000576940 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-220ENST00000576940 GPTP24298 496 aa13.51□□□□□ -0.25
NPLOC4-220ENST00000576940 ECE1P42892 770 aa13.51□□□□□ -0.25
NPLOC4-220ENST00000576940 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
NPLOC4-220ENST00000576940 TAF7Q15545 349 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-220ENST00000576940 CC2D2BQ6DHV5 1058 aa13.51□□□□□ -0.25
NPLOC4-220ENST00000576940 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
NPLOC4-220ENST00000576940 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
NPLOC4-220ENST00000576940 HOXA10P31260 410 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 MLLT1Q03111 559 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 RPGRQ92834 1020 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 NYXQ9GZU5 481 aa13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
NPLOC4-220ENST00000576940 NPC1L1Q9UHC9 1359 aa13.49□□□□□ -0.25
NPLOC4-220ENST00000576940 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
NPLOC4-220ENST00000576940 MYL6BP14649 208 aa13.49□□□□□ -0.25
NPLOC4-220ENST00000576940 RGS19P49795 217 aa13.49□□□□□ -0.25
NPLOC4-220ENST00000576940 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
NPLOC4-220ENST00000576940 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
NPLOC4-220ENST00000576940 MAP3K15Q6ZN16 1313 aa13.48□□□□□ -0.25
NPLOC4-220ENST00000576940 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
NPLOC4-220ENST00000576940 NIM1KQ8IY84 436 aa13.48□□□□□ -0.25
NPLOC4-220ENST00000576940 CRAMP1Q96RY5 1269 aa13.48□□□□□ -0.25
NPLOC4-220ENST00000576940 ZBTB3Q9H5J0 574 aa13.48□□□□□ -0.25
NPLOC4-220ENST00000576940 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 PPEF1O14829 653 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 MAP2K2P36507 400 aa13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 CXCL9Q07325 125 aa13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 AOC3Q16853 763 aa13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 SAPCD2Q86UD0 394 aa13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 GLIS2Q9BZE0 524 aaPredicted RBP13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
NPLOC4-220ENST00000576940 CELF2O95319 508 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-220ENST00000576940 GRIPAP1Q4V328 841 aa13.46□□□□□ -0.25
NPLOC4-220ENST00000576940 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
NPLOC4-220ENST00000576940 ZNF34Q8IZ26 560 aa13.46□□□□□ -0.25
NPLOC4-220ENST00000576940 ADARB2Q9NS39 739 aaKnown RBP13.46□□□□□ -0.25
NPLOC4-220ENST00000576940 PPP2R1AP30153 589 aa13.45□□□□□ -0.26
NPLOC4-220ENST00000576940 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-220ENST00000576940 MCOLN1Q9GZU1 580 aa13.45□□□□□ -0.26
NPLOC4-220ENST00000576940 ZNF408Q9H9D4 720 aa13.45□□□□□ -0.26
NPLOC4-220ENST00000576940 NUP98P52948 1817 aa13.45□□□□□ -0.26
NPLOC4-220ENST00000576940 NTSR2O95665 410 aa13.44□□□□□ -0.26
NPLOC4-220ENST00000576940 GMPSP49915 693 aaPredicted RBP13.44□□□□□ -0.26
NPLOC4-220ENST00000576940 HIRAP54198 1017 aaPredicted RBP13.44□□□□□ -0.26
NPLOC4-220ENST00000576940 NLRP3Q96P20 1036 aa13.44□□□□□ -0.26
NPLOC4-220ENST00000576940 ZIC5Q96T25 663 aa13.44□□□□□ -0.26
NPLOC4-220ENST00000576940 ZNRF3Q9ULT6 936 aa13.44□□□□□ -0.26
NPLOC4-220ENST00000576940 ATP6V0A2Q9Y487 856 aa13.44□□□□□ -0.26
NPLOC4-220ENST00000576940 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
NPLOC4-220ENST00000576940 CASP8AP2Q9UKL3 1982 aa13.43□□□□□ -0.26
NPLOC4-220ENST00000576940 CIAPIN1Q6FI81 312 aa13.43□□□□□ -0.26
NPLOC4-220ENST00000576940 DLK2Q6UY11 383 aa13.43□□□□□ -0.26
NPLOC4-220ENST00000576940 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-220ENST00000576940 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-220ENST00000576940 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
NPLOC4-220ENST00000576940 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
NPLOC4-220ENST00000576940 SHTN1A0MZ66 631 aa13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 RAD17O75943 681 aa13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 DGKZQ13574 1117 aa13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 SLC10A5Q5PT55 438 aa13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 PPP1R42Q7Z4L9 355 aa13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 PNISRQ8TF01 805 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 VPS33BQ9H267 617 aa13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 THSD7BQ9C0I4 1608 aa13.42□□□□□ -0.26
NPLOC4-220ENST00000576940 RIC1Q4ADV7 1423 aa13.41□□□□□ -0.26
NPLOC4-220ENST00000576940 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
NPLOC4-220ENST00000576940 RTFDC1Q9BY42 306 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-220ENST00000576940 ABCC4O15439 1325 aa13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 CA12O43570 354 aa13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 DPP8Q6V1X1 898 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 CDC37L1Q7L3B6 337 aa13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 SP8Q8IXZ3 490 aa13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 MPNDQ8N594 471 aa13.4□□□□□ -0.26
NPLOC4-220ENST00000576940 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms