RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 FAM177BA6PVY3 158 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 TOMM70O94826 608 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 GTF2E1P29083 439 aaPredicted RBP13.72□□□□□ -0.21
LITAF-216ENST00000574848 HOXA10P31260 410 aaPredicted RBP13.72□□□□□ -0.21
LITAF-216ENST00000574848 ERFEQ4G0M1 354 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 CCDC93Q567U6 631 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 COPS6Q7L5N1 327 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 XAGE3Q8WTP9 111 aa13.72□□□□□ -0.21
LITAF-216ENST00000574848 DBF4Q9UBU7 674 aaPredicted RBP13.72□□□□□ -0.21
LITAF-216ENST00000574848 DDX60Q8IY21 1712 aaKnown RBP13.71□□□□□ -0.21
LITAF-216ENST00000574848 GLTPD2A6NH11 291 aa13.71□□□□□ -0.21
LITAF-216ENST00000574848 ALDH1B1P30837 517 aa13.71□□□□□ -0.21
LITAF-216ENST00000574848 DUSP27Q5VZP5 1158 aa13.71□□□□□ -0.21
LITAF-216ENST00000574848 HSPA6P17066 643 aa13.7□□□□□ -0.22
LITAF-216ENST00000574848 SLC10A5Q5PT55 438 aa13.7□□□□□ -0.22
LITAF-216ENST00000574848 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
LITAF-216ENST00000574848 NECTIN2Q92692 538 aa13.7□□□□□ -0.22
LITAF-216ENST00000574848 FKBP4Q02790 459 aaKnown RBP eCLIP13.69□□□□□ -0.22
LITAF-216ENST00000574848 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
LITAF-216ENST00000574848 PLBD2Q8NHP8 589 aa13.69□□□□□ -0.22
LITAF-216ENST00000574848 RBM46Q8TBY0 533 aaKnown RBP13.69□□□□□ -0.22
LITAF-216ENST00000574848 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
LITAF-216ENST00000574848 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
LITAF-216ENST00000574848 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
LITAF-216ENST00000574848 LRRC37AA6NMS7 1700 aa13.69□□□□□ -0.22
LITAF-216ENST00000574848 CEP350Q5VT06 3117 aa13.69□□□□□ -0.22
LITAF-216ENST00000574848 IL16Q14005 1332 aa13.68□□□□□ -0.22
LITAF-216ENST00000574848 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
LITAF-216ENST00000574848 AIMP1Q12904 312 aaKnown RBP13.68□□□□□ -0.22
LITAF-216ENST00000574848 CC2D2BQ6DHV5 1058 aa13.68□□□□□ -0.22
LITAF-216ENST00000574848 RTKN2Q8IZC4 609 aa13.68□□□□□ -0.22
LITAF-216ENST00000574848 CRAMP1Q96RY5 1269 aa13.68□□□□□ -0.22
LITAF-216ENST00000574848 GRIPAP1Q4V328 841 aa13.67□□□□□ -0.22
LITAF-216ENST00000574848 C3orf67Q6ZVT6 689 aa13.67□□□□□ -0.22
LITAF-216ENST00000574848 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
LITAF-216ENST00000574848 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
LITAF-216ENST00000574848 PSMD1Q99460 953 aa13.67□□□□□ -0.22
LITAF-216ENST00000574848 ISCA1Q9BUE6 129 aa13.67□□□□□ -0.22
LITAF-216ENST00000574848 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
LITAF-216ENST00000574848 FSTL1Q12841 308 aa13.66□□□□□ -0.22
LITAF-216ENST00000574848 ANKRD13DQ6ZTN6 518 aa13.66□□□□□ -0.22
LITAF-216ENST00000574848 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
LITAF-216ENST00000574848 RBM17Q96I25 401 aaKnown RBP13.66□□□□□ -0.22
LITAF-216ENST00000574848 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
LITAF-216ENST00000574848 CHMP4AQ9BY43 222 aa13.66□□□□□ -0.22
LITAF-216ENST00000574848 SCN4AP35499 1836 aa13.66□□□□□ -0.22
LITAF-216ENST00000574848 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
LITAF-216ENST00000574848 TRIM28Q13263 835 aaKnown RBP13.65□□□□□ -0.22
LITAF-216ENST00000574848 OLFM4Q6UX06 510 aa13.65□□□□□ -0.22
LITAF-216ENST00000574848 RRAGCQ9HB90 399 aa13.65□□□□□ -0.22
LITAF-216ENST00000574848 COL4A5P29400 1685 aa13.65□□□□□ -0.22
LITAF-216ENST00000574848 ABCC4O15439 1325 aa13.64□□□□□ -0.23
LITAF-216ENST00000574848 POTECB2RU33 542 aa13.64□□□□□ -0.23
LITAF-216ENST00000574848 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
LITAF-216ENST00000574848 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
LITAF-216ENST00000574848 C16orf71Q8IYS4 520 aaPredicted RBP13.64□□□□□ -0.23
LITAF-216ENST00000574848 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
LITAF-216ENST00000574848 DUOX1Q9NRD9 1551 aa13.63□□□□□ -0.23
LITAF-216ENST00000574848 NEFLP07196 543 aa13.63□□□□□ -0.23
LITAF-216ENST00000574848 IARSP41252 1262 aaKnown RBP13.63□□□□□ -0.23
LITAF-216ENST00000574848 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
LITAF-216ENST00000574848 CCDC30Q5VVM6 783 aa13.63□□□□□ -0.23
LITAF-216ENST00000574848 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
LITAF-216ENST00000574848 L3MBTL3Q96JM7 780 aaPredicted RBP13.63□□□□□ -0.23
LITAF-216ENST00000574848 ZNF277Q9NRM2 450 aaPredicted RBP13.63□□□□□ -0.23
LITAF-216ENST00000574848 LTBP1Q14766 1721 aa13.63□□□□□ -0.23
LITAF-216ENST00000574848 ADAMTSL1Q8N6G6 1762 aa13.63□□□□□ -0.23
LITAF-216ENST00000574848 CACNA1FO60840 1977 aa13.62□□□□□ -0.23
LITAF-216ENST00000574848 APLP1P51693 650 aa13.62□□□□□ -0.23
LITAF-216ENST00000574848 SYNE4Q8N205 404 aa13.62□□□□□ -0.23
LITAF-216ENST00000574848 SMC1BQ8NDV3 1235 aa13.62□□□□□ -0.23
LITAF-216ENST00000574848 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
LITAF-216ENST00000574848 PHAXQ9H814 394 aaKnown RBP13.62□□□□□ -0.23
LITAF-216ENST00000574848 ATP6V0A2Q9Y487 856 aa13.62□□□□□ -0.23
LITAF-216ENST00000574848 COL4A1P02462 1669 aa13.61□□□□□ -0.23
LITAF-216ENST00000574848 FZD9O00144 591 aa13.61□□□□□ -0.23
LITAF-216ENST00000574848 ELL2O00472 640 aaPredicted RBP13.61□□□□□ -0.23
LITAF-216ENST00000574848 HCLS1P14317 486 aaPredicted RBP13.61□□□□□ -0.23
LITAF-216ENST00000574848 WDR63Q8IWG1 891 aa13.61□□□□□ -0.23
LITAF-216ENST00000574848 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
LITAF-216ENST00000574848 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
LITAF-216ENST00000574848 ATP5J2-PTCD1G3V325 749 aa13.6□□□□□ -0.23
LITAF-216ENST00000574848 BBOX1O75936 387 aa13.6□□□□□ -0.23
LITAF-216ENST00000574848 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
LITAF-216ENST00000574848 TAF1P21675 1872 aa13.6□□□□□ -0.23
LITAF-216ENST00000574848 GRAPQ13588 217 aa13.6□□□□□ -0.23
LITAF-216ENST00000574848 SF3B3Q15393 1217 aaKnown RBP13.6□□□□□ -0.23
LITAF-216ENST00000574848 TMC4Q7Z404 712 aa13.6□□□□□ -0.23
LITAF-216ENST00000574848 RIC3Q7Z5B4 369 aa13.6□□□□□ -0.23
LITAF-216ENST00000574848 SLC51AQ86UW1 340 aa13.6□□□□□ -0.23
LITAF-216ENST00000574848 GRAPLQ8TC17 118 aaPredicted RBP13.6□□□□□ -0.23
LITAF-216ENST00000574848 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
LITAF-216ENST00000574848 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
LITAF-216ENST00000574848 DDX58O95786 925 aaKnown RBP13.59□□□□□ -0.23
LITAF-216ENST00000574848 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
LITAF-216ENST00000574848 CCDC191Q8NCU4 936 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms