RNA–Protein interactions for RNA: ENST00000573990.1

SPNS2-207, Transcript of sphingolipid transporter 2, humanhuman

TSL 3

Gene SPNS2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-207ENST00000573990 C3orf67Q6ZVT6 689 aa25.17■■□□□ 1.62
SPNS2-207ENST00000573990 NLRP10Q86W26 655 aa25.17■■□□□ 1.62
SPNS2-207ENST00000573990 C7orf43Q8WVR3 580 aa25.17■■□□□ 1.62
SPNS2-207ENST00000573990 UTP14AQ9BVJ6 771 aaKnown RBP25.17■■□□□ 1.62
SPNS2-207ENST00000573990 PHAXQ9H814 394 aaKnown RBP25.17■■□□□ 1.62
SPNS2-207ENST00000573990 IBTKQ9P2D0 1353 aaPredicted RBP25.17■■□□□ 1.62
SPNS2-207ENST00000573990 LMNB1P20700 586 aa25.16■■□□□ 1.62
SPNS2-207ENST00000573990 SYNE4Q8N205 404 aa25.16■■□□□ 1.62
SPNS2-207ENST00000573990 PLBD2Q8NHP8 589 aa25.16■■□□□ 1.62
SPNS2-207ENST00000573990 ZNF521Q96K83 1311 aa25.15■■□□□ 1.62
SPNS2-207ENST00000573990 CRY2Q49AN0 593 aa25.15■■□□□ 1.62
SPNS2-207ENST00000573990 HSP90AB3PQ58FF7 597 aa25.15■■□□□ 1.62
SPNS2-207ENST00000573990 TCERG1O14776 1098 aaKnown RBP25.14■■□□□ 1.62
SPNS2-207ENST00000573990 CHMP4AQ9BY43 222 aa25.14■■□□□ 1.62
SPNS2-207ENST00000573990 NMRK2Q9NPI5 230 aa25.14■■□□□ 1.62
SPNS2-207ENST00000573990 ARFGEF2Q9Y6D5 1785 aa25.13■■□□□ 1.61
SPNS2-207ENST00000573990 ATP5J2-PTCD1G3V325 749 aa25.13■■□□□ 1.61
SPNS2-207ENST00000573990 KIF3CO14782 793 aa25.13■■□□□ 1.61
SPNS2-207ENST00000573990 MYH16Q9H6N6 1097 aa25.13■■□□□ 1.61
SPNS2-207ENST00000573990 ANKRD36CQ5JPF3 1778 aa25.13■■□□□ 1.61
SPNS2-207ENST00000573990 CCDC88AQ3V6T2 1871 aa25.13■■□□□ 1.61
SPNS2-207ENST00000573990 GOLGA2Q08379 1002 aa25.12■■□□□ 1.61
SPNS2-207ENST00000573990 SLC10A5Q5PT55 438 aa25.12■■□□□ 1.61
SPNS2-207ENST00000573990 FER1L6Q2WGJ9 1857 aa25.12■■□□□ 1.61
SPNS2-207ENST00000573990 HCLS1P14317 486 aaPredicted RBP25.11■■□□□ 1.61
SPNS2-207ENST00000573990 ALDH1B1P30837 517 aa25.11■■□□□ 1.61
SPNS2-207ENST00000573990 HNRNPUQ00839 825 aaKnown RBP eCLIP25.11■■□□□ 1.61
SPNS2-207ENST00000573990 SLC51AQ86UW1 340 aa25.11■■□□□ 1.61
SPNS2-207ENST00000573990 RPGRQ92834 1020 aaKnown RBP25.11■■□□□ 1.61
SPNS2-207ENST00000573990 TRMT112Q9UI30 125 aaKnown RBP25.11■■□□□ 1.61
SPNS2-207ENST00000573990 CCDC30Q5VVM6 783 aa25.1■■□□□ 1.61
SPNS2-207ENST00000573990 ISCA1Q9BUE6 129 aa25.1■■□□□ 1.61
SPNS2-207ENST00000573990 TAOK3Q9H2K8 898 aa25.1■■□□□ 1.61
SPNS2-207ENST00000573990 RIC1Q4ADV7 1423 aa25.1■■□□□ 1.61
SPNS2-207ENST00000573990 HOXA10P31260 410 aaPredicted RBP25.09■■□□□ 1.61
SPNS2-207ENST00000573990 CCDC93Q567U6 631 aa25.09■■□□□ 1.61
SPNS2-207ENST00000573990 RIC3Q7Z5B4 369 aa25.09■■□□□ 1.61
SPNS2-207ENST00000573990 NLRP3Q96P20 1036 aa25.09■■□□□ 1.61
SPNS2-207ENST00000573990 SPINK5Q9NQ38 1064 aaPredicted RBP25.09■■□□□ 1.61
SPNS2-207ENST00000573990 E9PSI1 815 aa25.08■■□□□ 1.61
SPNS2-207ENST00000573990 TWISTNBQ3B726 338 aaPredicted RBP25.08■■□□□ 1.61
SPNS2-207ENST00000573990 SOGA3Q5TF21 947 aa25.08■■□□□ 1.61
SPNS2-207ENST00000573990 LTBP3Q9NS15 1303 aa25.08■■□□□ 1.6
SPNS2-207ENST00000573990 FANCIQ9NVI1 1328 aa25.08■■□□□ 1.6
SPNS2-207ENST00000573990 RBM17Q96I25 401 aaKnown RBP25.07■■□□□ 1.6
SPNS2-207ENST00000573990 CRAMP1Q96RY5 1269 aa25.06■■□□□ 1.6
SPNS2-207ENST00000573990 RRAGCQ9HB90 399 aa25.06■■□□□ 1.6
SPNS2-207ENST00000573990 SH3TC1Q8TE82 1336 aa25.06■■□□□ 1.6
SPNS2-207ENST00000573990 RTL5Q5HYW3 569 aaPredicted RBP25.05■■□□□ 1.6
SPNS2-207ENST00000573990 FAM89AQ96GI7 184 aa25.05■■□□□ 1.6
SPNS2-207ENST00000573990 RNF123Q5XPI4 1314 aa25.05■■□□□ 1.6
SPNS2-207ENST00000573990 KDM2BQ8NHM5 1336 aa25.05■■□□□ 1.6
SPNS2-207ENST00000573990 EXOSC9Q06265 439 aaKnown RBP25.04■■□□□ 1.6
SPNS2-207ENST00000573990 G2E3Q7L622 706 aa25.04■■□□□ 1.6
SPNS2-207ENST00000573990 MYD88Q99836 296 aa25.04■■□□□ 1.6
SPNS2-207ENST00000573990 ZNF277Q9NRM2 450 aaPredicted RBP25.04■■□□□ 1.6
SPNS2-207ENST00000573990 ZBED9Q6R2W3 1325 aa25.04■■□□□ 1.6
SPNS2-207ENST00000573990 CACNA1FO60840 1977 aa25.04■■□□□ 1.6
SPNS2-207ENST00000573990 TIAM2Q8IVF5 1701 aa25.03■■□□□ 1.6
SPNS2-207ENST00000573990 FKBP4Q02790 459 aaKnown RBP eCLIP25.03■■□□□ 1.6
SPNS2-207ENST00000573990 GLTPD2A6NH11 291 aa25.02■■□□□ 1.6
SPNS2-207ENST00000573990 PPEF1O14829 653 aaPredicted RBP25.02■■□□□ 1.6
SPNS2-207ENST00000573990 TRIM28Q13263 835 aaKnown RBP25.02■■□□□ 1.6
SPNS2-207ENST00000573990 RTKN2Q8IZC4 609 aa25.02■■□□□ 1.6
SPNS2-207ENST00000573990 STK31Q9BXU1 1019 aa25.02■■□□□ 1.6
SPNS2-207ENST00000573990 ZC3H4Q9UPT8 1303 aaKnown RBP25.02■■□□□ 1.6
SPNS2-207ENST00000573990 LAMB2P55268 1798 aa25.02■■□□□ 1.6
SPNS2-207ENST00000573990 SLC4A2P04920 1241 aa25.01■■□□□ 1.59
SPNS2-207ENST00000573990 SLFN5Q08AF3 891 aa25.01■■□□□ 1.59
SPNS2-207ENST00000573990 JARID2Q92833 1246 aaPredicted RBP25.01■■□□□ 1.59
SPNS2-207ENST00000573990 ABCC4O15439 1325 aa25.01■■□□□ 1.59
SPNS2-207ENST00000573990 VAMP4O75379 141 aa25■■□□□ 1.59
SPNS2-207ENST00000573990 METTL22Q9BUU2 404 aaPredicted RBP25■■□□□ 1.59
SPNS2-207ENST00000573990 MAP3K2Q9Y2U5 619 aa25■■□□□ 1.59
SPNS2-207ENST00000573990 DICER1Q9UPY3 1922 aaKnown RBP25■■□□□ 1.59
SPNS2-207ENST00000573990 DDX58O95786 925 aaKnown RBP24.99■■□□□ 1.59
SPNS2-207ENST00000573990 SNED1Q8TER0 1413 aa24.99■■□□□ 1.59
SPNS2-207ENST00000573990 PI4KAP2A4QPH2 592 aa24.98■■□□□ 1.59
SPNS2-207ENST00000573990 KSR2Q6VAB6 950 aa24.98■■□□□ 1.59
SPNS2-207ENST00000573990 PI4KAP1Q8N8J0 262 aa24.98■■□□□ 1.59
SPNS2-207ENST00000573990 DDX60Q8IY21 1712 aaKnown RBP24.98■■□□□ 1.59
SPNS2-207ENST00000573990 TOMM70O94826 608 aa24.97■■□□□ 1.59
SPNS2-207ENST00000573990 TRMT2AQ8IZ69 625 aaKnown RBP24.97■■□□□ 1.59
SPNS2-207ENST00000573990 POTECB2RU33 542 aa24.96■■□□□ 1.59
SPNS2-207ENST00000573990 IRS4O14654 1257 aaPredicted RBP24.96■■□□□ 1.59
SPNS2-207ENST00000573990 CC2D2BQ6DHV5 1058 aa24.96■■□□□ 1.59
SPNS2-207ENST00000573990 DPY19L2Q6NUT2 758 aa24.96■■□□□ 1.59
SPNS2-207ENST00000573990 DDX46Q7L014 1031 aaKnown RBP24.96■■□□□ 1.59
SPNS2-207ENST00000573990 ATP6V0A2Q9Y487 856 aa24.96■■□□□ 1.59
SPNS2-207ENST00000573990 TAF1P21675 1872 aa24.96■■□□□ 1.59
SPNS2-207ENST00000573990 DDNO94850 711 aaPredicted RBP24.95■■□□□ 1.58
SPNS2-207ENST00000573990 IARSP41252 1262 aaKnown RBP24.95■■□□□ 1.58
SPNS2-207ENST00000573990 C16orf71Q8IYS4 520 aaPredicted RBP24.95■■□□□ 1.58
SPNS2-207ENST00000573990 ZBTB38Q8NAP3 1195 aaPredicted RBP24.95■■□□□ 1.58
SPNS2-207ENST00000573990 PSMD1Q99460 953 aa24.95■■□□□ 1.58
SPNS2-207ENST00000573990 IGKV5-2P06315 115 aa24.94■■□□□ 1.58
SPNS2-207ENST00000573990 CT47B1P0C2W7 299 aaPredicted RBP24.94■■□□□ 1.58
SPNS2-207ENST00000573990 CCDC191Q8NCU4 936 aa24.94■■□□□ 1.58
SPNS2-207ENST00000573990 CWC25Q9NXE8 425 aaPredicted RBP24.94■■□□□ 1.58
SPNS2-207ENST00000573990 BBOX1O75936 387 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms