RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 ST5P78524 1137 aa12.09□□□□□ -0.47
NDE1-208ENST00000573694 AAMPQ13685 434 aa12.09□□□□□ -0.47
NDE1-208ENST00000573694 STYK1Q6J9G0 422 aa12.09□□□□□ -0.47
NDE1-208ENST00000573694 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
NDE1-208ENST00000573694 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
NDE1-208ENST00000573694 F6X3S4 739 aa12.08□□□□□ -0.48
NDE1-208ENST00000573694 A1BGP04217 495 aa12.08□□□□□ -0.48
NDE1-208ENST00000573694 HOXB7P09629 217 aa12.08□□□□□ -0.48
NDE1-208ENST00000573694 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
NDE1-208ENST00000573694 ZBTB40Q9NUA8 1239 aa12.08□□□□□ -0.48
NDE1-208ENST00000573694 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
NDE1-208ENST00000573694 USP16Q9Y5T5 823 aa12.08□□□□□ -0.48
NDE1-208ENST00000573694 ANXA1P04083 346 aa12.07□□□□□ -0.48
NDE1-208ENST00000573694 LMNB1P20700 586 aa12.07□□□□□ -0.48
NDE1-208ENST00000573694 FLIIQ13045 1269 aa12.07□□□□□ -0.48
NDE1-208ENST00000573694 CNBD1Q8NA66 436 aa12.07□□□□□ -0.48
NDE1-208ENST00000573694 NYXQ9GZU5 481 aa12.07□□□□□ -0.48
NDE1-208ENST00000573694 C1orf115Q9H7X2 142 aa12.07□□□□□ -0.48
NDE1-208ENST00000573694 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
NDE1-208ENST00000573694 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
NDE1-208ENST00000573694 ZBTB7BO15156 539 aaPredicted RBP12.06□□□□□ -0.48
NDE1-208ENST00000573694 FSTL1Q12841 308 aa12.06□□□□□ -0.48
NDE1-208ENST00000573694 TBC1D9BQ66K14 1250 aa12.06□□□□□ -0.48
NDE1-208ENST00000573694 INTS3Q68E01 1043 aaKnown RBP12.06□□□□□ -0.48
NDE1-208ENST00000573694 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
NDE1-208ENST00000573694 C2CD5Q86YS7 1000 aa12.06□□□□□ -0.48
NDE1-208ENST00000573694 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
NDE1-208ENST00000573694 MASTLQ96GX5 879 aa12.06□□□□□ -0.48
NDE1-208ENST00000573694 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
NDE1-208ENST00000573694 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
NDE1-208ENST00000573694 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
NDE1-208ENST00000573694 HSPA6P17066 643 aa12.05□□□□□ -0.48
NDE1-208ENST00000573694 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
NDE1-208ENST00000573694 FKBP5Q13451 457 aaPredicted RBP12.05□□□□□ -0.48
NDE1-208ENST00000573694 PROSER3Q2NL68 480 aa12.05□□□□□ -0.48
NDE1-208ENST00000573694 C9orf131Q5VYM1 1079 aa12.05□□□□□ -0.48
NDE1-208ENST00000573694 PRR5LQ6MZQ0 368 aa12.05□□□□□ -0.48
NDE1-208ENST00000573694 CEP350Q5VT06 3117 aa12.04□□□□□ -0.48
NDE1-208ENST00000573694 KIF3CO14782 793 aa12.04□□□□□ -0.48
NDE1-208ENST00000573694 NPHP1O15259 732 aa12.04□□□□□ -0.48
NDE1-208ENST00000573694 SRGNP10124 158 aa12.04□□□□□ -0.48
NDE1-208ENST00000573694 NPR1P16066 1061 aa12.04□□□□□ -0.48
NDE1-208ENST00000573694 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
NDE1-208ENST00000573694 SLC4A10Q6U841 1118 aa12.04□□□□□ -0.48
NDE1-208ENST00000573694 NBPF5PQ86XG9 351 aaPredicted RBP12.04□□□□□ -0.48
NDE1-208ENST00000573694 RIC1Q4ADV7 1423 aa12.03□□□□□ -0.48
NDE1-208ENST00000573694 CHRNA5P30532 468 aa12.03□□□□□ -0.48
NDE1-208ENST00000573694 APLP1P51693 650 aa12.03□□□□□ -0.48
NDE1-208ENST00000573694 PARP10Q53GL7 1025 aa12.03□□□□□ -0.48
NDE1-208ENST00000573694 MEIS3Q99687 375 aa12.03□□□□□ -0.48
NDE1-208ENST00000573694 RWDD1Q9H446 243 aaPredicted RBP12.03□□□□□ -0.48
NDE1-208ENST00000573694 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
NDE1-208ENST00000573694 DLEC1Q9Y238 1755 aa12.02□□□□□ -0.48
NDE1-208ENST00000573694 GLTPD2A6NH11 291 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 RGS3P49796 1198 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 HDAC1Q13547 482 aaPredicted RBP12.02□□□□□ -0.49
NDE1-208ENST00000573694 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 NBPF10Q6P3W6 841 aaKnown RBP12.02□□□□□ -0.49
NDE1-208ENST00000573694 KIF6Q6ZMV9 814 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 C16orf71Q8IYS4 520 aaPredicted RBP12.02□□□□□ -0.49
NDE1-208ENST00000573694 RTKN2Q8IZC4 609 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 NBPF15Q8N660 670 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 RNF181Q9P0P0 153 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.49
NDE1-208ENST00000573694 MAP3K15Q6ZN16 1313 aa12.02□□□□□ -0.49
NDE1-208ENST00000573694 VEGFAP15692 232 aaPredicted RBP12.01□□□□□ -0.49
NDE1-208ENST00000573694 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
NDE1-208ENST00000573694 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
NDE1-208ENST00000573694 BICDL1Q6ZP65 573 aa12.01□□□□□ -0.49
NDE1-208ENST00000573694 VPS33BQ9H267 617 aa12.01□□□□□ -0.49
NDE1-208ENST00000573694 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
NDE1-208ENST00000573694 HOXA10P31260 410 aaPredicted RBP12□□□□□ -0.49
NDE1-208ENST00000573694 PDIA6Q15084 440 aa12□□□□□ -0.49
NDE1-208ENST00000573694 CRY2Q49AN0 593 aa12□□□□□ -0.49
NDE1-208ENST00000573694 GIGYF2Q6Y7W6 1299 aaKnown RBP12□□□□□ -0.49
NDE1-208ENST00000573694 PPP1R42Q7Z4L9 355 aa12□□□□□ -0.49
NDE1-208ENST00000573694 SIRT2Q8IXJ6 389 aa12□□□□□ -0.49
NDE1-208ENST00000573694 C7orf43Q8WVR3 580 aa12□□□□□ -0.49
NDE1-208ENST00000573694 ZNF622Q969S3 477 aaKnown RBP eCLIP12□□□□□ -0.49
NDE1-208ENST00000573694 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
NDE1-208ENST00000573694 DBF4Q9UBU7 674 aaPredicted RBP12□□□□□ -0.49
NDE1-208ENST00000573694 SBF1O95248 1867 aa12□□□□□ -0.49
NDE1-208ENST00000573694 GTF2E1P29083 439 aaPredicted RBP11.99□□□□□ -0.49
NDE1-208ENST00000573694 PIP4K2AP48426 406 aaPredicted RBP11.99□□□□□ -0.49
NDE1-208ENST00000573694 SLC10A5Q5PT55 438 aa11.99□□□□□ -0.49
NDE1-208ENST00000573694 TAOK3Q9H2K8 898 aa11.99□□□□□ -0.49
NDE1-208ENST00000573694 BCORQ6W2J9 1755 aa11.99□□□□□ -0.49
NDE1-208ENST00000573694 HSP90B1P14625 803 aaKnown RBP11.98□□□□□ -0.49
NDE1-208ENST00000573694 CCDC93Q567U6 631 aa11.98□□□□□ -0.49
NDE1-208ENST00000573694 PRPF40BQ6NWY9 871 aaKnown RBP11.98□□□□□ -0.49
NDE1-208ENST00000573694 SMC5Q8IY18 1101 aa11.98□□□□□ -0.49
NDE1-208ENST00000573694 ZNF34Q8IZ26 560 aa11.98□□□□□ -0.49
NDE1-208ENST00000573694 SMC1BQ8NDV3 1235 aa11.98□□□□□ -0.49
NDE1-208ENST00000573694 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
NDE1-208ENST00000573694 CRAMP1Q96RY5 1269 aa11.98□□□□□ -0.49
NDE1-208ENST00000573694 DDX21Q9NR30 783 aaKnown RBP eCLIP11.98□□□□□ -0.49
NDE1-208ENST00000573694 PI4KAP2A4QPH2 592 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 NFKBIEO00221 500 aa11.97□□□□□ -0.49
NDE1-208ENST00000573694 MYL6BP14649 208 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms