RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 PPP1R42Q7Z4L9 355 aa25.31■■□□□ 1.64
HCFC1R1-204ENST00000573095 JMYQ8N9B5 988 aa25.31■■□□□ 1.64
HCFC1R1-204ENST00000573095 TRIM35Q9UPQ4 493 aa25.31■■□□□ 1.64
HCFC1R1-204ENST00000573095 IQCA1LA6NCM1 817 aa25.3■■□□□ 1.64
HCFC1R1-204ENST00000573095 CHL1O00533 1208 aa25.3■■□□□ 1.64
HCFC1R1-204ENST00000573095 ANXA1P04083 346 aa25.3■■□□□ 1.64
HCFC1R1-204ENST00000573095 IARSP41252 1262 aaKnown RBP25.3■■□□□ 1.64
HCFC1R1-204ENST00000573095 PSMD1Q99460 953 aa25.3■■□□□ 1.64
HCFC1R1-204ENST00000573095 ZNF541Q9H0D2 1346 aa25.3■■□□□ 1.64
HCFC1R1-204ENST00000573095 IFFO2Q5TF58 517 aa25.29■■□□□ 1.64
HCFC1R1-204ENST00000573095 PRKRIP1Q9H875 184 aaPredicted RBP25.29■■□□□ 1.64
HCFC1R1-204ENST00000573095 RNF123Q5XPI4 1314 aa25.29■■□□□ 1.64
HCFC1R1-204ENST00000573095 SYNE4Q8N205 404 aa25.28■■□□□ 1.64
HCFC1R1-204ENST00000573095 CRAMP1Q96RY5 1269 aa25.28■■□□□ 1.64
HCFC1R1-204ENST00000573095 ADAMTS8Q9UP79 889 aa25.28■■□□□ 1.64
HCFC1R1-204ENST00000573095 ADAMTSL1Q8N6G6 1762 aa25.28■■□□□ 1.64
HCFC1R1-204ENST00000573095 HSP90AB3PQ58FF7 597 aa25.27■■□□□ 1.64
HCFC1R1-204ENST00000573095 CHADLQ6NUI6 762 aa25.27■■□□□ 1.64
HCFC1R1-204ENST00000573095 COL4A5P29400 1685 aa25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 FZD9O00144 591 aa25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 KRT24Q2M2I5 525 aa25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 GRIPAP1Q4V328 841 aa25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 C3orf67Q6ZVT6 689 aa25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 COPS6Q7L5N1 327 aa25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 NECTIN2Q92692 538 aa25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 RBM17Q96I25 401 aaKnown RBP25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 UTP14AQ9BVJ6 771 aaKnown RBP25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 DDX21Q9NR30 783 aaKnown RBP eCLIP25.26■■□□□ 1.63
HCFC1R1-204ENST00000573095 HOXB7P09629 217 aa25.25■■□□□ 1.63
HCFC1R1-204ENST00000573095 POTEIP0CG38 1075 aa25.25■■□□□ 1.63
HCFC1R1-204ENST00000573095 POTEJP0CG39 1038 aa25.25■■□□□ 1.63
HCFC1R1-204ENST00000573095 XAGE3Q8WTP9 111 aa25.25■■□□□ 1.63
HCFC1R1-204ENST00000573095 PPEF1O14829 653 aaPredicted RBP25.24■■□□□ 1.63
HCFC1R1-204ENST00000573095 SLC10A5Q5PT55 438 aa25.24■■□□□ 1.63
HCFC1R1-204ENST00000573095 NLRP3Q96P20 1036 aa25.24■■□□□ 1.63
HCFC1R1-204ENST00000573095 TAF1DQ9H5J8 278 aaPredicted RBP25.24■■□□□ 1.63
HCFC1R1-204ENST00000573095 LDHDQ86WU2 507 aa25.23■■□□□ 1.63
HCFC1R1-204ENST00000573095 LAS1LQ9Y4W2 734 aaKnown RBP25.23■■□□□ 1.63
HCFC1R1-204ENST00000573095 AIMP1Q12904 312 aaKnown RBP25.22■■□□□ 1.63
HCFC1R1-204ENST00000573095 NLRP10Q86W26 655 aa25.22■■□□□ 1.63
HCFC1R1-204ENST00000573095 CHPF2Q9P2E5 772 aa25.22■■□□□ 1.63
HCFC1R1-204ENST00000573095 DDX60Q8IY21 1712 aaKnown RBP25.22■■□□□ 1.63
HCFC1R1-204ENST00000573095 TCIRG1Q13488 830 aa25.21■■□□□ 1.63
HCFC1R1-204ENST00000573095 HDGFL1Q5TGJ6 251 aa25.21■■□□□ 1.63
HCFC1R1-204ENST00000573095 JDP2Q8WYK2 163 aa25.21■■□□□ 1.63
HCFC1R1-204ENST00000573095 CFAP44Q96MT7 982 aa25.21■■□□□ 1.63
HCFC1R1-204ENST00000573095 ABCC4O15439 1325 aa25.2■■□□□ 1.62
HCFC1R1-204ENST00000573095 GPC2Q8N158 579 aa25.2■■□□□ 1.62
HCFC1R1-204ENST00000573095 HACL1Q9UJ83 578 aa25.2■■□□□ 1.62
HCFC1R1-204ENST00000573095 SLC51AQ86UW1 340 aa25.19■■□□□ 1.62
HCFC1R1-204ENST00000573095 LRRC37AA6NMS7 1700 aa25.18■■□□□ 1.62
HCFC1R1-204ENST00000573095 LTBP1Q14766 1721 aa25.18■■□□□ 1.62
HCFC1R1-204ENST00000573095 CREBZFQ9NS37 354 aa25.18■■□□□ 1.62
HCFC1R1-204ENST00000573095 DBF4Q9UBU7 674 aaPredicted RBP25.18■■□□□ 1.62
HCFC1R1-204ENST00000573095 ATP6V0A2Q9Y487 856 aa25.18■■□□□ 1.62
HCFC1R1-204ENST00000573095 SH3TC1Q8TE82 1336 aa25.17■■□□□ 1.62
HCFC1R1-204ENST00000573095 PASKQ96RG2 1323 aa25.17■■□□□ 1.62
HCFC1R1-204ENST00000573095 EPHX2P34913 555 aa25.17■■□□□ 1.62
HCFC1R1-204ENST00000573095 MBIPQ9NS73 344 aa25.17■■□□□ 1.62
HCFC1R1-204ENST00000573095 EIF6P56537 245 aaKnown RBP25.16■■□□□ 1.62
HCFC1R1-204ENST00000573095 LARGE2Q8N3Y3 721 aa25.16■■□□□ 1.62
HCFC1R1-204ENST00000573095 PLBD2Q8NHP8 589 aa25.16■■□□□ 1.62
HCFC1R1-204ENST00000573095 TRMT112Q9UI30 125 aaKnown RBP25.16■■□□□ 1.62
HCFC1R1-204ENST00000573095 TCERG1O14776 1098 aaKnown RBP25.15■■□□□ 1.62
HCFC1R1-204ENST00000573095 ZNF853P0CG23 659 aa25.15■■□□□ 1.62
HCFC1R1-204ENST00000573095 DUSP27Q5VZP5 1158 aa25.15■■□□□ 1.62
HCFC1R1-204ENST00000573095 HCLS1P14317 486 aaPredicted RBP25.14■■□□□ 1.62
HCFC1R1-204ENST00000573095 EAPPQ56P03 285 aaPredicted RBP25.14■■□□□ 1.62
HCFC1R1-204ENST00000573095 PNMA8AQ86V59 439 aaPredicted RBP25.14■■□□□ 1.62
HCFC1R1-204ENST00000573095 TMX4Q9H1E5 349 aaPredicted RBP25.14■■□□□ 1.62
HCFC1R1-204ENST00000573095 IFT57Q9NWB7 429 aa25.14■■□□□ 1.62
HCFC1R1-204ENST00000573095 TAF1P21675 1872 aa25.14■■□□□ 1.61
HCFC1R1-204ENST00000573095 APAF1O14727 1248 aa25.13■■□□□ 1.61
HCFC1R1-204ENST00000573095 ANKRD13DQ6ZTN6 518 aa25.13■■□□□ 1.61
HCFC1R1-204ENST00000573095 ISCA1Q9BUE6 129 aa25.13■■□□□ 1.61
HCFC1R1-204ENST00000573095 VPS33BQ9H267 617 aa25.13■■□□□ 1.61
HCFC1R1-204ENST00000573095 HYPKQ9NX55 129 aa25.13■■□□□ 1.61
HCFC1R1-204ENST00000573095 PPIP5K2O43314 1243 aa25.12■■□□□ 1.61
HCFC1R1-204ENST00000573095 BBOX1O75936 387 aa25.12■■□□□ 1.61
HCFC1R1-204ENST00000573095 CALD1Q05682 793 aaKnown RBP25.12■■□□□ 1.61
HCFC1R1-204ENST00000573095 NIM1KQ8IY84 436 aa25.12■■□□□ 1.61
HCFC1R1-204ENST00000573095 RTFDC1Q9BY42 306 aaPredicted RBP25.12■■□□□ 1.61
HCFC1R1-204ENST00000573095 DUOX1Q9NRD9 1551 aa25.11■■□□□ 1.61
HCFC1R1-204ENST00000573095 ITGBL1O95965 494 aaPredicted RBP25.11■■□□□ 1.61
HCFC1R1-204ENST00000573095 GNAI1P63096 354 aa25.11■■□□□ 1.61
HCFC1R1-204ENST00000573095 DDX46Q7L014 1031 aaKnown RBP25.11■■□□□ 1.61
HCFC1R1-204ENST00000573095 SUPT20HQ8NEM7 779 aa25.11■■□□□ 1.61
HCFC1R1-204ENST00000573095 GJA3Q9Y6H8 435 aa25.11■■□□□ 1.61
HCFC1R1-204ENST00000573095 SCNN1DP51172 638 aa25.1■■□□□ 1.61
HCFC1R1-204ENST00000573095 GRAPQ13588 217 aa25.1■■□□□ 1.61
HCFC1R1-204ENST00000573095 SP8Q8IXZ3 490 aa25.1■■□□□ 1.61
HCFC1R1-204ENST00000573095 GRAPLQ8TC17 118 aaPredicted RBP25.1■■□□□ 1.61
HCFC1R1-204ENST00000573095 LMOD1P29536 600 aaPredicted RBP25.09■■□□□ 1.61
HCFC1R1-204ENST00000573095 AOC3Q16853 763 aa25.09■■□□□ 1.61
HCFC1R1-204ENST00000573095 CLEC11AQ9Y240 323 aa25.09■■□□□ 1.61
HCFC1R1-204ENST00000573095 CNTNAP1P78357 1384 aa25.08■■□□□ 1.61
HCFC1R1-204ENST00000573095 PCNTO95613 3336 aa25.08■■□□□ 1.61
HCFC1R1-204ENST00000573095 DPP8Q6V1X1 898 aaPredicted RBP25.08■■□□□ 1.61
HCFC1R1-204ENST00000573095 TMC4Q7Z404 712 aa25.08■■□□□ 1.61
HCFC1R1-204ENST00000573095 HSPA1AP0DMV8 641 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms