RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 AIMP1Q12904 312 aaKnown RBP15.29■□□□□ 0.04
NDE1-206ENST00000572967 SUSD4Q5VX71 490 aa15.29■□□□□ 0.04
NDE1-206ENST00000572967 RBM46Q8TBY0 533 aaKnown RBP15.29■□□□□ 0.04
NDE1-206ENST00000572967 MYH16Q9H6N6 1097 aa15.29■□□□□ 0.04
NDE1-206ENST00000572967 SALL2Q9Y467 1007 aaPredicted RBP15.29■□□□□ 0.04
NDE1-206ENST00000572967 SNED1Q8TER0 1413 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 KLRG2A4D1S0 409 aaPredicted RBP15.28■□□□□ 0.04
NDE1-206ENST00000572967 CHL1O00533 1208 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 GNAI1P63096 354 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 HDGFL1Q5TGJ6 251 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 SLC51AQ86UW1 340 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 ZNF34Q8IZ26 560 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 XAGE3Q8WTP9 111 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 RPGRQ92834 1020 aaKnown RBP15.28■□□□□ 0.04
NDE1-206ENST00000572967 CHPF2Q9P2E5 772 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 TAF1P21675 1872 aa15.28■□□□□ 0.04
NDE1-206ENST00000572967 ZNF521Q96K83 1311 aa15.27■□□□□ 0.04
NDE1-206ENST00000572967 E9PSI1 815 aa15.27■□□□□ 0.04
NDE1-206ENST00000572967 CRY2Q49AN0 593 aa15.27■□□□□ 0.04
NDE1-206ENST00000572967 MBIPQ9NS73 344 aa15.27■□□□□ 0.04
NDE1-206ENST00000572967 IFT57Q9NWB7 429 aa15.27■□□□□ 0.04
NDE1-206ENST00000572967 COL4A5P29400 1685 aa15.27■□□□□ 0.03
NDE1-206ENST00000572967 SCN4AP35499 1836 aa15.27■□□□□ 0.03
NDE1-206ENST00000572967 APLP1P51693 650 aa15.26■□□□□ 0.03
NDE1-206ENST00000572967 FKBP4Q02790 459 aaKnown RBP eCLIP15.26■□□□□ 0.03
NDE1-206ENST00000572967 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
NDE1-206ENST00000572967 COPS6Q7L5N1 327 aa15.26■□□□□ 0.03
NDE1-206ENST00000572967 PPP1R42Q7Z4L9 355 aa15.26■□□□□ 0.03
NDE1-206ENST00000572967 C7orf43Q8WVR3 580 aa15.26■□□□□ 0.03
NDE1-206ENST00000572967 ZNF428Q96B54 188 aa15.26■□□□□ 0.03
NDE1-206ENST00000572967 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
NDE1-206ENST00000572967 LRRC37AA6NMS7 1700 aa15.26■□□□□ 0.03
NDE1-206ENST00000572967 PARP10Q53GL7 1025 aa15.25■□□□□ 0.03
NDE1-206ENST00000572967 DDX21Q9NR30 783 aaKnown RBP eCLIP15.25■□□□□ 0.03
NDE1-206ENST00000572967 ZNF541Q9H0D2 1346 aa15.24■□□□□ 0.03
NDE1-206ENST00000572967 ALDH1B1P30837 517 aa15.24■□□□□ 0.03
NDE1-206ENST00000572967 HTRA3P83110 453 aa15.24■□□□□ 0.03
NDE1-206ENST00000572967 FSTL1Q12841 308 aa15.24■□□□□ 0.03
NDE1-206ENST00000572967 DUSP27Q5VZP5 1158 aa15.24■□□□□ 0.03
NDE1-206ENST00000572967 DPY19L2Q6NUT2 758 aa15.24■□□□□ 0.03
NDE1-206ENST00000572967 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
NDE1-206ENST00000572967 CFAP44Q96MT7 982 aa15.24■□□□□ 0.03
NDE1-206ENST00000572967 UTP14AQ9BVJ6 771 aaKnown RBP15.24■□□□□ 0.03
NDE1-206ENST00000572967 TCERG1O14776 1098 aaKnown RBP15.23■□□□□ 0.03
NDE1-206ENST00000572967 PPEF1O14829 653 aaPredicted RBP15.23■□□□□ 0.03
NDE1-206ENST00000572967 DDNO94850 711 aaPredicted RBP15.23■□□□□ 0.03
NDE1-206ENST00000572967 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
NDE1-206ENST00000572967 HOXB7P09629 217 aa15.23■□□□□ 0.03
NDE1-206ENST00000572967 VEGFAP15692 232 aaPredicted RBP15.23■□□□□ 0.03
NDE1-206ENST00000572967 COL4A1P02462 1669 aa15.22■□□□□ 0.03
NDE1-206ENST00000572967 POTECB2RU33 542 aa15.22■□□□□ 0.03
NDE1-206ENST00000572967 IARSP41252 1262 aaKnown RBP15.22■□□□□ 0.03
NDE1-206ENST00000572967 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
NDE1-206ENST00000572967 RTKN2Q8IZC4 609 aa15.22■□□□□ 0.03
NDE1-206ENST00000572967 CHMP4AQ9BY43 222 aa15.22■□□□□ 0.03
NDE1-206ENST00000572967 LTBP1Q14766 1721 aa15.22■□□□□ 0.03
NDE1-206ENST00000572967 ADAMTSL1Q8N6G6 1762 aa15.21■□□□□ 0.03
NDE1-206ENST00000572967 ABCC4O15439 1325 aa15.21■□□□□ 0.03
NDE1-206ENST00000572967 NLRP10Q86W26 655 aa15.21■□□□□ 0.03
NDE1-206ENST00000572967 RBM17Q96I25 401 aaKnown RBP15.21■□□□□ 0.03
NDE1-206ENST00000572967 SPEF2Q9C093 1822 aa15.21■□□□□ 0.03
NDE1-206ENST00000572967 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
NDE1-206ENST00000572967 DUOX1Q9NRD9 1551 aa15.2■□□□□ 0.02
NDE1-206ENST00000572967 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
NDE1-206ENST00000572967 HCLS1P14317 486 aaPredicted RBP15.2■□□□□ 0.02
NDE1-206ENST00000572967 SYNE4Q8N205 404 aa15.2■□□□□ 0.02
NDE1-206ENST00000572967 NLRP3Q96P20 1036 aa15.2■□□□□ 0.02
NDE1-206ENST00000572967 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
NDE1-206ENST00000572967 ELL2O00472 640 aaPredicted RBP15.19■□□□□ 0.02
NDE1-206ENST00000572967 POTEIP0CG38 1075 aa15.19■□□□□ 0.02
NDE1-206ENST00000572967 POTEJP0CG39 1038 aa15.19■□□□□ 0.02
NDE1-206ENST00000572967 HOXA10P31260 410 aaPredicted RBP15.19■□□□□ 0.02
NDE1-206ENST00000572967 SLFN5Q08AF3 891 aa15.19■□□□□ 0.02
NDE1-206ENST00000572967 TCIRG1Q13488 830 aa15.19■□□□□ 0.02
NDE1-206ENST00000572967 PLBD2Q8NHP8 589 aa15.19■□□□□ 0.02
NDE1-206ENST00000572967 CRAMP1Q96RY5 1269 aa15.19■□□□□ 0.02
NDE1-206ENST00000572967 PSMD1Q99460 953 aa15.19■□□□□ 0.02
NDE1-206ENST00000572967 TRMT112Q9UI30 125 aaKnown RBP15.19■□□□□ 0.02
NDE1-206ENST00000572967 SH3TC1Q8TE82 1336 aa15.18■□□□□ 0.02
NDE1-206ENST00000572967 CT47B1P0C2W7 299 aaPredicted RBP15.18■□□□□ 0.02
NDE1-206ENST00000572967 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
NDE1-206ENST00000572967 MYH3P11055 1940 aa15.17■□□□□ 0.02
NDE1-206ENST00000572967 ATP5J2-PTCD1G3V325 749 aa15.17■□□□□ 0.02
NDE1-206ENST00000572967 TSR2Q969E8 191 aaKnown RBP15.17■□□□□ 0.02
NDE1-206ENST00000572967 HYPKQ9NX55 129 aa15.17■□□□□ 0.02
NDE1-206ENST00000572967 IQCA1LA6NCM1 817 aa15.16■□□□□ 0.02
NDE1-206ENST00000572967 RTL5Q5HYW3 569 aaPredicted RBP15.16■□□□□ 0.02
NDE1-206ENST00000572967 CC2D2BQ6DHV5 1058 aa15.16■□□□□ 0.02
NDE1-206ENST00000572967 ANKRD13DQ6ZTN6 518 aa15.16■□□□□ 0.02
NDE1-206ENST00000572967 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
NDE1-206ENST00000572967 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
NDE1-206ENST00000572967 PHAXQ9H814 394 aaKnown RBP15.16■□□□□ 0.02
NDE1-206ENST00000572967 AOC3Q16853 763 aa15.15■□□□□ 0.02
NDE1-206ENST00000572967 EAPPQ56P03 285 aaPredicted RBP15.15■□□□□ 0.02
NDE1-206ENST00000572967 SLC10A5Q5PT55 438 aa15.15■□□□□ 0.02
NDE1-206ENST00000572967 LARGE2Q8N3Y3 721 aa15.15■□□□□ 0.02
NDE1-206ENST00000572967 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
NDE1-206ENST00000572967 ISCA1Q9BUE6 129 aa15.15■□□□□ 0.02
NDE1-206ENST00000572967 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
NDE1-206ENST00000572967 FZD9O00144 591 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms