RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 GLI3P10071 1580 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 KDM6AO15550 1401 aaPredicted RBP10.84□□□□□ -0.67
TVP23A-205ENST00000572428 CHL1O00533 1208 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 GNAI1P63096 354 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 PUS10Q3MIT2 529 aaKnown RBP10.84□□□□□ -0.67
TVP23A-205ENST00000572428 MFSD4BQ5TF39 518 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 TOM1L2Q6ZVM7 507 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 CICQ96RK0 1608 aaPredicted RBP10.84□□□□□ -0.67
TVP23A-205ENST00000572428 LAMB4A4D0S4 1761 aa10.84□□□□□ -0.67
TVP23A-205ENST00000572428 MPHOSPH10O00566 681 aaKnown RBP10.83□□□□□ -0.67
TVP23A-205ENST00000572428 PLIN1O60240 522 aa10.83□□□□□ -0.67
TVP23A-205ENST00000572428 CSB-PGBD3P0DP91 1061 aa10.83□□□□□ -0.67
TVP23A-205ENST00000572428 SF3A1Q15459 793 aaKnown RBP10.83□□□□□ -0.67
TVP23A-205ENST00000572428 SPG7Q9UQ90 795 aa10.83□□□□□ -0.67
TVP23A-205ENST00000572428 N4BP2Q86UW6 1770 aaPredicted RBP10.83□□□□□ -0.68
TVP23A-205ENST00000572428 IL2RBP14784 551 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 IL17REQ8NFR9 667 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 TNS2Q63HR2 1409 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
TVP23A-205ENST00000572428 EVA1CP58658 441 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 UVSSAQ2YD98 709 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 ACRBPQ8NEB7 543 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 ZCRB1Q8TBF4 217 aaKnown RBP10.83□□□□□ -0.68
TVP23A-205ENST00000572428 PMM1Q92871 262 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 CDCA7Q9BWT1 371 aaPredicted RBP10.83□□□□□ -0.68
TVP23A-205ENST00000572428 GABBR1Q9UBS5 961 aa10.83□□□□□ -0.68
TVP23A-205ENST00000572428 CREB3O43889 395 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 PHKG2P15735 406 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 RBM5P52756 815 aaKnown RBP eCLIP10.82□□□□□ -0.68
TVP23A-205ENST00000572428 UNC5CLQ8IV45 518 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 GPATCH3Q96I76 525 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 ATRNO75882 1429 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 DOT1LQ8TEK3 1739 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 ZNF831Q5JPB2 1677 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 ZRSR2Q15696 482 aaKnown RBP10.82□□□□□ -0.68
TVP23A-205ENST00000572428 VPS72Q15906 364 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 TTC30BQ8N4P2 665 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 PCDH11XQ9BZA7 1347 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 PCDH11YQ9BZA8 1340 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 CCDC172P0C7W6 258 aa10.82□□□□□ -0.68
TVP23A-205ENST00000572428 SBF2Q86WG5 1849 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 COQ9O75208 318 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 ANP32AP39687 249 aaKnown RBP10.81□□□□□ -0.68
TVP23A-205ENST00000572428 FAM13BQ9NYF5 915 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 C5P01031 1676 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 SOS1Q07889 1333 aaPredicted RBP10.81□□□□□ -0.68
TVP23A-205ENST00000572428 RNMTO43148 476 aaKnown RBP10.81□□□□□ -0.68
TVP23A-205ENST00000572428 IGHDP01880 384 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 MS4A1P11836 297 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 PDE3AQ14432 1141 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 ZNF530Q6P9A1 599 aaPredicted RBP10.81□□□□□ -0.68
TVP23A-205ENST00000572428 MCM10Q7L590 875 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 IFNL2Q8IZJ0 200 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 RTF1Q92541 710 aaKnown RBP10.81□□□□□ -0.68
TVP23A-205ENST00000572428 MBIPQ9NS73 344 aa10.81□□□□□ -0.68
TVP23A-205ENST00000572428 CYP27B1O15528 508 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 ADAMTS2O95450 1211 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 PAX7P23759 505 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 CACTIN-AS1Q8N1I8 211 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 HELBQ8NG08 1087 aaPredicted RBP10.8□□□□□ -0.68
TVP23A-205ENST00000572428 MAP7D2Q96T17 732 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 GTPBP4Q9BZE4 634 aaKnown RBP10.8□□□□□ -0.68
TVP23A-205ENST00000572428 STRN4Q9NRL3 753 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 SH3BP5O60239 455 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 HSP90AB1P08238 724 aaKnown RBP10.8□□□□□ -0.68
TVP23A-205ENST00000572428 DCTN1Q14203 1278 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 HEG1Q9ULI3 1381 aa10.8□□□□□ -0.68
TVP23A-205ENST00000572428 THUMPD2Q9BTF0 503 aaKnown RBP10.8□□□□□ -0.68
TVP23A-205ENST00000572428 PUF60Q9UHX1 559 aaKnown RBP10.8□□□□□ -0.68
TVP23A-205ENST00000572428 NUTM2BA6NNL0 878 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-205ENST00000572428 NUTM2EB1AL46 878 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-205ENST00000572428 BDNFP23560 247 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 APLP1P51693 650 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 C1orf141Q5JVX7 400 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 NUTM2AQ8IVF1 878 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-205ENST00000572428 ARPC5LQ9BPX5 153 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 NRBP1Q9UHY1 535 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 FEZ2Q9UHY8 353 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-205ENST00000572428 EXOC5O00471 708 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 C20orf194Q5TEA3 1177 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 CENPQQ7L2Z9 268 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-205ENST00000572428 DCAF5Q96JK2 942 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 MAF1Q9H063 256 aa10.79□□□□□ -0.68
TVP23A-205ENST00000572428 TMX4Q9H1E5 349 aaPredicted RBP10.79□□□□□ -0.68
TVP23A-205ENST00000572428 PARNO95453 639 aaKnown RBP10.78□□□□□ -0.68
TVP23A-205ENST00000572428 TAF7Q15545 349 aaPredicted RBP10.78□□□□□ -0.68
TVP23A-205ENST00000572428 DNAJC21Q5F1R6 531 aaKnown RBP10.78□□□□□ -0.68
TVP23A-205ENST00000572428 SKAP1Q86WV1 359 aa10.78□□□□□ -0.68
TVP23A-205ENST00000572428 BRWD3Q6RI45 1802 aa10.78□□□□□ -0.68
TVP23A-205ENST00000572428 BCL9O00512 1426 aa10.78□□□□□ -0.68
TVP23A-205ENST00000572428 LGR6Q9HBX8 967 aa10.78□□□□□ -0.68
TVP23A-205ENST00000572428 NHSQ6T4R5 1651 aa10.78□□□□□ -0.68
TVP23A-205ENST00000572428 FBXO41Q8TF61 875 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms