RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 TCIRG1Q13488 830 aa18.81■□□□□ 0.6
LITAF-208ENST00000571627 PPP1R42Q7Z4L9 355 aa18.81■□□□□ 0.6
LITAF-208ENST00000571627 PLBD2Q8NHP8 589 aa18.81■□□□□ 0.6
LITAF-208ENST00000571627 PHAXQ9H814 394 aaKnown RBP18.81■□□□□ 0.6
LITAF-208ENST00000571627 HSP90AB3PQ58FF7 597 aa18.8■□□□□ 0.6
LITAF-208ENST00000571627 ANKRD13DQ6ZTN6 518 aa18.8■□□□□ 0.6
LITAF-208ENST00000571627 C3orf67Q6ZVT6 689 aa18.8■□□□□ 0.6
LITAF-208ENST00000571627 NLRP10Q86W26 655 aa18.8■□□□□ 0.6
LITAF-208ENST00000571627 UTP14AQ9BVJ6 771 aaKnown RBP18.8■□□□□ 0.6
LITAF-208ENST00000571627 DICER1Q9UPY3 1922 aaKnown RBP18.8■□□□□ 0.6
LITAF-208ENST00000571627 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
LITAF-208ENST00000571627 TCERG1O14776 1098 aaKnown RBP18.79■□□□□ 0.6
LITAF-208ENST00000571627 CRY2Q49AN0 593 aa18.79■□□□□ 0.6
LITAF-208ENST00000571627 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
LITAF-208ENST00000571627 SYNE4Q8N205 404 aa18.79■□□□□ 0.6
LITAF-208ENST00000571627 DDX60Q8IY21 1712 aaKnown RBP18.78■□□□□ 0.6
LITAF-208ENST00000571627 LMNB1P20700 586 aa18.78■□□□□ 0.6
LITAF-208ENST00000571627 OLFM4Q6UX06 510 aa18.78■□□□□ 0.6
LITAF-208ENST00000571627 ATP5J2-PTCD1G3V325 749 aa18.77■□□□□ 0.6
LITAF-208ENST00000571627 TWISTNBQ3B726 338 aaPredicted RBP18.77■□□□□ 0.6
LITAF-208ENST00000571627 CCDC30Q5VVM6 783 aa18.77■□□□□ 0.6
LITAF-208ENST00000571627 WDR63Q8IWG1 891 aa18.77■□□□□ 0.6
LITAF-208ENST00000571627 C7orf43Q8WVR3 580 aa18.77■□□□□ 0.6
LITAF-208ENST00000571627 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
LITAF-208ENST00000571627 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
LITAF-208ENST00000571627 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
LITAF-208ENST00000571627 TAF1P21675 1872 aa18.76■□□□□ 0.59
LITAF-208ENST00000571627 GOLGA2Q08379 1002 aa18.76■□□□□ 0.59
LITAF-208ENST00000571627 RIC3Q7Z5B4 369 aa18.76■□□□□ 0.59
LITAF-208ENST00000571627 HCLS1P14317 486 aaPredicted RBP18.75■□□□□ 0.59
LITAF-208ENST00000571627 ALDH1B1P30837 517 aa18.75■□□□□ 0.59
LITAF-208ENST00000571627 C1QTNF8P60827 252 aa18.75■□□□□ 0.59
LITAF-208ENST00000571627 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
LITAF-208ENST00000571627 ISCA1Q9BUE6 129 aa18.75■□□□□ 0.59
LITAF-208ENST00000571627 TAOK3Q9H2K8 898 aa18.75■□□□□ 0.59
LITAF-208ENST00000571627 RNF123Q5XPI4 1314 aa18.74■□□□□ 0.59
LITAF-208ENST00000571627 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
LITAF-208ENST00000571627 SLC10A5Q5PT55 438 aa18.74■□□□□ 0.59
LITAF-208ENST00000571627 SOGA3Q5TF21 947 aa18.74■□□□□ 0.59
LITAF-208ENST00000571627 NMRK2Q9NPI5 230 aa18.74■□□□□ 0.59
LITAF-208ENST00000571627 SH3TC1Q8TE82 1336 aa18.74■□□□□ 0.59
LITAF-208ENST00000571627 LTBP3Q9NS15 1303 aa18.74■□□□□ 0.59
LITAF-208ENST00000571627 HOXA10P31260 410 aaPredicted RBP18.73■□□□□ 0.59
LITAF-208ENST00000571627 EXOSC9Q06265 439 aaKnown RBP18.73■□□□□ 0.59
LITAF-208ENST00000571627 NLRP3Q96P20 1036 aa18.73■□□□□ 0.59
LITAF-208ENST00000571627 STK31Q9BXU1 1019 aa18.73■□□□□ 0.59
LITAF-208ENST00000571627 CACNA1FO60840 1977 aa18.73■□□□□ 0.59
LITAF-208ENST00000571627 KIF3CO14782 793 aa18.72■□□□□ 0.59
LITAF-208ENST00000571627 RTL5Q5HYW3 569 aaPredicted RBP18.72■□□□□ 0.59
LITAF-208ENST00000571627 RBM17Q96I25 401 aaKnown RBP18.72■□□□□ 0.59
LITAF-208ENST00000571627 MYD88Q99836 296 aa18.72■□□□□ 0.59
LITAF-208ENST00000571627 CHMP4AQ9BY43 222 aa18.72■□□□□ 0.59
LITAF-208ENST00000571627 G2E3Q7L622 706 aa18.71■□□□□ 0.59
LITAF-208ENST00000571627 FAM89AQ96GI7 184 aa18.71■□□□□ 0.59
LITAF-208ENST00000571627 SNED1Q8TER0 1413 aa18.71■□□□□ 0.59
LITAF-208ENST00000571627 ZC3H4Q9UPT8 1303 aaKnown RBP18.71■□□□□ 0.59
LITAF-208ENST00000571627 PPEF1O14829 653 aaPredicted RBP18.7■□□□□ 0.58
LITAF-208ENST00000571627 DDX58O95786 925 aaKnown RBP18.7■□□□□ 0.58
LITAF-208ENST00000571627 CRAMP1Q96RY5 1269 aa18.7■□□□□ 0.58
LITAF-208ENST00000571627 MAP3K2Q9Y2U5 619 aa18.7■□□□□ 0.58
LITAF-208ENST00000571627 ABCC4O15439 1325 aa18.7■□□□□ 0.58
LITAF-208ENST00000571627 ZNF521Q96K83 1311 aa18.7■□□□□ 0.58
LITAF-208ENST00000571627 VAMP4O75379 141 aa18.69■□□□□ 0.58
LITAF-208ENST00000571627 SLC4A2P04920 1241 aa18.69■□□□□ 0.58
LITAF-208ENST00000571627 FKBP4Q02790 459 aaKnown RBP eCLIP18.69■□□□□ 0.58
LITAF-208ENST00000571627 METTL22Q9BUU2 404 aaPredicted RBP18.69■□□□□ 0.58
LITAF-208ENST00000571627 MYH16Q9H6N6 1097 aa18.69■□□□□ 0.58
LITAF-208ENST00000571627 ZNF277Q9NRM2 450 aaPredicted RBP18.69■□□□□ 0.58
LITAF-208ENST00000571627 KDM2BQ8NHM5 1336 aa18.69■□□□□ 0.58
LITAF-208ENST00000571627 PI4KAP2A4QPH2 592 aa18.68■□□□□ 0.58
LITAF-208ENST00000571627 TRIM28Q13263 835 aaKnown RBP18.68■□□□□ 0.58
LITAF-208ENST00000571627 RTKN2Q8IZC4 609 aa18.68■□□□□ 0.58
LITAF-208ENST00000571627 PI4KAP1Q8N8J0 262 aa18.68■□□□□ 0.58
LITAF-208ENST00000571627 COL4A1P02462 1669 aa18.68■□□□□ 0.58
LITAF-208ENST00000571627 KSR2Q6VAB6 950 aa18.67■□□□□ 0.58
LITAF-208ENST00000571627 JARID2Q92833 1246 aaPredicted RBP18.67■□□□□ 0.58
LITAF-208ENST00000571627 GLTPD2A6NH11 291 aa18.66■□□□□ 0.58
LITAF-208ENST00000571627 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
LITAF-208ENST00000571627 MIER1Q8N108 512 aa18.66■□□□□ 0.58
LITAF-208ENST00000571627 RRAGCQ9HB90 399 aa18.66■□□□□ 0.58
LITAF-208ENST00000571627 FLIIQ13045 1269 aa18.65■□□□□ 0.58
LITAF-208ENST00000571627 DDX46Q7L014 1031 aaKnown RBP18.65■□□□□ 0.58
LITAF-208ENST00000571627 ZBTB38Q8NAP3 1195 aaPredicted RBP18.65■□□□□ 0.58
LITAF-208ENST00000571627 CCDC191Q8NCU4 936 aa18.65■□□□□ 0.58
LITAF-208ENST00000571627 CWC25Q9NXE8 425 aaPredicted RBP18.65■□□□□ 0.58
LITAF-208ENST00000571627 COL4A5P29400 1685 aa18.65■□□□□ 0.58
LITAF-208ENST00000571627 LRRC37AA6NMS7 1700 aa18.64■□□□□ 0.57
LITAF-208ENST00000571627 WDR90Q96KV7 1748 aa18.64■□□□□ 0.57
LITAF-208ENST00000571627 IGKV5-2P06315 115 aa18.64■□□□□ 0.57
LITAF-208ENST00000571627 IARSP41252 1262 aaKnown RBP18.64■□□□□ 0.57
LITAF-208ENST00000571627 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
LITAF-208ENST00000571627 PSMD1Q99460 953 aa18.64■□□□□ 0.57
LITAF-208ENST00000571627 MYH3P11055 1940 aa18.64■□□□□ 0.57
LITAF-208ENST00000571627 FKBP5Q13451 457 aaPredicted RBP18.63■□□□□ 0.57
LITAF-208ENST00000571627 CWF19L2Q2TBE0 894 aaKnown RBP18.63■□□□□ 0.57
LITAF-208ENST00000571627 ATP6V0A2Q9Y487 856 aa18.63■□□□□ 0.57
LITAF-208ENST00000571627 PCCAP05165 728 aaPredicted RBP18.62■□□□□ 0.57
LITAF-208ENST00000571627 GRAPQ13588 217 aa18.62■□□□□ 0.57
LITAF-208ENST00000571627 SF3B3Q15393 1217 aaKnown RBP18.62■□□□□ 0.57
LITAF-208ENST00000571627 GRAPLQ8TC17 118 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms